Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 9.8e-96 353.6 196 100.0
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 1.0e-92 343.6 196 96.4
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.5e-91 339.7 196 95.9
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 4.2e-91 338.2 196 95.4
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 1.6e-85 319.7 196 91.8
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 3.6e-82 308.5 196 86.2
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 4.0e-81 305.1 196 89.3
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 2.0e-77 292.7 204 80.9
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 3.3e-75 285.4 204 80.9
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 9.5e-75 283.9 204 81.4
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 2.8e-74 282.3 204 80.4
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 2.8e-74 282.3 204 80.4
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 6.2e-74 281.2 204 80.4
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 6.2e-74 281.2 204 80.4
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 6.2e-74 281.2 204 80.4
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 6.2e-74 281.2 204 80.4
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 6.2e-74 281.2 204 80.4
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 8.0e-74 280.8 204 79.9
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 4.4e-72 275.0 205 79.5
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 1.1e-70 270.4 196 79.6
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 8.1e-66 254.2 192 77.1
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 6.6e-60 234.6 200 71.5
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 1.4e-57 226.9 194 72.2
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 4.0e-57 225.3 194 72.2
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 2.9e-55 219.2 201 71.6
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 3.8e-55 218.8 194 70.1
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 2.4e-46 189.5 207 57.0
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 7.1e-46 188.0 203 59.6
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 2.7e-45 186.0 211 56.4
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 7.8e-45 184.5 197 56.9
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 7.8e-45 184.5 209 56.5
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 7.8e-45 184.5 207 58.9
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 1.3e-44 183.7 206 54.4
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 3.0e-44 182.6 207 53.6
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 3.9e-44 182.2 211 54.5
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 3.9e-44 182.2 208 56.2
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 5.1e-44 181.8 211 55.5
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 6.6e-44 181.4 204 57.4
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 6.6e-44 181.4 204 56.9
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 8.7e-44 181.0 208 56.2
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 8.7e-44 181.0 210 55.2
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 3.3e-43 179.1 209 59.3
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.3e-43 179.1 209 59.3
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 4.3e-43 178.7 201 56.7
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 4.3e-43 178.7 203 58.1
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 4.3e-43 178.7 190 57.9
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 5.6e-43 178.3 201 57.2
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.6e-43 178.3 208 59.6
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 7.3e-43 177.9 210 57.1
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 9.6e-43 177.6 210 56.2
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 9.6e-43 177.6 208 54.8
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 1.3e-42 177.2 204 55.4
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 1.3e-42 177.2 210 53.8
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 1.6e-42 176.8 205 57.1
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 2.1e-42 176.4 205 56.1
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 3.6e-42 175.6 212 55.7
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.6e-42 175.6 208 58.7
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 3.6e-42 175.6 208 58.7
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 3.6e-42 175.6 206 55.8
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 6.2e-42 174.9 202 56.9
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 6.2e-42 174.9 208 54.3
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 1.1e-41 174.1 212 55.7
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.1e-41 174.1 202 54.0
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 1.4e-41 173.7 210 54.3
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 1.4e-41 173.7 210 53.8
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 1.4e-41 173.7 207 53.1
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 2.4e-41 172.9 198 59.1
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 2.4e-41 172.9 192 57.8
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 2.4e-41 172.9 192 57.8
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 2.4e-41 172.9 210 55.7
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 3.1e-41 172.6 194 59.8
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 4.0e-41 172.2 203 57.6
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 4.0e-41 172.2 212 57.5
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 5.3e-41 171.8 208 58.2
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 5.3e-41 171.8 192 57.3
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 5.3e-41 171.8 202 55.4
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 5.3e-41 171.8 207 55.1
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 6.9e-41 171.4 209 52.6
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 6.9e-41 171.4 196 60.2
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 9.0e-41 171.0 207 55.1
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 9.0e-41 171.0 211 53.6
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 1.5e-40 170.2 199 56.3
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 2.0e-40 169.9 204 54.9
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 2.0e-40 169.9 204 53.4
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 2.0e-40 169.9 200 55.5
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 2.6e-40 169.5 203 57.1
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 3.4e-40 169.1 206 53.9
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 3.4e-40 169.1 205 56.1
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 4.5e-40 168.7 212 53.3
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 5.8e-40 168.3 199 57.8
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 5.8e-40 168.3 211 52.6
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 5.8e-40 168.3 212 55.7
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 7.6e-40 167.9 199 54.3
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 9.9e-40 167.5 201 57.7
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 9.9e-40 167.5 210 52.9
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 9.9e-40 167.5 212 53.8
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 1.3e-39 167.2 202 54.5
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 1.3e-39 167.2 206 54.4
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 2.2e-39 166.4 182 57.1
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 2.2e-39 166.4 212 52.8
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 2.2e-39 166.4 209 51.7
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 2.9e-39 166.0 186 59.7
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 2.9e-39 166.0 207 53.6
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 2.9e-39 166.0 204 57.4
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 2.9e-39 166.0 212 53.3
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 4.9e-39 165.2 183 54.6
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 4.9e-39 165.2 207 54.6
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 4.9e-39 165.2 212 53.3
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 4.9e-39 165.2 204 54.4
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 4.9e-39 165.2 209 54.1
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 8.4e-39 164.5 210 53.8
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 1.4e-38 163.7 208 52.9
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.4e-38 163.7 204 52.9
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 1.4e-38 163.7 207 55.1
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 1.9e-38 163.3 202 51.0
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 1.9e-38 163.3 201 55.2
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.4e-38 162.9 223 52.5
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 2.4e-38 162.9 212 53.3
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 3.2e-38 162.5 217 54.4
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 3.2e-38 162.5 207 54.6
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 5.4e-38 161.8 206 54.9
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 7.1e-38 161.4 213 53.5
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 1.2e-37 160.6 208 52.4
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 2.1e-37 159.8 206 52.9
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 7.9e-37 157.9 193 56.0
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 7.9e-37 157.9 164 60.4
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 6.7e-36 154.8 180 54.4
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 1.1e-35 154.1 204 52.0
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 1.9e-35 153.3 214 51.4
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 2.5e-35 152.9 214 51.4
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 9.0e-33 144.4 211 50.7
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 4.5e-32 142.1 152 55.3
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 9.9e-32 141.0 169 55.0
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 2.2e-31 139.8 153 56.9
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 1.6e-29 133.7 143 56.6
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 1.6e-29 133.7 117 64.1
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 9.6e-27 124.4 149 49.7
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.6e-26 123.6 149 49.0
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.8e-26 122.9 150 49.3
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 4.8e-26 122.1 177 50.8
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 6.9e-25 118.2 154 48.7
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 6.9e-25 118.2 188 47.9
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 2.6e-24 116.3 144 52.1
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 1.3e-23 114.0 178 47.2
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 2.5e-19 99.8 179 38.5
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 7.4e-19 98.2 147 43.5
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 1.6e-18 97.1 143 48.3
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 3.1e-17 92.8 199 41.7
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 4.5e-16 89.0 165 43.6
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 1.7e-15 87.0 78 64.1
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 4.2e-14 82.4 127 41.7
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.2e-13 80.9 96 56.2
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 1.8e-12 77.0 118 44.9
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 2.3e-12 76.6 124 46.0
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 2.0e-11 73.6 145 42.1
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 7.4e-11 71.6 136 42.6
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.8e-10 69.7 66 62.1
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.8e-10 69.7 60 65.0
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 7.7e-08 61.6 103 36.9
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 8.5e-07 58.2 137 35.8


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