Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 8.0e-98 360.5 197 100.0
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 1.0e-92 343.6 195 96.4
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 1.0e-92 343.6 195 96.4
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 1.2e-88 330.1 195 93.8
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 1.2e-88 330.1 195 93.8
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 2.7e-85 318.9 196 92.3
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 1.1e-81 307.0 195 88.7
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 1.5e-80 303.1 196 87.8
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 1.5e-80 303.1 195 88.2
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 1.5e-80 303.1 195 88.7
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 2.6e-80 302.4 195 88.2
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 2.6e-80 302.4 195 88.2
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 9.9e-80 300.4 195 87.2
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 5.4e-78 294.7 196 86.2
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 8.9e-73 277.3 195 81.5
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 4.4e-72 275.0 196 81.6
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.3e-71 273.5 196 81.6
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 4.2e-70 268.5 196 80.1
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 1.6e-69 266.5 196 79.6
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 5.6e-67 258.1 196 79.1
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 8.1e-66 254.2 195 75.4
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 1.3e-63 246.9 195 74.9
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 1.3e-55 220.3 196 68.4
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 1.2e-53 213.8 195 67.7
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 1.8e-52 209.9 195 65.6
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 8.1e-50 201.1 195 63.6
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 3.8e-47 192.2 202 57.4
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 7.1e-46 188.0 203 56.7
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 1.2e-45 187.2 198 59.1
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.6e-45 186.8 203 55.7
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 1.6e-45 186.8 194 61.3
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.6e-45 186.8 194 61.3
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 2.1e-45 186.4 198 57.1
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 4.6e-45 185.3 192 57.3
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 1.0e-44 184.1 200 59.5
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 1.3e-44 183.7 200 57.5
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 1.8e-44 183.3 198 56.1
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 2.3e-44 183.0 187 61.5
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 2.3e-44 183.0 208 54.3
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 5.1e-44 181.8 213 54.9
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 5.1e-44 181.8 200 58.0
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 6.7e-44 181.4 202 57.4
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 8.7e-44 181.0 192 57.8
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 1.1e-43 180.6 199 57.8
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.1e-43 180.6 194 60.8
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.5e-43 180.3 194 60.3
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.5e-43 180.3 194 60.3
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 1.5e-43 180.3 192 57.8
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 1.9e-43 179.9 198 57.1
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 2.5e-43 179.5 202 56.4
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 2.5e-43 179.5 202 57.4
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 3.3e-43 179.1 202 55.9
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 4.3e-43 178.7 182 60.4
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 7.4e-43 177.9 196 57.7
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 7.4e-43 177.9 201 57.7
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 1.3e-42 177.2 206 53.9
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 1.3e-42 177.2 199 55.8
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 1.3e-42 177.2 192 58.3
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 1.6e-42 176.8 196 57.1
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 1.6e-42 176.8 196 57.1
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 1.6e-42 176.8 191 57.6
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 2.1e-42 176.4 207 54.6
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 2.1e-42 176.4 195 56.4
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.1e-42 176.4 194 59.8
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 2.1e-42 176.4 210 55.7
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 2.8e-42 176.0 176 59.7
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 2.8e-42 176.0 204 54.4
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 2.8e-42 176.0 199 54.8
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 2.8e-42 176.0 200 57.5
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 3.7e-42 175.6 196 56.6
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 3.7e-42 175.6 200 52.0
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 8.2e-42 174.5 205 54.6
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 1.1e-41 174.1 190 56.8
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 1.1e-41 174.1 203 56.7
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 1.4e-41 173.7 199 57.8
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 1.8e-41 173.3 206 57.3
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 1.8e-41 173.3 197 56.9
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 1.8e-41 173.3 180 60.6
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 2.4e-41 172.9 191 55.5
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 3.1e-41 172.6 177 62.1
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 3.1e-41 172.6 206 56.3
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 4.0e-41 172.2 192 53.6
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 4.0e-41 172.2 196 56.6
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 1.2e-40 170.6 181 60.2
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 1.2e-40 170.6 193 56.5
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 1.2e-40 170.6 198 56.1
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 1.2e-40 170.6 200 55.5
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 1.5e-40 170.2 191 56.5
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 2.0e-40 169.9 204 53.9
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 2.0e-40 169.9 185 55.1
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 2.0e-40 169.9 203 56.2
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 2.0e-40 169.9 205 55.6
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 2.6e-40 169.5 205 54.1
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 3.4e-40 169.1 181 55.8
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 3.4e-40 169.1 200 55.5
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 3.4e-40 169.1 197 55.3
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 4.5e-40 168.7 202 56.9
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 4.5e-40 168.7 177 60.5
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 5.8e-40 168.3 197 56.9
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 7.6e-40 167.9 200 56.0
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 1.0e-39 167.5 185 60.0
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.3e-39 167.2 199 54.3
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 1.3e-39 167.2 207 54.6
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.3e-39 167.2 196 53.6
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.7e-39 166.8 200 56.0
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 2.9e-39 166.0 209 52.2
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 2.9e-39 166.0 192 56.2
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 2.9e-39 166.0 185 57.3
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 5.0e-39 165.2 207 52.7
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 5.0e-39 165.2 199 54.3
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 5.0e-39 165.2 189 55.6
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 6.5e-39 164.9 202 51.5
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 8.4e-39 164.5 165 62.4
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 1.1e-38 164.1 202 51.5
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 1.4e-38 163.7 196 55.6
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 2.5e-38 162.9 159 59.7
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 4.2e-38 162.2 197 52.3
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 7.1e-38 161.4 213 51.2
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 7.1e-38 161.4 194 54.1
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 7.1e-38 161.4 199 53.3
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 9.3e-38 161.0 195 53.3
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 2.1e-37 159.8 186 55.9
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 3.5e-37 159.1 198 52.0
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 4.6e-37 158.7 207 52.7
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 6.1e-37 158.3 197 54.8
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 7.9e-37 157.9 207 52.2
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 1.3e-36 157.1 186 53.8
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 6.7e-36 154.8 180 53.3
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 1.5e-35 153.7 209 52.6
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 5.7e-35 151.8 210 52.9
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 2.8e-34 149.4 116 68.1
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 5.3e-33 145.2 205 52.2
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 7.7e-32 141.4 157 54.1
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 6.5e-31 138.3 149 56.4
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 9.4e-30 134.4 210 46.2
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 1.2e-29 134.0 163 51.5
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 1.5e-27 127.1 152 52.0
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 5.7e-27 125.2 179 50.3
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 2.2e-26 123.2 153 47.7
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.1e-25 120.9 183 43.7
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 1.4e-25 120.6 170 48.2
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 5.3e-25 118.6 153 46.4
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 1.5e-24 117.1 191 47.1
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 7.2e-22 108.2 159 45.3
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 6.1e-21 105.1 147 49.0
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 2.6e-19 99.8 211 39.3
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 4.4e-19 99.0 198 40.4
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 8.2e-18 94.7 138 45.7
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 5.3e-17 92.0 172 44.2
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 3.8e-15 85.9 153 44.4
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 7.2e-14 81.6 131 42.0
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 1.2e-13 80.9 81 56.8
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 1.8e-12 77.0 92 52.2
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 2.3e-12 76.6 125 45.6
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 5.2e-12 75.5 114 46.5
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.5e-11 73.9 66 60.6
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.4e-11 72.4 64 60.9
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 5.7e-11 72.0 118 42.4
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 1.2e-08 64.3 146 34.9
Cre10.g452100 Chlamydomonas reinhardtii HOM05D004549 ORTHO05D005390 1.1e-06 57.8 191 30.4


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