Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC08g43886 Brassica carinata HOM05D005620 ORTHO05D002193 6.7e-46 187.2 108 100.0
BcaC08g46010 Brassica carinata HOM05D005620 ORTHO05D002193 7.1e-40 167.2 104 93.3
BcaB01g03467 Brassica carinata HOM05D005620 ORTHO05D002193 2.2e-33 145.6 109 81.7
BolC6t36428H Brassica oleracea HOM05D005620 ORTHO05D002193 2.2e-33 145.6 83 100.0
Sp4g23730 Schrenkiella parvula HOM05D005620 ORTHO05D002193 7.2e-32 140.6 109 78.9
C03p27780 Brassica napus HOM05D005620 ORTHO05D002193 3.0e-30 135.2 110 80.0
A03p23280 Brassica napus HOM05D005620 ORTHO05D002193 3.7e-28 128.3 107 75.7
Thhalv10016487m.g Eutrema salsugineum HOM05D005620 ORTHO05D002193 9.1e-27 123.6 95 74.7
BcaC01g05336 Brassica carinata HOM05D005620 ORTHO05D002193 7.7e-26 120.6 99 78.8
CARHR136580 Cardamine hirsuta HOM05D005620 ORTHO05D002193 8.5e-25 117.1 107 67.3
BraA03t11547Z Brassica rapa HOM05D005620 ORTHO05D002193 2.5e-24 115.5 100 74.0
BolC3t15148H Brassica oleracea HOM05D005620 ORTHO05D002193 7.9e-23 110.5 97 75.3
AL4G39540 Arabidopsis lyrata HOM05D005620 ORTHO05D002193 1.4e-22 109.8 109 65.1
BcaC04g23830 Brassica carinata HOM05D005620 ORTHO05D002193 5.1e-22 107.8 71 84.5
AT2G41460 Arabidopsis thaliana HOM05D005620 ORTHO05D002193 6.7e-22 107.5 109 62.4
Carub.0004s2376 Capsella rubella HOM05D005620 ORTHO05D002193 2.8e-20 102.1 111 64.9
A04p31630 Brassica napus HOM05D005620 ORTHO05D002193 9.1e-19 97.1 105 61.0
Aa31LG1G23480 Aethionema arabicum HOM05D005620 ORTHO05D002193 5.2e-14 81.3 98 57.1
BraA04t18621Z Brassica rapa HOM05D005620 ORTHO05D002193 1.1e-11 73.6 107 52.3
BolC4t28403H Brassica oleracea HOM05D005620 ORTHO05D002193 3.1e-11 72.0 94 55.3
C04p69060 Brassica napus HOM05D005620 ORTHO05D002193 4.1e-11 71.6 100 52.0
THA.LOC104803289 Tarenaya hassleriana HOM05D002000 ORTHO05D002027 2.5e-08 62.4 107 43.0
BolC6t38905H Brassica oleracea HOM05D005620 ORTHO05D104870 1.0e-06 57.0 108 45.4


User provided reference genes

Program Settings