Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38232 Brassica carinata HOM05D004147 ORTHO05D005606 1.7e-63 246.1 154 100.0
BcaC07g39671 Brassica carinata HOM05D004147 ORTHO05D005606 2.6e-59 232.3 154 95.5
BolC2t11193H Brassica oleracea HOM05D004147 ORTHO05D005606 9.8e-59 230.3 154 96.1
BraA05t19995Z Brassica rapa HOM05D004147 ORTHO05D018802 1.3e-58 229.9 151 95.4
A03p64870 Brassica napus HOM05D004147 ORTHO05D005606 6.3e-58 227.6 154 94.8
BraA03t15549Z Brassica rapa HOM05D004147 ORTHO05D018802 2.3e-52 209.1 151 89.4
BraA09t36212Z Brassica rapa HOM05D004147 ORTHO05D018802 1.2e-51 206.8 147 91.2
BolC5t32093H Brassica oleracea HOM05D004147 ORTHO05D021856 2.4e-49 199.1 138 95.7
C05p33620 Brassica napus HOM05D004147 ORTHO05D021856 2.7e-48 195.7 138 94.9
C08p28370 Brassica napus HOM05D004147 ORTHO05D021856 4.6e-48 194.9 138 92.8
BolC8t50447H Brassica oleracea HOM05D004147 ORTHO05D021856 4.6e-48 194.9 138 92.8
BcaC03g17178 Brassica carinata HOM05D004147 ORTHO05D021856 3.0e-47 192.2 138 93.5
C02p30750 Brassica napus HOM05D004147 ORTHO05D021856 1.1e-46 190.3 138 93.5
Sp4g14490 Schrenkiella parvula HOM05D004147 ORTHO05D005606 6.6e-31 137.9 155 51.0
C04p17540 Brassica napus HOM05D004147 ORTHO05D005606 1.1e-30 137.1 155 51.0
BolC4t23301H Brassica oleracea HOM05D004147 ORTHO05D005606 1.1e-30 137.1 155 51.0
BraA05t20280Z Brassica rapa HOM05D004147 ORTHO05D005606 1.5e-30 136.7 155 50.3
CARHR125880 Cardamine hirsuta HOM05D004147 ORTHO05D005606 1.6e-29 133.3 155 51.0
Thhalv10017021m.g Eutrema salsugineum HOM05D004147 ORTHO05D005606 2.1e-29 132.9 155 49.7
Carub.0004s1343 Capsella rubella HOM05D004147 ORTHO05D005606 1.4e-28 130.2 149 52.3
A05p13420 Brassica napus HOM05D004147 ORTHO05D005606 2.4e-28 129.4 155 49.7
Aa31LG5G4940 Aethionema arabicum HOM05D004147 ORTHO05D005606 7.6e-27 124.4 155 47.1
AT2G32080 Arabidopsis thaliana HOM05D004147 ORTHO05D005606 9.3e-25 117.5 155 47.1
AL103U10050 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 4.6e-24 115.2 152 46.7
AL4G27460 Arabidopsis lyrata HOM05D004147 ORTHO05D005606 4.6e-24 115.2 152 46.7
Ciclev10016090m.g Citrus clementina HOM05D004147 ORTHO05D005606 6.6e-23 111.3 155 43.2
Glyma.20G025100 Glycine max HOM05D004147 ORTHO05D005606 1.1e-22 110.5 155 42.6
MSTRG.19397 Avicennia marina HOM05D004147 ORTHO05D005606 2.5e-22 109.4 152 40.1
Psat7g134480 Pisum sativum HOM05D004147 ORTHO05D005606 2.5e-22 109.4 94 61.7
TPR.G34051 Trifolium pratense HOM05D004147 ORTHO05D005606 2.5e-22 109.4 155 41.9
Cc01_g00350 Coffea canephora HOM05D004147 ORTHO05D005606 4.3e-22 108.6 154 42.9
Gohir.D03G147100 Gossypium hirsutum HOM05D004147 ORTHO05D005606 5.6e-22 108.2 155 43.9
Thecc.09G206400 Theobroma cacao HOM05D004147 ORTHO05D005606 5.6e-22 108.2 155 41.9
TWI32G0854 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 5.6e-22 108.2 84 66.7
arahy.Tifrunner.gnm1.ann1.41N8FB Arachis hypogaea HOM05D004147 ORTHO05D005606 7.3e-22 107.8 153 41.2
arahy.Tifrunner.gnm1.ann1.JJ8YPF Arachis hypogaea HOM05D004147 ORTHO05D005606 7.3e-22 107.8 153 41.2
COL.COLO4_35060 Corchorus olitorius HOM05D004147 ORTHO05D005606 7.3e-22 107.8 155 41.9
Oeu023957.1 Olea europaea HOM05D004147 ORTHO05D005606 7.3e-22 107.8 155 41.9
VMungo0251G0902 Vigna mungo HOM05D004147 ORTHO05D005606 7.3e-22 107.8 155 41.9
Glyma.07G225200 Glycine max HOM05D004147 ORTHO05D005606 9.6e-22 107.5 155 41.9
Phvul.002G101600 Phaseolus vulgaris HOM05D004147 ORTHO05D005606 9.6e-22 107.5 155 41.9
CiPaw.13G180000 Carya illinoinensis HOM05D004147 ORTHO05D005606 1.3e-21 107.1 155 41.9
Ca_18795_v3 Cicer arietinum L. HOM05D004147 ORTHO05D005606 1.3e-21 107.1 155 41.3
QL01p007763 Quercus lobata HOM05D004147 ORTHO05D005606 1.3e-21 107.1 155 41.9
RcHm_v2.0_Chr5g0084131 Rosa chinensis HOM05D004147 ORTHO05D005606 1.3e-21 107.1 155 41.9
Migut.N00528 Erythranthe guttata HOM05D004147 ORTHO05D005606 1.6e-21 106.7 155 41.3
CANSAT35G0441 Cannabis sativa HOM05D004147 ORTHO05D005606 2.1e-21 106.3 155 40.0
ClCG03G014680 Citrullus lanatus HOM05D004147 ORTHO05D005606 2.1e-21 106.3 155 41.9
Duzib150G1508 Durio zibethinus HOM05D004147 ORTHO05D005606 2.1e-21 106.3 154 42.2
MD11G1000500 Malus domestica HOM05D004147 ORTHO05D005606 2.8e-21 105.9 154 41.6
TWI60G0666 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 3.6e-21 105.5 84 61.9
Atru.chr3.2044 Acer truncatum HOM05D004147 ORTHO05D005606 4.8e-21 105.1 155 41.3
Cpa.g.sc119.7 Carica papaya HOM05D004147 ORTHO05D005606 4.8e-21 105.1 155 41.3
MD03G1000100 Malus domestica HOM05D004147 ORTHO05D005606 6.2e-21 104.8 155 41.9
CSS0011494 Camellia sinensis var. sinensis HOM05D004147 ORTHO05D005606 8.1e-21 104.4 155 41.3
Manes.15G111500 Manihot esculenta HOM05D004147 ORTHO05D005606 8.1e-21 104.4 87 63.2
Sabra01G0000600 Salix brachista HOM05D004147 ORTHO05D005606 8.1e-21 104.4 156 41.7
Gohir.A03G021600 Gossypium hirsutum HOM05D004147 ORTHO05D005606 1.1e-20 104.0 156 43.6
Lj4g0017588 Lotus japonicus HOM05D004147 ORTHO05D005606 1.1e-20 104.0 156 41.7
Sc09g0002150 Simmondsia chinensis HOM05D004147 ORTHO05D005606 1.1e-20 104.0 156 41.7
GSVIVG01025513001 Vitis vinifera HOM05D004147 ORTHO05D005606 1.1e-20 104.0 155 41.3
Actinidia00922 Actinidia chinensis HOM05D004147 ORTHO05D005606 1.8e-20 103.2 155 40.6
Potri.001G000700 Populus trichocarpa HOM05D004147 ORTHO05D005606 1.8e-20 103.2 156 41.0
PGR102G2115 Punica granatum HOM05D004147 ORTHO05D005606 1.8e-20 103.2 155 40.0
Rhsim13G0235300 Rhododendron simsii HOM05D004147 ORTHO05D005606 1.8e-20 103.2 155 40.0
FvH4_3g46070 Fragaria vesca HOM05D004147 ORTHO05D005606 2.4e-20 102.8 156 42.3
FAN11G3393 Fragaria x ananassa HOM05D004147 ORTHO05D005606 2.4e-20 102.8 156 42.3
FAN21G1018 Fragaria x ananassa HOM05D004147 ORTHO05D005606 2.4e-20 102.8 156 42.3
Potri.003G224000 Populus trichocarpa HOM05D004147 ORTHO05D005606 3.1e-20 102.4 155 41.3
Sc16g0009630 Simmondsia chinensis HOM05D004147 ORTHO05D005606 3.1e-20 102.4 150 42.0
Gohir.A05G000500 Gossypium hirsutum HOM05D004147 ORTHO05D005606 4.0e-20 102.1 155 41.9
Gohir.D05G000800 Gossypium hirsutum HOM05D004147 ORTHO05D005606 4.0e-20 102.1 154 41.6
Gorai.009G000700 Gossypium raimondii HOM05D004147 ORTHO05D005606 4.0e-20 102.1 154 41.6
SGA_v2.0_scaffold6G03333 Striga asiatica HOM05D000201 ORTHO05D005606 4.0e-20 102.1 154 39.6
MELO3C015560.2 Cucumis melo HOM05D004147 ORTHO05D005606 5.3e-20 101.7 155 40.6
CsaV3_1G041490 Cucumis sativus L. HOM05D004147 ORTHO05D005606 5.3e-20 101.7 155 40.6
Gorai.003G154600 Gossypium raimondii HOM05D004147 ORTHO05D005606 5.3e-20 101.7 156 42.9
Hma1.2p1_0589F.1_g184660 Hydrangea macrophylla HOM05D004147 ORTHO05D005606 5.3e-20 101.7 151 42.4
Medtr4g083230 Medicago truncatula HOM05D004147 ORTHO05D005606 5.3e-20 101.7 155 41.3
TWI34G0273 Tripterygium wilfordii HOM05D004147 ORTHO05D005606 5.3e-20 101.7 83 65.1
Ah.04g161370 Amaranthus hybridus HOM05D004147 ORTHO05D005606 6.9e-20 101.3 156 40.4
FAN16G1044 Fragaria x ananassa HOM05D004147 ORTHO05D005606 6.9e-20 101.3 156 41.7
Dinv09765 Davidia involucrata HOM05D004147 ORTHO05D005606 9.0e-20 100.9 155 40.6
Lalb_Chr09g0328961 Lupinus albus HOM05D004147 ORTHO05D005606 9.0e-20 100.9 154 40.9
Nn2g15911 Nelumbo nucifera HOM05D004147 ORTHO05D005606 9.0e-20 100.9 155 40.6
Hund19733 Selenicereus undatus HOM05D004147 ORTHO05D005606 9.0e-20 100.9 156 41.0
TAR633G2501 Trochodendron aralioides HOM05D004147 ORTHO05D005606 9.0e-20 100.9 149 42.3
Dinv06248 Davidia involucrata HOM05D004147 ORTHO05D005606 1.2e-19 100.5 148 43.2
Dinv15522 Davidia involucrata HOM05D004147 ORTHO05D005606 1.2e-19 100.5 148 43.2
Sabra03G0166400 Salix brachista HOM05D004147 ORTHO05D005606 1.2e-19 100.5 155 40.6
TAR623G0822 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.2e-19 100.5 155 41.3
TAR623G0988 Trochodendron aralioides HOM05D004147 ORTHO05D005606 1.2e-19 100.5 155 41.3
BcaB02g10449 Brassica carinata HOM05D004147 ORTHO05D005606 1.5e-19 100.1 74 74.3
Aqoxy2G00002 Aquilegia oxysepala HOM05D004147 ORTHO05D005606 2.0e-19 99.8 148 41.9
Lalb_Chr16g0385471 Lupinus albus HOM05D004147 ORTHO05D005606 2.0e-19 99.8 152 40.8
PSO541G5718 Papaver somniferum HOM05D004147 ORTHO05D005606 2.6e-19 99.4 155 41.3
PSO675G6472 Papaver somniferum HOM05D004147 ORTHO05D005606 2.6e-19 99.4 155 41.3
Haze_22914 Corylus avellana HOM05D004147 ORTHO05D005606 4.4e-19 98.6 155 40.6
MBI19_g24069_MAGBIO Magnolia biondii HOM05D004147 ORTHO05D005606 4.4e-19 98.6 152 41.4
Sed0015400 Sechium edule HOM05D004147 ORTHO05D005606 4.4e-19 98.6 89 60.7
Prupe.6G000600 Prunus persica HOM05D004147 ORTHO05D005606 5.8e-19 98.2 156 41.0
SGA_v2.0_scaffold3G01703 Striga asiatica HOM05D004147 ORTHO05D005606 5.8e-19 98.2 152 38.8
Actinidia16222 Actinidia chinensis HOM05D000201 ORTHO05D001601 9.9e-19 97.4 87 60.9
MSTRG.5958 Avicennia marina HOM05D004147 ORTHO05D005606 1.3e-18 97.1 155 38.7
Duzib170G0806 Durio zibethinus HOM05D004147 ORTHO05D005606 1.3e-18 97.1 154 40.3
PSO384G4999 Papaver somniferum HOM05D004147 ORTHO05D005606 1.3e-18 97.1 156 37.8
Sed0000702 Sechium edule HOM05D004147 ORTHO05D005606 1.3e-18 97.1 87 59.8
CDE09G0171 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.7e-18 96.7 155 38.1
AUR62040894 Chenopodium quinoa HOM05D004147 ORTHO05D005606 2.2e-18 96.3 88 60.2
AUR62042623 Chenopodium quinoa HOM05D004147 ORTHO05D005606 2.2e-18 96.3 88 60.2
EL10Ac4g10393 Beta vulgaris HOM05D004147 ORTHO05D005606 2.9e-18 95.9 154 38.3
ATR0068G003 Amborella trichopoda HOM05D004147 ORTHO05D005606 4.9e-18 95.1 155 37.4
PSO339G2679 Papaver somniferum HOM05D004147 ORTHO05D005606 4.9e-18 95.1 156 37.8
Sopen01g025520 Solanum pennellii HOM05D004147 ORTHO05D005606 4.9e-18 95.1 153 39.2
DCAR_001959 Daucus carota HOM05D004147 ORTHO05D005606 6.4e-18 94.7 155 38.1
SalBow3G0983 Salvia bowleyana HOM05D004147 ORTHO05D005606 8.4e-18 94.4 152 39.5
Solyc01g049680.3 Solanum lycopersicum HOM05D004147 ORTHO05D005606 8.4e-18 94.4 153 39.2
vmacro04279 Vaccinium macrocarpon HOM05D004147 ORTHO05D005606 8.4e-18 94.4 149 40.9
Peaxi162Scf01181g00019 Petunia axillaris HOM05D004147 ORTHO05D005606 1.4e-17 93.6 153 39.9
CAN.G1941.2 Capsicum annuum HOM05D004147 ORTHO05D005606 4.2e-17 92.0 152 38.8
Zm00001eb127970 Zea mays HOM05D004147 ORTHO05D005606 4.2e-17 92.0 147 40.1
Os01g0260700 Oryza sativa ssp. japonica HOM05D004147 ORTHO05D005606 5.4e-17 91.7 147 40.1
CDE08G0994 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 9.3e-17 90.9 155 37.4
unitig_52.g17528 Utricularia gibba HOM05D004147 ORTHO05D005606 1.2e-16 90.5 155 37.4
Zm00001eb333400 Zea mays HOM05D004147 ORTHO05D005606 1.2e-16 90.5 85 58.8
unitig_62.g23531 Utricularia gibba HOM05D004147 ORTHO05D005606 2.1e-16 89.7 143 38.5
HPP92_018009 Vanilla planifolia HOM05D004147 ORTHO05D005606 2.1e-16 89.7 156 38.5
CAN.G281.7 Capsicum annuum HOM05D004147 ORTHO05D005606 2.7e-16 89.4 150 37.3
Eucgr.J01722 Eucalyptus grandis HOM05D004147 ORTHO05D005606 6.0e-16 88.2 89 59.6
Lsat_1_v5_gn_2_50601 Lactuca sativa HOM05D004147 ORTHO05D005606 6.0e-16 88.2 158 37.3
Lj1A564T30 Lonicera japonica HOM05D004147 ORTHO05D005606 1.7e-15 86.7 165 37.6
Nitab4.5_0000075g0060 Nicotiana tabacum HOM05D004147 ORTHO05D005606 3.9e-15 85.5 151 37.7
Nitab4.5_0000890g0080 Nicotiana tabacum HOM05D004147 ORTHO05D005606 3.9e-15 85.5 151 37.7
ECA238G2098 Erigeron canadensis HOM05D004147 ORTHO05D005606 1.5e-14 83.6 164 35.4
HanXRQChr14g0437101 Helianthus annuus HOM05D004147 ORTHO05D005606 1.9e-14 83.2 161 36.6
CDE08G0894 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 3.3e-14 82.4 87 52.9
CDE02G0470 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.3e-13 80.5 85 49.4
CDE02G2463 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 2.1e-13 79.7 153 32.0
Sabra01G0000400 Salix brachista HOM05D004147 ORTHO05D005606 1.3e-10 70.5 133 36.8
AagrBONN_evm.TU.Sc2ySwM_368.1732 Anthoceros agrestis HOM05D004147 ORTHO05D005606 2.4e-09 66.2 89 46.1
Nn7g35773 Nelumbo nucifera HOM05D004147 ORTHO05D005606 5.5e-09 65.1 101 39.6
Gorai.009G000600 Gossypium raimondii HOM05D004147 ORTHO05D005606 7.1e-09 64.7 98 39.8
Oeu023697.1 Olea europaea HOM05D004147 ORTHO05D005606 7.1e-09 64.7 99 37.4
Pp3c17_4780 Physcomitrium patens HOM05D004147 ORTHO05D005606 1.2e-08 63.9 106 36.8
Lj1A564T31 Lonicera japonica HOM05D004147 ORTHO05D005606 1.6e-08 63.5 99 37.4
unitig_52.g17527 Utricularia gibba HOM05D004147 ORTHO05D005606 1.6e-08 63.5 98 37.8
FAN25G3109 Fragaria x ananassa HOM05D004147 ORTHO05D005606 7.9e-08 61.2 90 40.0
MBI05_g14947_MAGBIO Magnolia biondii HOM05D000130 ORTHO05D002599 1.0e-07 60.8 106 36.8
CDE04G0726 Ceratophyllum demersum HOM05D004147 ORTHO05D005606 1.3e-07 60.5 107 33.6
Pp3c14_13490 Physcomitrium patens HOM05D004147 ORTHO05D005606 1.8e-07 60.1 85 37.6
SEGI_18063 Sequoiadendron giganteum HOM05D004147 ORTHO05D005606 1.8e-07 60.1 91 37.4
Solyc01g049690.4 Solanum lycopersicum HOM05D004147 ORTHO05D005606 1.8e-07 60.1 90 38.9
HPP92_026678 Vanilla planifolia HOM05D004147 ORTHO05D005606 6.7e-07 58.2 98 36.7
SMO164G0008 Selaginella moellendorffii HOM05D004147 ORTHO05D005606 8.7e-07 57.8 98 37.8
CAN.G640.3 Capsicum annuum HOM05D004147 ORTHO05D005606 2.5e-06 56.2 90 37.8
CBR_g3650 Chara braunii HOM05D004147 ORTHO05D005606 2.5e-06 56.2 99 34.3
Sabra01G0000300 Salix brachista HOM05D004147 ORTHO05D005606 3.3e-06 55.8 97 35.1


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