Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC06g33244 Brassica carinata HOM05D002248 ORTHO05D006007 4.1e-34 147.5 75 100.0
BcaC06g33246 Brassica carinata HOM05D002248 ORTHO05D006007 1.4e-23 112.5 56 96.4
C07p45030 Brassica napus HOM05D002248 ORTHO05D006007 1.4e-23 112.5 56 96.4
BolC7t45026H Brassica oleracea HOM05D002248 ORTHO05D006007 1.4e-23 112.5 56 96.4
A03p46990 Brassica napus HOM05D002248 ORTHO05D006007 3.2e-23 111.3 56 94.6
BraA03t13823Z Brassica rapa HOM05D002248 ORTHO05D006007 3.2e-23 111.3 56 94.6
CARHR275170 Cardamine hirsuta HOM05D002248 ORTHO05D006007 7.2e-23 110.2 56 94.6
Thhalv10004743m.g Eutrema salsugineum HOM05D002248 ORTHO05D006007 7.2e-23 110.2 56 94.6
Aa31LG11G2010 Aethionema arabicum HOM05D002248 ORTHO05D006007 1.6e-22 109.0 56 92.9
BcaC06g32499 Brassica carinata HOM05D002248 ORTHO05D006007 1.6e-22 109.0 56 92.9
Thhalv10014361m.g Eutrema salsugineum HOM05D002248 ORTHO05D006007 1.6e-22 109.0 56 92.9
BcaC06g32412 Brassica carinata HOM05D002248 ORTHO05D006007 2.1e-22 108.6 56 92.9
A10p29400 Brassica napus HOM05D002248 ORTHO05D006007 2.1e-22 108.6 56 92.9
BraA10t44984Z Brassica rapa HOM05D002248 ORTHO05D006007 2.1e-22 108.6 56 92.9
C09p69780 Brassica napus HOM05D002248 ORTHO05D006007 3.6e-22 107.8 56 92.9
Sp2g24610 Schrenkiella parvula HOM05D002248 ORTHO05D006007 3.6e-22 107.8 56 92.9
Aa31LG3G18750 Aethionema arabicum HOM05D002248 ORTHO05D006007 6.1e-22 107.1 56 91.1
Aqoxy3G03465 Aquilegia oxysepala HOM05D002248 ORTHO05D006007 6.1e-22 107.1 57 89.5
PSO063G4970 Papaver somniferum HOM05D002248 ORTHO05D006007 8.0e-22 106.7 56 91.1
Carub.0008s2208 Capsella rubella HOM05D002248 ORTHO05D006007 1.4e-21 105.9 56 91.1
PSO832G2074 Papaver somniferum HOM05D002248 ORTHO05D006007 1.8e-21 105.5 56 89.3
ClCG04G012110 Citrullus lanatus HOM05D002248 ORTHO05D006007 2.3e-21 105.1 59 84.7
CsaV3_1G005660 Cucumis sativus L. HOM05D002248 ORTHO05D006007 3.0e-21 104.8 57 87.7
BcaC03g18094 Brassica carinata HOM05D002248 ORTHO05D006007 3.9e-21 104.4 56 91.1
Pp3c11_3710 Physcomitrium patens HOM05D002248 ORTHO05D006007 3.9e-21 104.4 54 92.6
Lj4g0007478 Lotus japonicus HOM05D002248 ORTHO05D006007 5.2e-21 104.0 56 89.3
Pp3c7_23810 Physcomitrium patens HOM05D002248 ORTHO05D006007 5.2e-21 104.0 57 87.7
THA.LOC104819409 Tarenaya hassleriana HOM05D002248 ORTHO05D006007 5.2e-21 104.0 56 89.3
Thecc.03G093200 Theobroma cacao HOM05D002248 ORTHO05D006007 5.2e-21 104.0 56 89.3
AL8G38080 Arabidopsis lyrata HOM05D002248 ORTHO05D006007 6.7e-21 103.6 56 89.3
Manes.14G081000 Manihot esculenta HOM05D002248 ORTHO05D006007 6.7e-21 103.6 57 86.0
Sed0022071 Sechium edule HOM05D002248 ORTHO05D006007 6.7e-21 103.6 57 86.0
MELO3C001998.2 Cucumis melo HOM05D002248 ORTHO05D006007 8.8e-21 103.2 57 86.0
Medtr4g108800 Medicago truncatula HOM05D002248 ORTHO05D006007 8.8e-21 103.2 56 89.3
Psat4g049960 Pisum sativum HOM05D002248 ORTHO05D006007 8.8e-21 103.2 56 89.3
Cfa018918 Carpinus fangiana HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Ciclev10021564m.g Citrus clementina HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Duzib068G1160 Durio zibethinus HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Gohir.A07G064400 Gossypium hirsutum HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Gohir.A12G178700 Gossypium hirsutum HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Gohir.D07G069200 Gossypium hirsutum HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Gohir.D12G181300 Gossypium hirsutum HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Gorai.001G072700 Gossypium raimondii HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
PGR083G1762 Punica granatum HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Sabra15G0087200 Salix brachista HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
SEGI_08302 Sequoiadendron giganteum HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
SEGI_18658 Sequoiadendron giganteum HOM05D002248 ORTHO05D006007 1.1e-20 102.8 56 87.5
Duzib084G1435 Durio zibethinus HOM05D002248 ORTHO05D006007 1.5e-20 102.4 56 83.9
Lalb_Chr13g0303101 Lupinus albus HOM05D002248 ORTHO05D006007 1.5e-20 102.4 56 87.5
Manes.06G090100 Manihot esculenta HOM05D002248 ORTHO05D006007 1.5e-20 102.4 57 84.2
CSS0002529 Camellia sinensis var. sinensis HOM05D002248 ORTHO05D006007 2.0e-20 102.1 56 87.5
FvH4_5g14630 Fragaria vesca HOM05D002248 ORTHO05D006007 2.0e-20 102.1 56 87.5
FAN08G3426 Fragaria x ananassa HOM05D002248 ORTHO05D006007 2.0e-20 102.1 56 87.5
FAN13G2216 Fragaria x ananassa HOM05D002248 ORTHO05D006007 2.0e-20 102.1 56 87.5
FAN18G0552 Fragaria x ananassa HOM05D002248 ORTHO05D006007 2.0e-20 102.1 56 87.5
Hma1.2p1_0322F.1_g125080 Hydrangea macrophylla HOM05D002248 ORTHO05D006007 2.0e-20 102.1 57 86.0
RcHm_v2.0_Chr7g0181861 Rosa chinensis HOM05D002248 ORTHO05D006007 2.0e-20 102.1 56 87.5
Actinidia04873 Actinidia chinensis HOM05D002248 ORTHO05D006007 2.6e-20 101.7 56 87.5
AagrBONN_evm.TU.Sc2ySwM_117.3292 Anthoceros agrestis HOM05D002248 ORTHO05D006007 2.6e-20 101.7 56 87.5
Ca_21811_v3 Cicer arietinum L. HOM05D002248 ORTHO05D006007 2.6e-20 101.7 56 87.5
ECA247G3852 Erigeron canadensis HOM05D002248 ORTHO05D006007 2.6e-20 101.7 57 86.0
Sed0004299 Sechium edule HOM05D002248 ORTHO05D006007 2.6e-20 101.7 56 87.5
SGA_v2.0_scaffold25G10930 Striga asiatica HOM05D002248 ORTHO05D006007 2.6e-20 101.7 57 84.2
THA.LOC104801478 Tarenaya hassleriana HOM05D002248 ORTHO05D006007 2.6e-20 101.7 56 87.5
Ah.02g113680 Amaranthus hybridus HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 87.5
AT5G61410 Arabidopsis thaliana HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 87.5
CSS0016834 Camellia sinensis var. sinensis HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 85.7
CANSAT80G1309 Cannabis sativa HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 83.9
CDE02G3947 Ceratophyllum demersum HOM05D002248 ORTHO05D006007 3.3e-20 101.3 53 90.6
Haze_07300 Corylus avellana HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 85.7
Dinv10650 Davidia involucrata HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 87.5
Dinv38738 Davidia involucrata HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 87.5
Prupe.5G197000 Prunus persica HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 87.5
TWI15G0439 Tripterygium wilfordii HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 87.5
TWI60G1545 Tripterygium wilfordii HOM05D002248 ORTHO05D006007 3.3e-20 101.3 56 87.5
Cpa.g.sc111.26 Carica papaya HOM05D002248 ORTHO05D006007 4.4e-20 100.9 56 85.7
Os03g0169100 Oryza sativa ssp. japonica HOM05D002248 ORTHO05D006007 4.4e-20 100.9 57 84.2
Potri.015G062100 Populus trichocarpa HOM05D002248 ORTHO05D006007 4.4e-20 100.9 56 85.7
Glyma.05G025300 Glycine max HOM05D002248 ORTHO05D006007 5.7e-20 100.5 56 85.7
Glyma.17G101700 Glycine max HOM05D002248 ORTHO05D006007 5.7e-20 100.5 56 85.7
Nitab4.5_0005900g0120 Nicotiana tabacum HOM05D002248 ORTHO05D006007 5.7e-20 100.5 56 85.7
Phvul.003G188800 Phaseolus vulgaris HOM05D002248 ORTHO05D006007 5.7e-20 100.5 56 85.7
QL10p017560 Quercus lobata HOM05D002248 ORTHO05D006007 5.7e-20 100.5 56 87.5
PGSC0003DMG400019521 Solanum tuberosum HOM05D002248 ORTHO05D006007 5.7e-20 100.5 56 85.7
VMungo1215G1016 Vigna mungo HOM05D002248 ORTHO05D006007 5.7e-20 100.5 56 85.7
ATR1120G124 Amborella trichopoda HOM05D002248 ORTHO05D006007 7.4e-20 100.1 57 84.2
EL10Ac5g11050 Beta vulgaris HOM05D002248 ORTHO05D006007 7.4e-20 100.1 56 85.7
Migut.I00206 Erythranthe guttata HOM05D002248 ORTHO05D006007 7.4e-20 100.1 56 85.7
HanXRQChr02g0043141 Helianthus annuus HOM05D002248 ORTHO05D006007 7.4e-20 100.1 57 84.2
SMO172G0181 Selaginella moellendorffii HOM05D002248 ORTHO05D006007 7.4e-20 100.1 56 85.7
Actinidia35008 Actinidia chinensis HOM05D002248 ORTHO05D006007 9.7e-20 99.8 56 87.5
CiPaw.11G046800 Carya illinoinensis HOM05D002248 ORTHO05D006007 9.7e-20 99.8 56 83.9
Lalb_Chr12g0196941 Lupinus albus HOM05D002248 ORTHO05D006007 9.7e-20 99.8 53 90.6
arahy.Tifrunner.gnm1.ann1.Q5YJQ9 Arachis hypogaea HOM05D002248 ORTHO05D006007 1.3e-19 99.4 56 85.7
Hund02631 Selenicereus undatus HOM05D002248 ORTHO05D006007 1.3e-19 99.4 56 83.9
Solyc03g115820.3 Solanum lycopersicum HOM05D002248 ORTHO05D006007 1.3e-19 99.4 56 85.7
Cc04_g15130 Coffea canephora HOM05D002248 ORTHO05D006007 1.7e-19 99.0 56 85.7
Eucgr.B00532 Eucalyptus grandis HOM05D002248 ORTHO05D006007 1.7e-19 99.0 56 83.9
MD06G1196800 Malus domestica HOM05D002248 ORTHO05D006007 1.7e-19 99.0 56 85.7
MD14G1203700 Malus domestica HOM05D002248 ORTHO05D006007 1.7e-19 99.0 56 85.7
Pp3c1_8270 Physcomitrium patens HOM05D002248 ORTHO05D006007 1.7e-19 99.0 54 87.0
Nn3g17307 Nelumbo nucifera HOM05D002248 ORTHO05D006007 2.2e-19 98.6 53 90.6
Sopen03g034800 Solanum pennellii HOM05D002248 ORTHO05D006007 2.8e-19 98.2 56 83.9
CSS0047408 Camellia sinensis var. sinensis HOM05D002248 ORTHO05D006007 3.7e-19 97.8 56 83.9
ECA246G4213 Erigeron canadensis HOM05D002248 ORTHO05D006007 3.7e-19 97.8 53 90.6
Nn4g23250 Nelumbo nucifera HOM05D002248 ORTHO05D006007 4.8e-19 97.4 53 88.7
TAR374G0843 Trochodendron aralioides HOM05D002248 ORTHO05D006007 4.8e-19 97.4 56 83.9
Zm00001eb402390 Zea mays HOM05D002248 ORTHO05D006007 6.3e-19 97.1 56 82.1
TAR622G1156 Trochodendron aralioides HOM05D002248 ORTHO05D006007 1.1e-18 96.3 53 88.7
Zm00001eb005330 Zea mays HOM05D002248 ORTHO05D006007 1.1e-18 96.3 53 86.8
MSTRG.23005 Avicennia marina HOM05D002248 ORTHO05D006007 1.4e-18 95.9 56 82.1
HanXRQChr08g0236701 Helianthus annuus HOM05D002248 ORTHO05D006007 1.8e-18 95.5 53 86.8
Lsat_1_v5_gn_5_21561 Lactuca sativa HOM05D002248 ORTHO05D006007 1.8e-18 95.5 53 86.8
Sc04g0002840 Simmondsia chinensis HOM05D002248 ORTHO05D006007 1.8e-18 95.5 56 80.4
CBR_g3855 Chara braunii HOM05D002248 ORTHO05D006007 3.1e-18 94.7 56 80.4
Mapoly0016s0134 Marchantia polymorpha HOM05D002248 ORTHO05D006007 3.1e-18 94.7 56 78.6
unitig_750.g28507 Utricularia gibba HOM05D002248 ORTHO05D006007 1.6e-17 92.4 56 80.4
SalBow5G3171 Salvia bowleyana HOM05D002248 ORTHO05D006007 2.0e-17 92.0 58 81.0
Cre12.g511900 Chlamydomonas reinhardtii HOM05D002248 ORTHO05D006007 4.5e-17 90.9 56 78.6
A02p41690 Brassica napus HOM05D002248 ORTHO05D006007 1.0e-16 89.7 49 89.8
PRCOL_00000587 Prasinoderma coloniale HOM05D002248 ORTHO05D006007 2.9e-16 88.2 53 81.1
arahy.Tifrunner.gnm1.ann1.0GG7BD Arachis hypogaea HOM05D002248 ORTHO05D006007 3.8e-16 87.8 77 62.3
MCO09G233 Micromonas commoda HOM05D002248 ORTHO05D006007 5.0e-16 87.4 54 77.8
Sp6g35190 Schrenkiella parvula HOM05D001764 ORTHO05D001946 6.5e-16 87.0 65 72.3
BcaB07g29823 Brassica carinata HOM05D002248 ORTHO05D006007 8.5e-16 86.7 44 93.2
Lj9A466T75 Lonicera japonica HOM05D002248 ORTHO05D006007 8.5e-16 86.7 44 93.2
AUR62021648 Chenopodium quinoa HOM05D002248 ORTHO05D006007 1.9e-15 85.5 44 93.2
Gorai.008G194500 Gossypium raimondii HOM05D002248 ORTHO05D006007 2.5e-15 85.1 53 77.4
SGA_v2.0_scaffold313G48336 Striga asiatica HOM05D001764 ORTHO05D001946 3.2e-15 84.7 67 64.2
DCAR_016573 Daucus carota HOM05D002248 ORTHO05D006007 5.5e-15 84.0 44 90.9
vmacro17566 Vaccinium macrocarpon HOM05D002248 ORTHO05D006007 5.5e-15 84.0 44 90.9
Atru.chr9.179 Acer truncatum HOM05D002248 ORTHO05D006007 7.2e-15 83.6 42 95.2
CAN.G479.69 Capsicum annuum HOM05D002248 ORTHO05D006007 9.4e-15 83.2 90 53.3
CSS0027332 Camellia sinensis var. sinensis HOM05D002248 ORTHO05D006007 1.6e-14 82.4 44 88.6
Ah.11g048240 Amaranthus hybridus HOM05D000662 ORTHO05D006007 2.1e-14 82.0 44 88.6
Lsat_1_v5_gn_1_14260 Lactuca sativa HOM05D002248 ORTHO05D006007 2.1e-14 82.0 40 97.5
MBI02_g20486_MAGBIO Magnolia biondii HOM05D002248 ORTHO05D006007 2.1e-14 82.0 42 92.9
GSVIVG01007976001 Vitis vinifera HOM05D002248 ORTHO05D006007 2.1e-14 82.0 53 79.2
Eucgr.K02489 Eucalyptus grandis HOM05D002248 ORTHO05D006007 2.7e-14 81.6 45 86.7
Peaxi162Scf00274g00342 Petunia axillaris HOM05D002248 ORTHO05D006007 3.6e-14 81.3 42 92.9
BolC9t59723H Brassica oleracea HOM05D001764 ORTHO05D001946 1.0e-13 79.7 48 85.4
Oeu052448.1 Olea europaea HOM05D002248 ORTHO05D006007 1.0e-13 79.7 40 95.0
BolC2t12217H Brassica oleracea HOM05D002248 ORTHO05D006007 4.4e-12 74.3 35 100.0
Nitab4.5_0001211g0310 Nicotiana tabacum HOM05D002248 ORTHO05D006007 3.1e-10 68.2 48 75.0
C02p61620 Brassica napus HOM05D002248 ORTHO05D041756 1.2e-09 66.2 38 86.8
AUR62008442 Chenopodium quinoa HOM05D002248 ORTHO05D006007 1.2e-09 66.2 38 86.8
Rhsim08G0152500 Rhododendron simsii HOM05D002248 ORTHO05D006007 1.7e-08 62.4 30 96.7


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