Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC04g23830 Brassica carinata HOM05D005620 ORTHO05D002193 5.3e-41 170.6 88 100.0
BcaC08g43886 Brassica carinata HOM05D005620 ORTHO05D002193 5.8e-24 114.0 71 84.5
BolC6t36428H Brassica oleracea HOM05D005620 ORTHO05D002193 1.3e-23 112.8 67 88.1
BcaC08g46010 Brassica carinata HOM05D005620 ORTHO05D002193 3.5e-21 104.8 67 83.6
Sp4g23730 Schrenkiella parvula HOM05D005620 ORTHO05D002193 3.4e-16 88.2 71 69.0
BcaC01g05336 Brassica carinata HOM05D005620 ORTHO05D002193 5.9e-16 87.4 71 70.4
BolC3t15148H Brassica oleracea HOM05D005620 ORTHO05D002193 1.3e-15 86.3 67 73.1
CARHR136580 Cardamine hirsuta HOM05D005620 ORTHO05D002193 1.3e-15 86.3 67 65.7
BcaB01g03467 Brassica carinata HOM05D005620 ORTHO05D002193 2.2e-15 85.5 71 67.6
Thhalv10016487m.g Eutrema salsugineum HOM05D005620 ORTHO05D002193 2.9e-15 85.1 59 71.2
AL4G39540 Arabidopsis lyrata HOM05D005620 ORTHO05D002193 1.4e-14 82.8 66 65.2
C03p27780 Brassica napus HOM05D005620 ORTHO05D002193 1.4e-14 82.8 71 67.6
A04p31630 Brassica napus HOM05D005620 ORTHO05D002193 1.6e-13 79.3 70 65.7
A03p23280 Brassica napus HOM05D005620 ORTHO05D002193 4.6e-13 77.8 72 61.1
AT2G41460 Arabidopsis thaliana HOM05D005620 ORTHO05D002193 3.0e-12 75.1 66 59.1
Carub.0004s2376 Capsella rubella HOM05D005620 ORTHO05D002193 3.0e-12 75.1 67 65.7
BraA03t11547Z Brassica rapa HOM05D005620 ORTHO05D002193 3.9e-12 74.7 67 62.7
BraA04t18621Z Brassica rapa HOM05D005620 ORTHO05D002193 4.8e-10 67.8 63 63.5
BolC4t28403H Brassica oleracea HOM05D005620 ORTHO05D002193 6.3e-10 67.4 67 59.7
C04p69060 Brassica napus HOM05D005620 ORTHO05D002193 6.9e-09 63.9 67 56.7
Aa31LG1G23480 Aethionema arabicum HOM05D005620 ORTHO05D002193 3.8e-07 58.2 41 78.0


User provided reference genes

Program Settings