Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g18331 Brassica carinata HOM05D002888 ORTHO05D013752 5.1e-165 584.3 295 100.0
C02p64060 Brassica napus HOM05D002888 ORTHO05D013752 3.6e-158 561.6 286 99.0
A02p43910 Brassica napus HOM05D002888 ORTHO05D013752 1.3e-147 526.6 295 90.8
BraA02t09314Z Brassica rapa HOM05D002888 ORTHO05D013752 1.3e-147 526.6 295 90.8
Sp2g28450 Schrenkiella parvula HOM05D002888 ORTHO05D013752 2.7e-121 439.1 297 76.8
Thhalv10005617m.g Eutrema salsugineum HOM05D002888 ORTHO05D013752 1.9e-119 433.0 295 76.3
AL8G42940 Arabidopsis lyrata HOM05D002888 ORTHO05D013752 6.1e-118 427.9 293 73.4
Carub.0002s0123 Capsella rubella HOM05D002888 ORTHO05D013752 1.2e-116 423.7 296 74.0
AT5G65370 Arabidopsis thaliana HOM05D002888 ORTHO05D013752 2.9e-112 409.1 293 70.6
BcaB03g12525 Brassica carinata HOM05D002888 ORTHO05D013752 3.3e-103 379.0 294 67.3
A08p20560 Brassica napus HOM05D002888 ORTHO05D013752 1.7e-96 356.7 296 62.8
BcaC07g38269 Brassica carinata HOM05D002888 ORTHO05D013752 2.5e-95 352.8 293 63.8
BraA08t34012Z Brassica rapa HOM05D002888 ORTHO05D013752 6.2e-94 348.2 315 60.3
C08p10160 Brassica napus HOM05D002888 ORTHO05D013752 9.6e-71 271.2 293 53.2
BolC8t48695H Brassica oleracea HOM05D002888 ORTHO05D013752 9.6e-71 271.2 293 53.2
THA.LOC104798791 Tarenaya hassleriana HOM05D002888 ORTHO05D003321 4.8e-54 215.7 293 43.7
Carub.0006s0888 Capsella rubella HOM05D002888 ORTHO05D003321 1.4e-53 214.2 294 44.6
Aa31LG3G16770 Aethionema arabicum HOM05D002888 ORTHO05D003321 1.5e-52 210.7 295 43.1
AL6G20910 Arabidopsis lyrata HOM05D002888 ORTHO05D003321 1.5e-52 210.7 298 42.6
Sp6g33040 Schrenkiella parvula HOM05D002888 ORTHO05D003321 6.5e-51 205.3 294 42.9
Aa31LG3G16760 Aethionema arabicum HOM05D002888 ORTHO05D003321 1.9e-50 203.8 294 45.6
Thhalv10013869m.g Eutrema salsugineum HOM05D002888 ORTHO05D003321 3.2e-50 203.0 294 42.5
A10p27190 Brassica napus HOM05D002888 ORTHO05D003321 6.1e-49 198.7 292 41.4
BraA10t44769Z Brassica rapa HOM05D002888 ORTHO05D003321 6.1e-49 198.7 292 41.4
C09p67000 Brassica napus HOM05D002888 ORTHO05D003321 1.3e-48 197.6 292 40.8
BolC9t59473H Brassica oleracea HOM05D002888 ORTHO05D003321 1.3e-48 197.6 292 40.8
BcaC04g19306 Brassica carinata HOM05D002888 ORTHO05D003321 2.3e-48 196.8 292 40.4
BcaB08g37110 Brassica carinata HOM05D002888 ORTHO05D003321 1.5e-47 194.1 296 41.6
THA.LOC104801687 Tarenaya hassleriana HOM05D002888 ORTHO05D003321 1.5e-47 194.1 300 41.0
AT5G10410 Arabidopsis thaliana HOM05D002888 ORTHO05D003321 5.7e-47 192.2 301 39.5
CARHR202890 Cardamine hirsuta HOM05D002888 ORTHO05D003321 8.2e-46 188.3 294 39.8
CARHR279330 Cardamine hirsuta HOM05D002888 ORTHO05D013752 2.6e-36 156.8 114 67.5
CARHR279340 Cardamine hirsuta HOM05D002888 ORTHO05D003321 1.1e-34 151.4 111 69.4
Cpa.g.sc55.58 Carica papaya HOM05D002888 ORTHO05D003321 8.8e-32 141.7 303 32.0
Haze_15043 Corylus avellana HOM05D002888 ORTHO05D003321 1.1e-31 141.4 301 33.2
Manes.12G129001 Manihot esculenta HOM05D002888 ORTHO05D003321 1.1e-31 141.4 303 34.0
TWI53G0860 Tripterygium wilfordii HOM05D002888 ORTHO05D003321 3.3e-31 139.8 310 33.5
CiPaw.02G022400 Carya illinoinensis HOM05D002888 ORTHO05D003321 4.4e-31 139.4 301 29.6
Gohir.A10G087400 Gossypium hirsutum HOM05D002888 ORTHO05D003321 7.4e-31 138.7 297 33.7
Gohir.D10G100800 Gossypium hirsutum HOM05D002888 ORTHO05D003321 9.7e-31 138.3 297 33.0
Duzib264G0538 Durio zibethinus HOM05D002888 ORTHO05D003321 2.2e-30 137.1 304 34.2
Gorai.011G110500 Gossypium raimondii HOM05D002888 ORTHO05D003321 2.8e-30 136.7 297 33.0
Cfa004368 Carpinus fangiana HOM05D002888 ORTHO05D003321 3.7e-30 136.3 300 33.0
CiPaw.01G048400 Carya illinoinensis HOM05D002888 ORTHO05D003321 3.7e-30 136.3 294 31.6
Duzib187G0880 Durio zibethinus HOM05D002888 ORTHO05D003321 4.8e-30 136.0 303 35.0
ClCG10G008340 Citrullus lanatus HOM05D002888 ORTHO05D003321 1.8e-29 134.0 299 31.8
QL06p047786 Quercus lobata HOM05D002888 ORTHO05D003321 3.1e-29 133.3 299 32.1
CsaV3_4G009090 Cucumis sativus L. HOM05D002888 ORTHO05D003321 7.0e-29 132.1 300 31.7
Ciclev10025941m.g Citrus clementina HOM05D002888 ORTHO05D003321 4.5e-28 129.4 300 32.0
Sp7g35770 Schrenkiella parvula HOM05D002888 ORTHO05D003321 5.9e-28 129.0 306 31.4
Cc07_g14430 Coffea canephora HOM05D002888 ORTHO05D003321 1.0e-27 128.3 304 30.9
Thhalv10025543m.g Eutrema salsugineum HOM05D002888 ORTHO05D003321 2.9e-27 126.7 299 31.4
Duzib147G0504 Durio zibethinus HOM05D002888 ORTHO05D003321 6.5e-27 125.6 303 32.7
Gohir.A11G051000 Gossypium hirsutum HOM05D002888 ORTHO05D003321 6.5e-27 125.6 304 33.9
Atru.chr3.1322 Acer truncatum HOM05D002888 ORTHO05D003321 1.1e-26 124.8 277 31.8
C01p01130 Brassica napus HOM05D002888 ORTHO05D003321 1.9e-26 124.0 303 30.7
BolC1t00111H Brassica oleracea HOM05D002888 ORTHO05D003321 1.9e-26 124.0 303 30.7
MELO3C019004.2 Cucumis melo HOM05D002888 ORTHO05D003321 1.9e-26 124.0 301 32.6
Thecc.01G093800 Theobroma cacao HOM05D002888 ORTHO05D003321 3.2e-26 123.2 303 32.3
AT4G40080 Arabidopsis thaliana HOM05D002888 ORTHO05D003321 4.2e-26 122.9 300 30.3
A01p01010 Brassica napus HOM05D002888 ORTHO05D003321 5.5e-26 122.5 303 30.4
BraA01t00099Z Brassica rapa HOM05D002888 ORTHO05D003321 5.5e-26 122.5 303 30.4
AL7G12440 Arabidopsis lyrata HOM05D002888 ORTHO05D003321 7.2e-26 122.1 300 30.7
GSVIVG01007072001 Vitis vinifera HOM05D002888 ORTHO05D003321 4.7e-25 119.4 298 31.2
BcaNung00942 Brassica carinata HOM05D002888 ORTHO05D003321 6.1e-25 119.0 309 30.4
Carub.0007s0207 Capsella rubella HOM05D002888 ORTHO05D003321 6.1e-25 119.0 300 30.3
Gohir.D11G054400 Gossypium hirsutum HOM05D002888 ORTHO05D003321 6.1e-25 119.0 293 33.4
Aa31LG6G15130 Aethionema arabicum HOM05D002888 ORTHO05D003321 1.8e-24 117.5 302 29.8
RcHm_v2.0_Chr2g0112101 Rosa chinensis HOM05D002888 ORTHO05D003321 2.3e-24 117.1 298 30.2
A08p23140 Brassica napus HOM05D002888 ORTHO05D003321 3.0e-24 116.7 300 30.7
C03p78700 Brassica napus HOM05D002888 ORTHO05D003321 3.0e-24 116.7 301 31.2
BcaNung00940 Brassica carinata HOM05D002888 ORTHO05D003321 3.9e-24 116.3 303 29.4
Sed0008018 Sechium edule HOM05D002888 ORTHO05D003321 3.9e-24 116.3 294 31.6
TWI74G0173 Tripterygium wilfordii HOM05D002888 ORTHO05D003321 3.9e-24 116.3 292 31.2
BcaC01g00342 Brassica carinata HOM05D002888 ORTHO05D003321 5.2e-24 115.9 301 31.2
BraA08t34272Z Brassica rapa HOM05D002888 ORTHO05D003321 2.0e-23 114.0 300 30.7
AUR62027189 Chenopodium quinoa HOM05D002888 ORTHO05D003321 2.6e-23 113.6 304 30.3
Medtr3g086670 Medicago truncatula HOM05D002888 ORTHO05D003321 2.6e-23 113.6 303 30.4
BolC3t20115H Brassica oleracea HOM05D002888 ORTHO05D003321 4.4e-23 112.8 301 31.2
TPR.G30527 Trifolium pratense HOM05D000542 ORTHO05D003321 5.7e-23 112.5 303 30.0
EL10Ac6g14804 Beta vulgaris HOM05D002888 ORTHO05D003321 7.4e-23 112.1 304 29.6
Sopen11g005150 Solanum pennellii HOM05D002888 ORTHO05D003321 7.4e-23 112.1 305 29.2
Psat5g090920 Pisum sativum HOM05D002888 ORTHO05D003321 9.7e-23 111.7 304 30.3
TAR628G0527 Trochodendron aralioides HOM05D002888 ORTHO05D003321 1.3e-22 111.3 303 31.4
Lj2P538T22 Lonicera japonica HOM05D002888 ORTHO05D003321 1.7e-22 110.9 298 30.9
Dinv13633 Davidia involucrata HOM05D002888 ORTHO05D003321 2.8e-22 110.2 298 28.5
Hma1.2p1_0045F.1_g026590 Hydrangea macrophylla HOM05D002888 ORTHO05D003321 8.2e-22 108.6 306 29.4
CSS0026892 Camellia sinensis var. sinensis HOM05D002888 ORTHO05D003321 1.1e-21 108.2 299 28.8
Solyc11g010370.1 Solanum lycopersicum HOM05D002888 ORTHO05D003321 1.1e-21 108.2 305 28.9
Aqoxy6G00686 Aquilegia oxysepala HOM05D002888 ORTHO05D003321 5.3e-21 105.9 309 30.7
Ca_25141_v3 Cicer arietinum L. HOM05D002888 ORTHO05D003321 7.0e-21 105.5 307 29.6
Ca_30634_v3 Cicer arietinum L. HOM05D002888 ORTHO05D003321 7.0e-21 105.5 307 29.6
Rhsim10G0169700 Rhododendron simsii HOM05D002888 ORTHO05D003321 1.2e-20 104.8 303 29.4
THA.LOC104824904 Tarenaya hassleriana HOM05D002888 ORTHO05D003321 1.2e-20 104.8 306 29.4
Actinidia06530 Actinidia chinensis HOM05D002888 ORTHO05D003321 1.6e-20 104.4 300 28.7
MD15G1316600 Malus domestica HOM05D002888 ORTHO05D003321 2.6e-20 103.6 300 28.3
Ah.02g125790 Amaranthus hybridus HOM05D002888 ORTHO05D003321 4.5e-20 102.8 301 28.2
Dinv20800 Davidia involucrata HOM05D002888 ORTHO05D003321 4.5e-20 102.8 305 28.9
MSTRG.2589 Avicennia marina HOM05D002888 ORTHO05D003321 5.9e-20 102.4 298 29.9
Oeu031107.1 Olea europaea HOM05D002888 ORTHO05D003321 7.7e-20 102.1 303 27.1
Glyma.05G175100 Glycine max HOM05D002888 ORTHO05D003321 1.3e-19 101.3 300 29.3
Lalb_Chr07g0185361 Lupinus albus HOM05D002888 ORTHO05D003321 1.3e-19 101.3 303 29.4
COL.COLO4_27312 Corchorus olitorius HOM05D002888 ORTHO05D003321 2.2e-19 100.5 303 30.0
MBI06_g18771_MAGBIO Magnolia biondii HOM05D002888 ORTHO05D003321 2.2e-19 100.5 286 31.8
PGR102G0243 Punica granatum HOM05D002888 ORTHO05D003321 2.2e-19 100.5 297 28.6
Nn5g29964 Nelumbo nucifera HOM05D002888 ORTHO05D003321 2.9e-19 100.1 304 28.3
Cfa017907 Carpinus fangiana HOM05D002888 ORTHO05D003321 6.5e-19 99.0 298 29.5
Oeu000873.1 Olea europaea HOM05D002888 ORTHO05D003321 6.5e-19 99.0 302 27.8
Peaxi162Scf00237g00041 Petunia axillaris HOM05D002888 ORTHO05D003321 6.5e-19 99.0 294 26.5
Lj4g0004924 Lotus japonicus HOM05D002888 ORTHO05D003321 8.5e-19 98.6 300 27.0
Lsat_1_v5_gn_2_65861 Lactuca sativa HOM05D002888 ORTHO05D003321 1.1e-18 98.2 294 28.2
Glyma.18G014200 Glycine max HOM05D002888 ORTHO05D003321 1.5e-18 97.8 302 28.1
Phvul.002G260200 Phaseolus vulgaris HOM05D002888 ORTHO05D003321 1.9e-18 97.4 303 28.7
PGSC0003DMG400016215 Solanum tuberosum HOM05D002888 ORTHO05D003321 2.5e-18 97.1 305 28.5
Ciclev10001701m.g Citrus clementina HOM05D002888 ORTHO05D003321 5.5e-18 95.9 306 27.5
vmacro22669 Vaccinium macrocarpon HOM05D002888 ORTHO05D003321 7.2e-18 95.5 255 29.0
Rhsim07G0206000 Rhododendron simsii HOM05D002888 ORTHO05D003321 9.4e-18 95.1 295 30.5
Atru.chr13.1094 Acer truncatum HOM05D002888 ORTHO05D003321 1.2e-17 94.7 305 29.5
Rhsim07G0207000 Rhododendron simsii HOM05D002888 ORTHO05D003321 2.1e-17 94.0 295 30.5
Oeu002153.1 Olea europaea HOM05D002888 ORTHO05D003321 2.7e-17 93.6 305 26.2
Atru.chr13.1103 Acer truncatum HOM05D002888 ORTHO05D003321 4.7e-17 92.8 305 29.2
Dinv42661 Davidia involucrata HOM05D002888 ORTHO05D003321 4.7e-17 92.8 301 28.9
Nitab4.5_0001078g0140 Nicotiana tabacum HOM05D002888 ORTHO05D003321 8.0e-17 92.0 296 29.1
MSTRG.23365 Avicennia marina HOM05D002888 ORTHO05D003321 1.4e-16 91.3 298 27.5
Ca_16030_v3 Cicer arietinum L. HOM05D002888 ORTHO05D003321 1.4e-16 91.3 299 28.4
Dinv44817 Davidia involucrata HOM05D002888 ORTHO05D003321 1.4e-16 91.3 299 28.4
Lsat_1_v5_gn_6_105921 Lactuca sativa HOM05D002888 ORTHO05D003321 1.4e-16 91.3 298 27.5
Medtr3g099670 Medicago truncatula HOM05D002888 ORTHO05D003321 1.4e-16 91.3 298 27.2
TPR.G6366 Trifolium pratense HOM05D002888 ORTHO05D003321 1.8e-16 90.9 303 27.7
CAN.G1173.10 Capsicum annuum HOM05D002888 ORTHO05D003321 2.3e-16 90.5 300 27.3
CDE03G0472 Ceratophyllum demersum HOM05D002888 ORTHO05D003321 2.3e-16 90.5 298 27.9
Migut.H02319 Erythranthe guttata HOM05D002888 ORTHO05D003321 2.3e-16 90.5 292 30.1
Glyma.08G132400 Glycine max HOM05D002888 ORTHO05D003321 2.3e-16 90.5 279 29.0
Medtr8g089850 Medicago truncatula HOM05D002888 ORTHO05D003321 5.2e-16 89.4 272 27.9
Nitab4.5_0007011g0010 Nicotiana tabacum HOM05D002888 ORTHO05D003321 6.8e-16 89.0 297 29.0
Cc10_g06560 Coffea canephora HOM05D002888 ORTHO05D003321 2.6e-15 87.0 303 28.4
PGSC0003DMG400002134 Solanum tuberosum HOM05D002888 ORTHO05D003321 2.6e-15 87.0 294 27.2
Sopen00g013050 Solanum pennellii HOM05D002888 ORTHO05D003321 3.4e-15 86.7 294 27.6
Haze_18244 Corylus avellana HOM05D002888 ORTHO05D003321 5.7e-15 85.9 298 26.8
Gorai.007G059500 Gossypium raimondii HOM05D002888 ORTHO05D003321 5.7e-15 85.9 290 27.9
Nitab4.5_0004715g0010 Nicotiana tabacum HOM05D002888 ORTHO05D003321 5.7e-15 85.9 219 27.9
Solyc04g074830.1 Solanum lycopersicum HOM05D002888 ORTHO05D003321 9.7e-15 85.1 294 27.2
Oeu011241.1 Olea europaea HOM05D002888 ORTHO05D003321 1.7e-14 84.3 302 26.5
vmacro04702 Vaccinium macrocarpon HOM05D002888 ORTHO05D003321 1.7e-14 84.3 328 27.1
HanXRQChr14g0445001 Helianthus annuus HOM05D002888 ORTHO05D003321 2.8e-14 83.6 293 26.3
Oeu031415.1 Olea europaea HOM05D002888 ORTHO05D003321 6.3e-14 82.4 302 26.2
COL.COLO4_11980 Corchorus olitorius HOM05D002888 ORTHO05D003321 8.3e-14 82.0 271 27.7
Gohir.A05G222700 Gossypium hirsutum HOM05D002888 ORTHO05D003321 9.1e-13 78.6 292 26.7
PSO675G6142 Papaver somniferum HOM05D002888 ORTHO05D003321 1.2e-12 78.2 319 25.4
CAN.G905.1 Capsicum annuum HOM05D002888 ORTHO05D003321 4.5e-12 76.3 162 33.3
Manes.18G062900 Manihot esculenta HOM05D002888 ORTHO05D003321 4.5e-12 76.3 279 26.5
Gorai.009G232900 Gossypium raimondii HOM05D002888 ORTHO05D003321 5.9e-12 75.9 292 26.4
Gohir.A06G032800 Gossypium hirsutum HOM05D002888 ORTHO05D003321 1.3e-11 74.7 298 25.2
Gohir.D05G225400 Gossypium hirsutum HOM05D002888 ORTHO05D003321 1.3e-11 74.7 292 26.4
Gohir.D06G033700 Gossypium hirsutum HOM05D002888 ORTHO05D003321 2.2e-11 73.9 298 25.5
Gorai.010G037200 Gossypium raimondii HOM05D002888 ORTHO05D003321 2.9e-11 73.6 298 25.5
CARHR246530 Cardamine hirsuta HOM05D002888 ORTHO05D003321 3.8e-11 73.2 149 32.2
Duzib116G0178 Durio zibethinus HOM05D002888 ORTHO05D003321 3.8e-11 73.2 235 25.5
MD08G1190800 Malus domestica HOM05D002888 ORTHO05D003321 5.0e-11 72.8 295 26.1
MD15G1378100 Malus domestica HOM05D002888 ORTHO05D003321 8.5e-11 72.0 295 25.1
Prupe.1G524700 Prunus persica HOM05D002888 ORTHO05D003321 7.2e-10 68.9 298 27.2
Actinidia02765 Actinidia chinensis HOM05D002888 ORTHO05D003321 1.2e-09 68.2 227 29.5
Peaxi162Scf00139g00057 Petunia axillaris HOM05D002888 ORTHO05D003321 1.2e-09 68.2 303 24.8
AUR62018989 Chenopodium quinoa HOM05D002888 ORTHO05D003321 2.1e-09 67.4 304 26.3
Sed0014089 Sechium edule HOM05D002888 ORTHO05D003321 8.0e-09 65.5 300 27.0
AUR62027831 Chenopodium quinoa HOM05D002888 ORTHO05D003321 1.4e-08 64.7 304 26.0
vmacro22071 Vaccinium macrocarpon HOM05D002888 ORTHO05D003321 2.3e-08 63.9 176 26.7
CsaV3_2G029960 Cucumis sativus L. HOM05D002888 ORTHO05D003321 6.8e-08 62.4 303 25.4
MELO3C011054.2 Cucumis melo HOM05D002888 ORTHO05D003321 1.5e-07 61.2 299 24.7
Actinidia01866 Actinidia chinensis HOM05D002888 ORTHO05D003321 3.4e-07 60.1 150 32.7
EL10Ac1g01114 Beta vulgaris HOM05D002888 ORTHO05D003321 1.3e-06 58.2 293 26.3
PSO541G2212 Papaver somniferum HOM05D002888 ORTHO05D003321 1.3e-06 58.2 302 24.8
Lj9A317T76 Lonicera japonica HOM05D000291 ORTHO05D001358 1.7e-06 57.8 268 26.5
CARHR246540 Cardamine hirsuta HOM05D002888 ORTHO05D003321 2.8e-06 57.0 151 28.5
FAN04G1940 Fragaria x ananassa HOM05D000291 ORTHO05D001358 6.3e-06 55.8 298 25.2


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