Gene: AT4G40080
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G40080
- Transcript Identifier AT4G40080.1
- Gene Type Coding gene
- Location Chr4 : 18579371-18580542 : positive
Gene Family Information
- ID HOM05D002888
- #Genes/#Species 240/85
- Phylogenetic origin
- ID ORTHO05D003321
- #Genes/#Species 231/86
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT4G40080.1
- uniprot Q8L936
Descriptions
- Description ENTH/ANTH/VHS superfamily protein
- Computational description ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT5G10410.1); Has 479 Blast hits to 479 proteins in 43 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 0; Plants - 318; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006897 | IEA | GOA Database | endocytosis | |
GO:0006900 | IBA | Gene Ontology | vesicle budding from membrane | 1 |
GO:0072583 | IBA | Gene Ontology | clathrin-dependent endocytosis | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005543 | IEA | GOA Database | phospholipid binding | |
GO:0005543 | IEA | InterPro | phospholipid binding | |
GO:0005545 | IBA | Gene Ontology | 1-phosphatidylinositol binding | 1 |
GO:0005546 | IBA | Gene Ontology | phosphatidylinositol-4,5-bisphosphate binding | 1 |
GO:0032050 | IBA | Gene Ontology | clathrin heavy chain binding | 1 |
GO:0000149 | IBA | Gene Ontology | SNARE binding | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005905 | IEA | GOA Database | clathrin-coated pit | |
GO:0005905 | IBA | Gene Ontology | clathrin-coated pit | 1 |
GO:0016020 | IEA | GOA Database | membrane | |
GO:0031410 | IEA | GOA Database | cytoplasmic vesicle | |
GO:0005794 | IEA | GOA Database | Golgi apparatus | |
GO:0030136 | IEA | GOA Database | clathrin-coated vesicle | |
GO:0030136 | IBA | Gene Ontology | clathrin-coated vesicle | 1 |
GO:0005739 | ISM | Gene Ontology | mitochondrion |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |