Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g16652 Brassica carinata HOM05D003480 ORTHO05D004425 2.9e-45 184.9 96 100.0
Sp2g09160 Schrenkiella parvula HOM05D003480 ORTHO05D004425 7.3e-28 127.1 129 60.5
BcaC06g31627 Brassica carinata HOM05D003480 ORTHO05D004425 6.2e-27 124.0 129 58.9
Thhalv10003390m.g Eutrema salsugineum HOM05D003480 ORTHO05D004425 6.2e-27 124.0 129 58.9
A02p28360 Brassica napus HOM05D003480 ORTHO05D004425 6.8e-26 120.6 103 68.0
BraA02t07873Z Brassica rapa HOM05D003480 ORTHO05D004425 6.8e-26 120.6 103 68.0
AL8G15580 Arabidopsis lyrata HOM05D003480 ORTHO05D004425 1.2e-25 119.8 130 57.7
AT5G44320 Arabidopsis thaliana HOM05D003480 ORTHO05D004425 1.2e-25 119.8 130 56.9
BraA06t27601Z Brassica rapa HOM05D003480 ORTHO05D004425 2.2e-24 115.5 129 55.0
C02p44940 Brassica napus HOM05D003480 ORTHO05D004425 7.1e-23 110.5 70 84.3
BcaB07g30952 Brassica carinata HOM05D003480 ORTHO05D004425 1.2e-22 109.8 130 54.6
CARHR178810 Cardamine hirsuta HOM05D003480 ORTHO05D004425 1.2e-22 109.8 129 54.3
BcaC06g31628 Brassica carinata HOM05D003480 ORTHO05D004425 2.7e-22 108.6 129 54.3
BcaC06g34569 Brassica carinata HOM05D003480 ORTHO05D004425 2.7e-22 108.6 129 54.3
C07p27040 Brassica napus HOM05D003480 ORTHO05D004425 2.7e-22 108.6 129 54.3
BolC7t43234H Brassica oleracea HOM05D003480 ORTHO05D004425 2.7e-22 108.6 129 54.3
Aa31LG6G3040 Aethionema arabicum HOM05D003480 ORTHO05D004425 6.0e-22 107.5 129 54.3
A09p21050 Brassica napus HOM05D003480 ORTHO05D004425 1.3e-21 106.3 129 52.7
C09p26790 Brassica napus HOM05D003480 ORTHO05D004425 1.3e-21 106.3 129 52.7
BolC9t55567H Brassica oleracea HOM05D003480 ORTHO05D004425 1.3e-21 106.3 129 52.7
BraA09t37704Z Brassica rapa HOM05D003480 ORTHO05D004425 1.3e-21 106.3 129 52.7
THA.LOC104812939 Tarenaya hassleriana HOM05D003480 ORTHO05D004425 2.3e-21 105.5 130 52.3
BcaB07g30957 Brassica carinata HOM05D003480 ORTHO05D004425 3.9e-21 104.8 123 52.8
BcaC04g21840 Brassica carinata HOM05D003480 ORTHO05D004425 3.9e-21 104.8 123 52.8
CARHR227530 Cardamine hirsuta HOM05D003480 ORTHO05D004425 5.1e-21 104.4 130 52.3
Sp7g19050 Schrenkiella parvula HOM05D003480 ORTHO05D004425 8.6e-21 103.6 128 50.8
Carub.0007s2046 Capsella rubella HOM05D003480 ORTHO05D004425 1.1e-20 103.2 131 52.7
PSO541G6261 Papaver somniferum HOM05D003480 ORTHO05D004425 1.9e-20 102.4 117 53.8
PSO675G1395 Papaver somniferum HOM05D003480 ORTHO05D004425 1.9e-20 102.4 117 53.8
AT4G20980 Arabidopsis thaliana HOM05D003480 ORTHO05D004425 4.3e-20 101.3 112 56.2
Carub.0008s0415 Capsella rubella HOM05D003480 ORTHO05D004425 4.3e-20 101.3 104 59.6
Sabra11G0037300 Salix brachista HOM05D003480 ORTHO05D004425 5.6e-20 100.9 117 52.1
THA.LOC104812284 Tarenaya hassleriana HOM05D003480 ORTHO05D004425 5.6e-20 100.9 130 50.0
Potri.004G044500 Populus trichocarpa HOM05D003480 ORTHO05D004425 7.3e-20 100.5 108 54.6
Aqoxy4G02656 Aquilegia oxysepala HOM05D003480 ORTHO05D004425 9.5e-20 100.1 113 54.0
Dinv40570 Davidia involucrata HOM05D003480 ORTHO05D004425 1.6e-19 99.4 130 49.2
Nn1g06510 Nelumbo nucifera HOM05D003480 ORTHO05D004425 1.6e-19 99.4 116 52.6
AL7G33170 Arabidopsis lyrata HOM05D003480 ORTHO05D004425 2.1e-19 99.0 130 53.8
Potri.011G053500 Populus trichocarpa HOM05D003480 ORTHO05D004425 2.1e-19 99.0 108 53.7
Sabra04G0027700 Salix brachista HOM05D003480 ORTHO05D004425 2.1e-19 99.0 108 53.7
PGSC0003DMG400029694 Solanum tuberosum HOM05D003480 ORTHO05D004425 2.1e-19 99.0 125 49.6
Psat3g013320 Pisum sativum HOM05D003480 ORTHO05D004425 2.8e-19 98.6 129 48.1
GSVIVG01002790001 Vitis vinifera HOM05D003480 ORTHO05D004425 2.8e-19 98.6 109 54.1
Atru.chr10.1865 Acer truncatum HOM05D003480 ORTHO05D004425 3.6e-19 98.2 102 54.9
ECA248G3601 Erigeron canadensis HOM05D003480 ORTHO05D004425 3.6e-19 98.2 105 52.4
Phvul.006G184500 Phaseolus vulgaris HOM05D003480 ORTHO05D004425 4.7e-19 97.8 101 53.5
Glyma.13G238200 Glycine max HOM05D003480 ORTHO05D004425 6.2e-19 97.4 129 47.3
CiPaw.10G049800 Carya illinoinensis HOM05D003480 ORTHO05D004425 8.1e-19 97.1 112 50.9
Glyma.15G075100 Glycine max HOM05D003480 ORTHO05D004425 8.1e-19 97.1 129 47.3
MBI10_g03527_MAGBIO Magnolia biondii HOM05D003480 ORTHO05D004425 8.1e-19 97.1 126 48.4
QL06p053406 Quercus lobata HOM05D003480 ORTHO05D004425 8.1e-19 97.1 102 52.9
ATR0665G336 Amborella trichopoda HOM05D003480 ORTHO05D004425 1.1e-18 96.7 115 48.7
CSS0021711 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D004425 1.1e-18 96.7 129 47.3
Haze_06432 Corylus avellana HOM05D003480 ORTHO05D004425 1.1e-18 96.7 110 52.7
Lsat_1_v5_gn_1_126340 Lactuca sativa HOM05D003480 ORTHO05D004425 1.1e-18 96.7 113 49.6
Manes.11G028400 Manihot esculenta HOM05D003480 ORTHO05D004425 1.1e-18 96.7 117 49.6
Nitab4.5_0009438g0010 Nicotiana tabacum HOM05D003480 ORTHO05D004425 1.1e-18 96.7 125 48.8
A06p47300 Brassica napus HOM05D003480 ORTHO05D004425 1.4e-18 96.3 129 49.6
DCAR_024898 Daucus carota HOM05D003480 ORTHO05D004425 1.4e-18 96.3 127 48.0
Gohir.D10G027200 Gossypium hirsutum HOM05D003480 ORTHO05D004425 1.4e-18 96.3 102 52.9
Gorai.011G028500 Gossypium raimondii HOM05D003480 ORTHO05D004425 1.4e-18 96.3 102 52.9
Nn1g04114 Nelumbo nucifera HOM05D003480 ORTHO05D004425 1.4e-18 96.3 116 50.9
Sc17g0006150 Simmondsia chinensis HOM05D003480 ORTHO05D004425 1.4e-18 96.3 101 53.5
Solyc02g078120.2 Solanum lycopersicum HOM05D003480 ORTHO05D004425 1.4e-18 96.3 126 48.4
Thecc.06G186000 Theobroma cacao HOM05D003480 ORTHO05D004425 1.4e-18 96.3 128 49.2
vmacro03877 Vaccinium macrocarpon HOM05D003480 ORTHO05D004425 1.4e-18 96.3 104 51.9
Ciclev10017475m.g Citrus clementina HOM05D003480 ORTHO05D004425 1.8e-18 95.9 120 48.3
Duzib235G0380 Durio zibethinus HOM05D003480 ORTHO05D004425 1.8e-18 95.9 129 48.8
Lj1A1204T32 Lonicera japonica HOM05D003480 ORTHO05D004425 1.8e-18 95.9 108 52.8
QL06p052924 Quercus lobata HOM05D003480 ORTHO05D004425 1.8e-18 95.9 115 50.4
Actinidia05643 Actinidia chinensis HOM05D003480 ORTHO05D004425 2.3e-18 95.5 102 52.0
CAN.G529.1 Capsicum annuum HOM05D003480 ORTHO05D004425 2.3e-18 95.5 125 48.8
AUR62015260 Chenopodium quinoa HOM05D003480 ORTHO05D004425 2.3e-18 95.5 120 49.2
Gorai.009G169000 Gossypium raimondii HOM05D003480 ORTHO05D004425 2.3e-18 95.5 102 52.0
HanXRQChr01g0003861 Helianthus annuus HOM05D003480 ORTHO05D004425 2.3e-18 95.5 126 48.4
HanXRQChr16g0516221 Helianthus annuus HOM05D003480 ORTHO05D004425 2.3e-18 95.5 116 48.3
MD05G1338100 Malus domestica HOM05D003480 ORTHO05D004425 2.3e-18 95.5 125 48.8
Prupe.4G048700 Prunus persica HOM05D003480 ORTHO05D004425 2.3e-18 95.5 125 48.0
Rhsim13G0138500 Rhododendron simsii HOM05D003480 ORTHO05D004425 2.3e-18 95.5 102 52.0
VMungo0540G0515 Vigna mungo HOM05D003480 ORTHO05D004425 2.3e-18 95.5 110 50.9
PSO210G2017 Papaver somniferum HOM05D003480 ORTHO05D004425 3.1e-18 95.1 116 51.7
TWI38G1399 Tripterygium wilfordii HOM05D003480 ORTHO05D004425 3.1e-18 95.1 116 49.1
TAR626G0815 Trochodendron aralioides HOM05D003480 ORTHO05D004425 3.1e-18 95.1 116 50.9
AUR62018061 Chenopodium quinoa HOM05D003480 ORTHO05D004425 4.0e-18 94.7 102 52.0
AUR62019528 Chenopodium quinoa HOM05D003480 ORTHO05D004425 4.0e-18 94.7 102 52.0
Ca_00342_v3 Cicer arietinum L. HOM05D003480 ORTHO05D004425 4.0e-18 94.7 101 52.5
Dinv17321 Davidia involucrata HOM05D003480 ORTHO05D004425 4.0e-18 94.7 129 48.1
Sopen02g022950 Solanum pennellii HOM05D003480 ORTHO05D004425 4.0e-18 94.7 126 47.6
TPR.G1669 Trifolium pratense HOM05D003480 ORTHO05D004425 4.0e-18 94.7 94 58.5
arahy.Tifrunner.gnm1.ann1.FXY2MK Arachis hypogaea HOM05D003480 ORTHO05D004425 5.2e-18 94.4 101 51.5
arahy.Tifrunner.gnm1.ann1.R134T8 Arachis hypogaea HOM05D003480 ORTHO05D004425 5.2e-18 94.4 101 51.5
Gohir.A06G128300 Gossypium hirsutum HOM05D003480 ORTHO05D004425 5.2e-18 94.4 126 47.6
Gorai.010G154200 Gossypium raimondii HOM05D003480 ORTHO05D004425 5.2e-18 94.4 126 47.6
Lj6g0027126 Lotus japonicus HOM05D003480 ORTHO05D004425 5.2e-18 94.4 128 46.9
Nitab4.5_0011879g0010 Nicotiana tabacum HOM05D003480 ORTHO05D004425 5.2e-18 94.4 114 49.1
Sed0021745 Sechium edule HOM05D003480 ORTHO05D004425 5.2e-18 94.4 126 46.8
CiPaw.09G060800 Carya illinoinensis HOM05D003480 ORTHO05D004425 6.8e-18 94.0 131 46.6
COL.COLO4_31457 Corchorus olitorius HOM05D003480 ORTHO05D004425 6.8e-18 94.0 129 46.5
PSO210G2817 Papaver somniferum HOM05D003480 ORTHO05D004425 6.8e-18 94.0 116 50.9
Sed0013036 Sechium edule HOM05D003480 ORTHO05D004425 6.8e-18 94.0 113 48.7
TAR375G0365 Trochodendron aralioides HOM05D003480 ORTHO05D004425 6.8e-18 94.0 116 50.0
CANSAT35G1561 Cannabis sativa HOM05D003480 ORTHO05D004425 8.9e-18 93.6 114 50.0
Duzib192G0865 Durio zibethinus HOM05D003480 ORTHO05D004425 8.9e-18 93.6 124 47.6
Hma1.2p1_0673F.1_g201280 Hydrangea macrophylla HOM05D003480 ORTHO05D004425 8.9e-18 93.6 110 50.9
Hma1.2p1_1222F.1_g268180 Hydrangea macrophylla HOM05D003480 ORTHO05D004425 8.9e-18 93.6 110 50.9
Peaxi162Scf00048g00153 Petunia axillaris HOM05D003480 ORTHO05D004425 8.9e-18 93.6 125 47.2
Psat1g204440 Pisum sativum HOM05D003480 ORTHO05D004425 8.9e-18 93.6 128 46.1
PGR042G2561 Punica granatum HOM05D003480 ORTHO05D004425 8.9e-18 93.6 102 52.9
Hund23769 Selenicereus undatus HOM05D003480 ORTHO05D004425 8.9e-18 93.6 104 51.0
CSS0026003 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D004425 1.2e-17 93.2 129 47.3
CAN.G413.27 Capsicum annuum HOM05D003480 ORTHO05D004425 1.2e-17 93.2 125 47.2
AUR62036107 Chenopodium quinoa HOM05D003480 ORTHO05D004425 1.2e-17 93.2 115 48.7
Gohir.A10G026600 Gossypium hirsutum HOM05D003480 ORTHO05D004425 1.2e-17 93.2 129 46.5
FAN04G1437 Fragaria x ananassa HOM05D003480 ORTHO05D004425 1.5e-17 92.8 126 47.6
Gohir.A05G161200 Gossypium hirsutum HOM05D003480 ORTHO05D004425 1.5e-17 92.8 123 45.5
Gohir.D05G163900 Gossypium hirsutum HOM05D003480 ORTHO05D004425 1.5e-17 92.8 123 45.5
Ah.12g058540 Amaranthus hybridus HOM05D003480 ORTHO05D004425 2.0e-17 92.4 129 46.5
Cpa.g.sc27.36 Carica papaya HOM05D003480 ORTHO05D004425 2.0e-17 92.4 121 47.1
FAN08G1211 Fragaria x ananassa HOM05D003480 ORTHO05D004425 2.0e-17 92.4 126 47.6
RcHm_v2.0_Chr5g0048541 Rosa chinensis HOM05D003480 ORTHO05D004425 2.0e-17 92.4 126 48.4
TWI38G1181 Tripterygium wilfordii HOM05D003480 ORTHO05D004425 2.0e-17 92.4 110 48.2
Lalb_Chr20g0121821 Lupinus albus HOM05D003480 ORTHO05D004425 2.6e-17 92.0 106 48.1
MSTRG.15878 Avicennia marina HOM05D003480 ORTHO05D004425 3.4e-17 91.7 122 46.7
EL10Ac8g19153 Beta vulgaris HOM05D003480 ORTHO05D004425 3.4e-17 91.7 129 45.7
CDE07G0331 Ceratophyllum demersum HOM05D003480 ORTHO05D004425 3.4e-17 91.7 107 51.4
Migut.H01483 Erythranthe guttata HOM05D003480 ORTHO05D004425 3.4e-17 91.7 125 48.0
FvH4_5g27490 Fragaria vesca HOM05D003480 ORTHO05D004425 3.4e-17 91.7 123 48.0
FAN13G0993 Fragaria x ananassa HOM05D003480 ORTHO05D004425 3.4e-17 91.7 123 48.0
FAN18G0389 Fragaria x ananassa HOM05D003480 ORTHO05D004425 3.4e-17 91.7 123 48.0
Medtr7g111950 Medicago truncatula HOM05D003480 ORTHO05D004425 3.4e-17 91.7 128 46.9
TPR.G16497 Trifolium pratense HOM05D003480 ORTHO05D004425 3.4e-17 91.7 116 44.8
Actinidia16555 Actinidia chinensis HOM05D003480 ORTHO05D004425 4.4e-17 91.3 125 48.0
Migut.M01135 Erythranthe guttata HOM05D003480 ORTHO05D004425 4.4e-17 91.3 116 46.6
Eucgr.D00614 Eucalyptus grandis HOM05D003480 ORTHO05D004425 4.4e-17 91.3 105 51.4
Os05g0566500 Oryza sativa ssp. japonica HOM05D003480 ORTHO05D004425 5.8e-17 90.9 130 43.8
unitig_22.g5701 Utricularia gibba HOM05D003480 ORTHO05D004425 5.8e-17 90.9 131 45.8
unitig_8.g3643 Utricularia gibba HOM05D003480 ORTHO05D004425 5.8e-17 90.9 123 45.5
FAN16G2584 Fragaria x ananassa HOM05D003480 ORTHO05D004425 9.9e-17 90.1 117 48.7
FAN21G3883 Fragaria x ananassa HOM05D003480 ORTHO05D004425 9.9e-17 90.1 117 48.7
CDE06G2702 Ceratophyllum demersum HOM05D003480 ORTHO05D004425 1.3e-16 89.7 103 49.5
Lalb_Chr15g0089781 Lupinus albus HOM05D003480 ORTHO05D004425 2.2e-16 89.0 124 43.5
SGA_v2.0_scaffold49G18296 Striga asiatica HOM05D003480 ORTHO05D004425 2.2e-16 89.0 129 43.4
TAR627G1095 Trochodendron aralioides HOM05D003480 ORTHO05D004425 2.2e-16 89.0 113 49.6
FvH4_3g37950 Fragaria vesca HOM05D003480 ORTHO05D004425 6.4e-16 87.4 126 46.8
FAN11G2816 Fragaria x ananassa HOM05D003480 ORTHO05D004425 6.4e-16 87.4 126 46.8
ATR0665G315 Amborella trichopoda HOM05D003480 ORTHO05D004425 1.4e-15 86.3 98 50.0
Manes.04G137900 Manihot esculenta HOM05D003480 ORTHO05D004425 5.4e-15 84.3 117 45.3
SHI13762 Sapria himalayana HOM05D003480 ORTHO05D004425 3.5e-14 81.6 124 44.4
SEGI_12249 Sequoiadendron giganteum HOM05D003480 ORTHO05D004425 3.5e-14 81.6 95 48.4
Zm00001eb157540 Zea mays HOM05D003480 ORTHO05D004425 4.6e-14 81.3 126 42.1
ClCG01G025340 Citrullus lanatus HOM05D003480 ORTHO05D004425 6.0e-14 80.9 93 49.5
CsaV3_6G052600 Cucumis sativus L. HOM05D003480 ORTHO05D004425 6.0e-14 80.9 93 49.5
SGA_v2.0_scaffold159G37637 Striga asiatica HOM05D003480 ORTHO05D004425 6.0e-14 80.9 102 45.1
Pp3c13_8400 Physcomitrium patens HOM05D003480 ORTHO05D004425 1.3e-13 79.7 98 45.9
Pp3c3_3440 Physcomitrium patens HOM05D003480 ORTHO05D004425 1.3e-13 79.7 98 45.9
SMO169G0124 Selaginella moellendorffii HOM05D003480 ORTHO05D004425 5.1e-13 77.8 95 45.3
SMO298G0032 Selaginella moellendorffii HOM05D003480 ORTHO05D004425 5.1e-13 77.8 95 45.3
Zm00001eb296070 Zea mays HOM05D003480 ORTHO05D004425 1.1e-12 76.6 134 41.0
Mapoly0112s0008 Marchantia polymorpha HOM05D003480 ORTHO05D004425 1.9e-12 75.9 98 43.9
AagrBONN_evm.TU.Sc2ySwM_117.1925 Anthoceros agrestis HOM05D003480 ORTHO05D004425 7.3e-12 73.9 109 40.4
Pp3c12_8550 Physcomitrium patens HOM05D003480 ORTHO05D004425 2.1e-11 72.4 95 43.2
CBR_g20021 Chara braunii HOM05D003480 ORTHO05D004425 8.1e-11 70.5 103 40.8
CBR_g8049 Chara braunii HOM05D003480 ORTHO05D004425 3.1e-10 68.6 106 41.5
Oeu029359.1 Olea europaea HOM05D001843 ORTHO05D008358 9.3e-07 57.0 81 43.2


User provided reference genes

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