Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g14169 Brassica carinata HOM05D004410 ORTHO05D006134 1.0e-94 350.1 182 100.0
C02p14420 Brassica napus HOM05D004410 ORTHO05D006134 1.0e-94 350.1 182 100.0
BolC2t07566H Brassica oleracea HOM05D004410 ORTHO05D006134 1.0e-94 350.1 182 100.0
Nitab4.5_0000033g0380 Nicotiana tabacum HOM05D004410 ORTHO05D006134 8.5e-70 267.3 180 76.7
C03p15070 Brassica napus HOM05D004410 ORTHO05D006134 9.8e-66 253.8 292 55.1
BolC3t13949H Brassica oleracea HOM05D004410 ORTHO05D006134 9.8e-66 253.8 292 55.1
Thhalv10014295m.g Eutrema salsugineum HOM05D004410 ORTHO05D006134 9.8e-66 253.8 290 55.5
Sp6g19010 Schrenkiella parvula HOM05D004410 ORTHO05D006134 1.7e-65 253.1 291 55.3
BcaB05g22331 Brassica carinata HOM05D004410 ORTHO05D006134 6.3e-65 251.1 290 55.9
AL8G33250 Arabidopsis lyrata HOM05D004410 ORTHO05D006134 4.5e-63 245.0 293 52.9
Nitab4.5_0003040g0070 Nicotiana tabacum HOM05D004410 ORTHO05D006134 1.3e-62 243.4 243 57.6
A03p12910 Brassica napus HOM05D004410 ORTHO05D006134 2.3e-62 242.7 293 54.3
A10p17910 Brassica napus HOM05D004410 ORTHO05D006134 2.3e-62 242.7 293 54.3
Carub.0008s1778 Capsella rubella HOM05D004410 ORTHO05D006134 4.3e-61 238.4 293 51.9
Aa31sc36G40 Aethionema arabicum HOM05D004410 ORTHO05D006134 5.6e-61 238.0 294 52.4
CARHR271080 Cardamine hirsuta HOM05D004410 ORTHO05D006134 3.6e-60 235.3 295 51.2
Nitab4.5_0000782g0050 Nicotiana tabacum HOM05D004410 ORTHO05D006134 4.7e-60 235.0 250 55.2
AT5G57280 Arabidopsis thaliana HOM05D004410 ORTHO05D006134 8.0e-60 234.2 293 51.5
Thecc.09G180400 Theobroma cacao HOM05D004410 ORTHO05D006134 8.0e-60 234.2 295 50.8
Cfa005486 Carpinus fangiana HOM05D004410 ORTHO05D006134 3.0e-59 232.3 295 49.8
Cpa.g.sc95.31 Carica papaya HOM05D004410 ORTHO05D006134 8.9e-59 230.7 294 50.3
Duzib170G0185 Durio zibethinus HOM05D004410 ORTHO05D006134 1.2e-58 230.3 295 50.2
Cfa013429 Carpinus fangiana HOM05D004410 ORTHO05D006134 1.5e-58 229.9 295 49.5
Eucgr.L02823 Eucalyptus grandis HOM05D004410 ORTHO05D006134 1.5e-58 229.9 294 49.7
Eucgr.C02260 Eucalyptus grandis HOM05D004410 ORTHO05D006134 2.6e-58 229.2 294 49.3
Gorai.004G025800 Gossypium raimondii HOM05D004410 ORTHO05D006134 3.4e-58 228.8 295 49.8
PSO210G0218 Papaver somniferum HOM05D004410 ORTHO05D006134 5.7e-58 228.0 294 50.0
PSO210G4717 Papaver somniferum HOM05D004410 ORTHO05D006134 5.7e-58 228.0 294 50.0
THA.LOC104817784 Tarenaya hassleriana HOM05D004410 ORTHO05D006134 5.7e-58 228.0 297 50.8
Dinv26445 Davidia involucrata HOM05D004410 ORTHO05D006134 7.5e-58 227.6 296 49.0
Gohir.D08G028700 Gossypium hirsutum HOM05D004410 ORTHO05D006134 1.3e-57 226.9 295 49.5
Lj5C681T1 Lonicera japonica HOM05D004410 ORTHO05D006134 2.9e-57 225.7 294 48.3
Lj7C624G8 Lonicera japonica HOM05D004410 ORTHO05D006134 3.7e-57 225.3 294 48.6
GSVIVG01010906001 Vitis vinifera HOM05D004410 ORTHO05D006134 3.7e-57 225.3 295 48.1
CsaV3_5G008380 Cucumis sativus L. HOM05D004410 ORTHO05D006134 4.9e-57 224.9 293 48.8
ECA236G3126 Erigeron canadensis HOM05D004410 ORTHO05D006134 6.4e-57 224.6 295 49.5
CiPaw.08G034000 Carya illinoinensis HOM05D004410 ORTHO05D006134 1.1e-56 223.8 295 48.1
COL.COLO4_23558 Corchorus olitorius HOM05D004410 ORTHO05D006134 1.1e-56 223.8 295 48.8
TAR626G0361 Trochodendron aralioides HOM05D004410 ORTHO05D006134 1.1e-56 223.8 297 49.2
Gohir.A08G018100 Gossypium hirsutum HOM05D004410 ORTHO05D006134 1.4e-56 223.4 295 48.8
CANSAT56G1932 Cannabis sativa HOM05D004410 ORTHO05D006134 1.8e-56 223.0 297 47.1
Migut.D01496 Erythranthe guttata HOM05D004410 ORTHO05D006134 1.8e-56 223.0 296 47.6
Solyc06g072250.3 Solanum lycopersicum HOM05D004410 ORTHO05D006134 1.8e-56 223.0 293 47.4
Sopen06g028570 Solanum pennellii HOM05D004410 ORTHO05D006134 1.8e-56 223.0 293 47.4
CDE06G0833 Ceratophyllum demersum HOM05D004410 ORTHO05D006134 4.1e-56 221.9 294 47.3
Ciclev10009088m.g Citrus clementina HOM05D004410 ORTHO05D006134 4.1e-56 221.9 295 48.1
Aqoxy3G03862 Aquilegia oxysepala HOM05D004410 ORTHO05D006134 5.4e-56 221.5 296 47.6
MELO3C008596.2 Cucumis melo HOM05D004410 ORTHO05D006134 5.4e-56 221.5 293 48.5
Rhsim12G0146500 Rhododendron simsii HOM05D004410 ORTHO05D006134 5.4e-56 221.5 293 48.1
SalBow8G1532 Salvia bowleyana HOM05D004410 ORTHO05D006134 5.4e-56 221.5 296 47.6
MSTRG.4318 Avicennia marina HOM05D004410 ORTHO05D006134 7.0e-56 221.1 295 48.5
Oeu038397.1 Olea europaea HOM05D004410 ORTHO05D006134 7.0e-56 221.1 295 48.5
Cc09_g07700 Coffea canephora HOM05D004410 ORTHO05D006134 9.2e-56 220.7 295 47.5
CSS0020745 Camellia sinensis var. sinensis HOM05D004410 ORTHO05D006134 1.2e-55 220.3 293 47.8
CANSAT78G0037 Cannabis sativa HOM05D004410 ORTHO05D006134 1.2e-55 220.3 282 48.6
CANSAT78G1648 Cannabis sativa HOM05D004410 ORTHO05D006134 1.2e-55 220.3 282 48.6
arahy.Tifrunner.gnm1.ann1.2H7I9L Arachis hypogaea HOM05D004410 ORTHO05D006134 1.6e-55 219.9 293 48.1
arahy.Tifrunner.gnm1.ann1.FB81IM Arachis hypogaea HOM05D004410 ORTHO05D006134 1.6e-55 219.9 293 48.1
Sed0003098 Sechium edule HOM05D004410 ORTHO05D006134 1.6e-55 219.9 292 46.9
CANSAT21G0708 Cannabis sativa HOM05D004410 ORTHO05D006134 2.0e-55 219.5 286 47.9
Lsat_1_v5_gn_8_69561 Lactuca sativa HOM05D004410 ORTHO05D005614 2.0e-55 219.5 300 47.3
CAN.G65.73 Capsicum annuum HOM05D004410 ORTHO05D006134 3.5e-55 218.8 293 46.8
Nitab4.5_0000339g0120 Nicotiana tabacum HOM05D004410 ORTHO05D006134 5.9e-55 218.0 293 46.1
Glyma.17G060900 Glycine max HOM05D004410 ORTHO05D006134 1.0e-54 217.2 294 47.3
AUR62021333 Chenopodium quinoa HOM05D004410 ORTHO05D006134 1.3e-54 216.9 286 48.3
CANSAT78G1079 Cannabis sativa HOM05D004410 ORTHO05D006134 1.7e-54 216.5 282 47.9
Manes.06G021200 Manihot esculenta HOM05D004410 ORTHO05D006134 1.7e-54 216.5 295 47.8
MELO3C008923.2 Cucumis melo HOM05D004410 ORTHO05D006134 3.0e-54 215.7 293 47.1
HanXRQChr06g0179561 Helianthus annuus HOM05D004410 ORTHO05D006134 3.0e-54 215.7 295 47.1
Potri.001G338700 Populus trichocarpa HOM05D004410 ORTHO05D006134 3.9e-54 215.3 293 45.7
RcHm_v2.0_Chr4g0400231 Rosa chinensis HOM05D004410 ORTHO05D006134 5.0e-54 214.9 293 46.8
Haze_21974 Corylus avellana HOM05D004410 ORTHO05D006134 6.6e-54 214.5 135 82.2
Actinidia40404 Actinidia chinensis HOM05D004410 ORTHO05D006134 1.5e-53 213.4 273 49.8
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 1.5e-53 213.4 283 47.3
Sc14g0001390 Simmondsia chinensis HOM05D004410 ORTHO05D006134 1.9e-53 213.0 295 45.8
EL10Ac8g18319 Beta vulgaris HOM05D004410 ORTHO05D006134 2.5e-53 212.6 295 47.8
AUR62033248 Chenopodium quinoa HOM05D004410 ORTHO05D006134 3.3e-53 212.2 290 47.6
FvH4_4g07620 Fragaria vesca HOM05D004410 ORTHO05D006134 3.3e-53 212.2 293 46.1
TPR.G5373 Trifolium pratense HOM05D004410 ORTHO05D006134 3.3e-53 212.2 292 46.9
Oeu016123.1 Olea europaea HOM05D004410 ORTHO05D006134 7.3e-53 211.1 324 44.8
Potri.018G049800 Populus trichocarpa HOM05D004410 ORTHO05D006134 7.3e-53 211.1 293 45.1
QL11p004818 Quercus lobata HOM05D004410 ORTHO05D006134 7.3e-53 211.1 294 45.9
Ah.14g083650 Amaranthus hybridus HOM05D004410 ORTHO05D006134 9.5e-53 210.7 294 46.6
Hund26318 Selenicereus undatus HOM05D004410 ORTHO05D006134 9.5e-53 210.7 295 46.1
VMungo1215G0063 Vigna mungo HOM05D004410 ORTHO05D006134 1.6e-52 209.9 295 46.4
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 2.1e-52 209.5 289 47.4
FAN22G1351 Fragaria x ananassa HOM05D004410 ORTHO05D006134 2.1e-52 209.5 293 45.4
PGSC0003DMG400027051 Solanum tuberosum HOM05D004410 ORTHO05D006134 2.1e-52 209.5 294 45.9
Lalb_Chr07g0180591 Lupinus albus HOM05D004410 ORTHO05D006134 4.7e-52 208.4 294 45.9
PGR044G0126 Punica granatum HOM05D004410 ORTHO05D006134 4.7e-52 208.4 325 43.4
TWI36G0301 Tripterygium wilfordii HOM05D004410 ORTHO05D006134 6.2e-52 208.0 295 45.8
Zm00001eb258180 Zea mays HOM05D004410 ORTHO05D006134 6.2e-52 208.0 295 43.7
Ah.09g230150 Amaranthus hybridus HOM05D004410 ORTHO05D006134 8.0e-52 207.6 275 49.1
CSS0004658 Camellia sinensis var. sinensis HOM05D004410 ORTHO05D006134 8.0e-52 207.6 293 46.4
FAN07G0604 Fragaria x ananassa HOM05D004410 ORTHO05D006134 8.0e-52 207.6 293 45.4
TWI75G1515 Tripterygium wilfordii HOM05D004410 ORTHO05D006134 1.0e-51 207.2 329 42.2
Psat0s4042g0040 Pisum sativum HOM05D004410 ORTHO05D006134 1.4e-51 206.8 297 45.8
FAN17G1447 Fragaria x ananassa HOM05D004410 ORTHO05D006134 5.2e-51 204.9 311 43.4
Nn8g40987 Nelumbo nucifera HOM05D004410 ORTHO05D006134 6.8e-51 204.5 135 77.8
Sabra03G0001500 Salix brachista HOM05D004410 ORTHO05D006134 6.8e-51 204.5 307 43.6
Os02g0804300 Oryza sativa ssp. japonica HOM05D004410 ORTHO05D006134 1.5e-50 203.4 297 43.8
FAN12G4072 Fragaria x ananassa HOM05D004410 ORTHO05D006134 3.4e-50 202.2 313 42.8
Glyma.13G099200 Glycine max HOM05D004410 ORTHO05D006134 3.4e-50 202.2 295 46.1
unitig_26.g9274 Utricularia gibba HOM05D004410 ORTHO05D006134 9.8e-50 200.7 295 45.4
MD13G1245300 Malus domestica HOM05D004410 ORTHO05D006134 1.7e-49 199.9 294 45.6
Phvul.003G141775 Phaseolus vulgaris HOM05D004410 ORTHO05D006134 1.7e-49 199.9 296 45.3
SGA_v2.0_scaffold172G39079 Striga asiatica HOM05D004410 ORTHO05D006134 1.7e-49 199.9 135 74.8
Lj3g0011551 Lotus japonicus HOM05D004410 ORTHO05D006134 2.2e-49 199.5 297 45.5
SGA_v2.0_scaffold36G14352 Striga asiatica HOM05D004410 ORTHO05D006134 6.4e-49 198.0 135 74.1
Lj3g0017980 Lotus japonicus HOM05D004410 ORTHO05D006134 1.1e-48 197.2 296 43.9
Prupe.1G079400 Prunus persica HOM05D004410 ORTHO05D006134 1.1e-48 197.2 293 44.7
CANSAT78G0098 Cannabis sativa HOM05D004410 ORTHO05D006134 1.9e-48 196.4 135 74.1
SEGI_20363 Sequoiadendron giganteum HOM05D004410 ORTHO05D006134 5.4e-48 194.9 294 43.5
BraA03t10599Z Brassica rapa HOM05D004410 ORTHO05D006134 1.2e-47 193.7 258 50.4
MD16G1253000 Malus domestica HOM05D004410 ORTHO05D006134 1.2e-47 193.7 295 45.1
ATR0561G198 Amborella trichopoda HOM05D004410 ORTHO05D006134 1.7e-46 189.9 135 72.6
Mapoly0020s0093 Marchantia polymorpha HOM05D004410 ORTHO05D006134 3.9e-46 188.7 295 42.4
vmacro16466 Vaccinium macrocarpon HOM05D004410 ORTHO05D006134 5.0e-46 188.3 380 37.6
Peaxi162Scf00171g00233 Petunia axillaris HOM05D004410 ORTHO05D006134 8.6e-46 187.6 268 44.4
Pp3c12_7620 Physcomitrium patens HOM05D004410 ORTHO05D006134 1.1e-45 187.2 141 71.6
SMO367G1042 Selaginella moellendorffii HOM05D004410 ORTHO05D006134 2.5e-45 186.0 296 42.6
Medtr4g007420 Medicago truncatula HOM05D004410 ORTHO05D006134 4.3e-45 185.3 288 41.0
AagrBONN_evm.TU.Sc2ySwM_344.4914 Anthoceros agrestis HOM05D004410 ORTHO05D006134 7.3e-45 184.5 297 44.1
Sabra03G0004700 Salix brachista HOM05D004410 ORTHO05D006134 4.7e-44 181.8 326 40.2
TPR.G26767 Trifolium pratense HOM05D004410 ORTHO05D006134 2.6e-42 176.0 287 39.4
TAR383G0389 Trochodendron aralioides HOM05D004410 ORTHO05D006134 2.6e-42 176.0 108 82.4
ClCG11G007510 Citrullus lanatus HOM05D004410 ORTHO05D006134 4.4e-42 175.3 293 43.7
CBR_g3667 Chara braunii HOM05D004410 ORTHO05D006134 9.8e-42 174.1 135 65.2
AagrBONN_evm.TU.Sc2ySwM_344.3468 Anthoceros agrestis HOM05D004410 ORTHO05D006134 3.2e-40 169.1 135 63.7
CANSAT78G0925 Cannabis sativa HOM05D004410 ORTHO05D006134 3.2e-40 169.1 111 76.6
Cre09.g398104 Chlamydomonas reinhardtii HOM05D004410 ORTHO05D006134 3.5e-39 165.6 142 62.0
Atru.chr12.1677 Acer truncatum HOM05D004410 ORTHO05D006134 1.9e-37 159.8 273 41.0
MBI13_g31549_MAGBIO Magnolia biondii HOM05D004410 ORTHO05D006134 1.1e-35 154.1 140 62.9
MCO01G124 Micromonas commoda HOM05D004410 ORTHO05D006134 2.3e-35 152.9 144 54.2
PSO210G2992 Papaver somniferum HOM05D004410 ORTHO05D006134 1.9e-32 143.3 88 83.0
Medtr4g127640 Medicago truncatula HOM05D004410 ORTHO05D006134 3.5e-31 139.0 238 39.9
PRCOL_00001013 Prasinoderma coloniale HOM05D004410 ORTHO05D006134 2.3e-30 136.3 133 54.1
C03p79720 Brassica napus HOM05D004410 ORTHO05D027626 3.3e-29 132.5 73 89.0
BolC5t31886H Brassica oleracea HOM05D004410 ORTHO05D027626 3.3e-29 132.5 73 89.0
BcaC05g27254 Brassica carinata HOM05D004410 ORTHO05D027626 1.2e-28 130.6 72 88.9
Haze_27417 Corylus avellana HOM05D004410 ORTHO05D006134 7.1e-24 114.8 137 47.4
CAN.G65.105 Capsicum annuum HOM05D004410 ORTHO05D006134 2.1e-23 113.2 79 65.8
Glyma.17G179900 Glycine max HOM05D004410 ORTHO05D027626 1.7e-22 110.2 98 61.2
Ca_20535_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 2.3e-22 109.8 89 65.2
A02p08640 Brassica napus HOM05D004410 ORTHO05D097625 5.1e-22 108.6 126 54.8
Ca_20536_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 6.6e-22 108.2 89 64.0
Ca_30867_v3 Cicer arietinum L. HOM05D004410 ORTHO05D034587 6.6e-22 108.2 89 64.0
Peaxi162Scf03693g00003 Petunia axillaris HOM05D004410 ORTHO05D006134 1.3e-20 104.0 165 43.0
Cfa026974 Carpinus fangiana HOM05D004410 ORTHO05D006134 5.3e-19 98.6 113 53.1
Dinv25402 Davidia involucrata HOM05D004410 ORTHO05D006134 7.1e-16 88.2 208 34.6
MCO02G313 Micromonas commoda HOM05D004410 ORTHO05D006134 8.7e-14 81.3 105 42.9
Medtr4g007390 Medicago truncatula HOM05D004410 ORTHO05D006134 9.0e-11 71.2 62 59.7
CANSAT78G2262 Cannabis sativa HOM05D004410 ORTHO05D006134 2.0e-10 70.1 55 67.3
GSVIVG01006242001 Vitis vinifera HOM05D004410 ORTHO05D006134 6.4e-09 65.1 61 60.7
Ca_20516_v3 Cicer arietinum L. HOM05D004410 ORTHO05D147600 9.3e-08 61.2 47 61.7
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 6.7e-06 55.1 158 29.7


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