Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13998 Brassica carinata HOM05D030066 ORTHO05D032172 1.3e-157 559.7 291 100.0
C02p12370 Brassica napus HOM05D030066 ORTHO05D032172 9.6e-148 526.9 279 98.6
BolC2t07337H Brassica oleracea HOM05D030066 ORTHO05D032172 1.4e-109 400.2 225 94.2
A02p07020 Brassica napus HOM05D004593 ORTHO05D003703 2.2e-27 127.1 332 36.1
BraA02t05782Z Brassica rapa HOM05D004593 ORTHO05D003703 3.8e-27 126.3 332 35.5
BcaB05g22526 Brassica carinata HOM05D004593 ORTHO05D003703 1.1e-26 124.8 333 34.2
BcaC03g13997 Brassica carinata HOM05D004593 ORTHO05D003703 3.9e-24 116.3 333 34.5
C02p12360 Brassica napus HOM05D004593 ORTHO05D003703 3.9e-24 116.3 333 34.5
BolC2t07336H Brassica oleracea HOM05D004593 ORTHO05D003703 3.9e-24 116.3 333 34.5
BcaC03g15247 Brassica carinata HOM05D030066 ORTHO05D091532 3.3e-23 113.2 64 90.6
C02p12180 Brassica napus HOM05D004593 ORTHO05D003703 1.3e-11 74.7 97 47.4
Thhalv10015422m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.9e-11 73.6 156 35.9
Thhalv10016021m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.9e-11 73.6 156 35.9
C03p13050 Brassica napus HOM05D004593 ORTHO05D003703 4.9e-11 72.8 106 43.4
BolC3t13768H Brassica oleracea HOM05D004593 ORTHO05D003703 4.9e-11 72.8 106 43.4
AT5G60180 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 1.1e-10 71.6 95 46.3
AT5G60110 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.5e-10 70.5 95 47.4
CARHR157270 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.5e-10 70.5 97 43.3
AL71U10060 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 5.5e-10 69.3 143 35.7
AL8G36700 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 5.5e-10 69.3 143 35.7
Thhalv10015510m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 7.1e-10 68.9 118 40.7
AL8G36790 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 1.2e-09 68.2 83 48.2
Thhalv10011949m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 1.2e-09 68.2 97 44.3
Aa31LG2G18740 Aethionema arabicum HOM05D004593 ORTHO05D003703 1.6e-09 67.8 89 46.1
AT1G21620 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 2.1e-09 67.4 97 43.3
BcaC04g19627 Brassica carinata HOM05D004593 ORTHO05D003703 2.7e-09 67.0 106 42.5
BcaNung07341 Brassica carinata HOM05D004593 ORTHO05D003703 2.7e-09 67.0 83 49.4
C09p52610 Brassica napus HOM05D004593 ORTHO05D003703 2.7e-09 67.0 83 49.4
BolC9t58127H Brassica oleracea HOM05D004593 ORTHO05D003703 2.7e-09 67.0 83 49.4
A03p11590 Brassica napus HOM05D004593 ORTHO05D003703 3.5e-09 66.6 97 42.3
BolC3t13805H Brassica oleracea HOM05D004593 ORTHO05D003703 3.5e-09 66.6 97 41.2
BraA03t10472Z Brassica rapa HOM05D004593 ORTHO05D003703 3.5e-09 66.6 97 42.3
Sp6g21760 Schrenkiella parvula HOM05D004593 ORTHO05D003703 3.5e-09 66.6 83 49.4
BcaB08g36222 Brassica carinata HOM05D004593 ORTHO05D003703 4.6e-09 66.2 97 45.4
Sp6g21810 Schrenkiella parvula HOM05D004593 ORTHO05D003703 4.6e-09 66.2 97 45.4
BcaC04g19662 Brassica carinata HOM05D004593 ORTHO05D003703 6.0e-09 65.9 108 41.7
A10p17000 Brassica napus HOM05D004593 ORTHO05D003703 6.0e-09 65.9 106 43.4
C09p52660 Brassica napus HOM05D004593 ORTHO05D003703 6.0e-09 65.9 108 41.7
BolC9t58133H Brassica oleracea HOM05D004593 ORTHO05D003703 6.0e-09 65.9 108 41.7
CARHR036840 Cardamine hirsuta HOM05D004593 ORTHO05D003703 7.9e-09 65.5 79 50.6
BcaB08g36242 Brassica carinata HOM05D004593 ORTHO05D003703 1.0e-08 65.1 80 51.2
BcaC04g19751 Brassica carinata HOM05D004593 ORTHO05D003703 1.0e-08 65.1 104 45.2
C03p13480 Brassica napus HOM05D004593 ORTHO05D003703 1.0e-08 65.1 97 41.2
C09p51990 Brassica napus HOM05D004593 ORTHO05D003703 1.0e-08 65.1 104 45.2
BolC9t58061H Brassica oleracea HOM05D004593 ORTHO05D003703 1.0e-08 65.1 104 45.2
Sp1g28540 Schrenkiella parvula HOM05D004593 ORTHO05D003703 1.0e-08 65.1 83 49.4
BcaB08g36269 Brassica carinata HOM05D004593 ORTHO05D003703 1.3e-08 64.7 103 45.6
A09p33820 Brassica napus HOM05D004593 ORTHO05D003703 1.3e-08 64.7 80 48.8
Carub.0008s2083 Capsella rubella HOM05D004593 ORTHO05D003703 1.3e-08 64.7 159 31.4
CARHR273860 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.3e-08 63.9 106 41.5
Thhalv10014036m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.3e-08 63.9 97 43.3
Thhalv10015334m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 2.3e-08 63.9 118 41.5
Sp6g20950 Schrenkiella parvula HOM05D004593 ORTHO05D003703 2.3e-08 63.9 144 36.1
A08p10760 Brassica napus HOM05D004593 ORTHO05D003703 3.0e-08 63.5 105 41.9
A10p16810 Brassica napus HOM05D004593 ORTHO05D003703 3.0e-08 63.5 84 50.0
BraA08t33073Z Brassica rapa HOM05D004593 ORTHO05D003703 3.0e-08 63.5 105 41.9
C09p52250 Brassica napus HOM05D004593 ORTHO05D003703 3.9e-08 63.2 106 41.5
BraA02t05768Z Brassica rapa HOM05D004593 ORTHO05D003703 3.9e-08 63.2 46 67.4
BraA10t43760Z Brassica rapa HOM05D004593 ORTHO05D003703 3.9e-08 63.2 84 50.0
BraA03t10471Z Brassica rapa HOM05D004593 ORTHO05D003703 6.7e-08 62.4 104 42.3
A10p16830 Brassica napus HOM05D004593 ORTHO05D003703 8.7e-08 62.0 103 42.7
A10p17250 Brassica napus HOM05D004593 ORTHO05D003703 8.7e-08 62.0 76 50.0
BraA10t43809Z Brassica rapa HOM05D004593 ORTHO05D003703 8.7e-08 62.0 76 50.0
CARHR118680 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.1e-07 61.6 81 48.1
CARHR285940 Cardamine hirsuta HOM05D004593 ORTHO05D003703 1.5e-07 61.2 79 50.6
C03p13470 Brassica napus HOM05D004593 ORTHO05D003703 1.9e-07 60.8 110 39.1
BolC3t13767H Brassica oleracea HOM05D004593 ORTHO05D003703 1.9e-07 60.8 106 40.6
Carub.0008s2091 Capsella rubella HOM05D004593 ORTHO05D003703 1.9e-07 60.8 160 31.2
AL8G35710 Arabidopsis lyrata HOM05D004593 ORTHO05D003703 2.5e-07 60.5 112 37.5
BcaC04g19796 Brassica carinata HOM05D004593 ORTHO05D003703 2.5e-07 60.5 104 44.2
C09p51570 Brassica napus HOM05D004593 ORTHO05D003703 2.5e-07 60.5 104 44.2
BolC9t58016H Brassica oleracea HOM05D004593 ORTHO05D003703 2.5e-07 60.5 104 44.2
CARHR273750 Cardamine hirsuta HOM05D004593 ORTHO05D003703 2.5e-07 60.5 102 39.2
A10p16490 Brassica napus HOM05D004593 ORTHO05D003703 3.3e-07 60.1 82 48.8
A10p17310 Brassica napus HOM05D004593 ORTHO05D003703 3.3e-07 60.1 127 37.0
BolC3t13804H Brassica oleracea HOM05D004593 ORTHO05D003703 3.3e-07 60.1 124 36.3
BraA10t43732Z Brassica rapa HOM05D004593 ORTHO05D003703 3.3e-07 60.1 82 48.8
Thhalv10015341m.g Eutrema salsugineum HOM05D004593 ORTHO05D003703 3.3e-07 60.1 97 45.4
C03p13510 Brassica napus HOM05D004593 ORTHO05D003703 4.3e-07 59.7 97 40.2
BolC3t13806H Brassica oleracea HOM05D004593 ORTHO05D003703 4.3e-07 59.7 97 40.2
BraA10t43761Z Brassica rapa HOM05D004593 ORTHO05D003703 4.3e-07 59.7 100 43.0
C03p13530 Brassica napus HOM05D004593 ORTHO05D003703 5.7e-07 59.3 111 40.5
BolC3t13808H Brassica oleracea HOM05D004593 ORTHO05D003703 5.7e-07 59.3 111 40.5
A03p11320 Brassica napus HOM05D004593 ORTHO05D003703 7.4e-07 58.9 99 42.4
BraA03t10445Z Brassica rapa HOM05D004593 ORTHO05D003703 7.4e-07 58.9 99 42.4
BcaB01g06359 Brassica carinata HOM05D004593 ORTHO05D003703 9.6e-07 58.5 106 39.6
BcaC01g06510 Brassica carinata HOM05D004593 ORTHO05D003703 1.6e-06 57.8 97 39.2
BraA10t43816Z Brassica rapa HOM05D004593 ORTHO05D003703 1.6e-06 57.8 108 39.8
BcaB01g04563 Brassica carinata HOM05D004593 ORTHO05D003703 2.1e-06 57.4 142 36.6
BraA03t10473Z Brassica rapa HOM05D004593 ORTHO05D003703 2.1e-06 57.4 113 42.5
A03p11600 Brassica napus HOM05D004593 ORTHO05D003703 2.8e-06 57.0 116 39.7
BcaB01g04566 Brassica carinata HOM05D004593 ORTHO05D003703 3.7e-06 56.6 102 39.2
A03p11580 Brassica napus HOM05D004593 ORTHO05D003703 3.7e-06 56.6 148 33.8
Carub.0008s2528 Capsella rubella HOM05D004593 ORTHO05D003703 3.7e-06 56.6 122 41.0
AT5G59280 Arabidopsis thaliana HOM05D004593 ORTHO05D003703 8.2e-06 55.5 108 38.0
C09p52000 Brassica napus HOM05D004593 ORTHO05D003703 8.2e-06 55.5 100 43.0
BolC9t58062H Brassica oleracea HOM05D004593 ORTHO05D003703 8.2e-06 55.5 100 43.0


User provided reference genes

Program Settings