Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g13770 Brassica carinata HOM05D005173 ORTHO05D006214 1.5e-161 572.8 284 100.0
BcaB05g22843 Brassica carinata HOM05D005173 ORTHO05D006214 3.5e-126 455.3 283 84.1
BolC2t07046H Brassica oleracea HOM05D005173 ORTHO05D006214 3.5e-126 455.3 283 84.1
A02p06290 Brassica napus HOM05D005173 ORTHO05D006214 4.5e-126 454.9 283 84.1
BraA02t05577Z Brassica rapa HOM05D005173 ORTHO05D006214 4.5e-126 454.9 283 84.1
Sp6g23940 Schrenkiella parvula HOM05D005173 ORTHO05D006214 5.2e-122 441.4 283 80.9
A10p19490 Brassica napus HOM05D005173 ORTHO05D006214 8.8e-122 440.7 283 80.9
BraA10t44025Z Brassica rapa HOM05D005173 ORTHO05D006214 8.8e-122 440.7 283 80.9
BcaB08g36505 Brassica carinata HOM05D005173 ORTHO05D006214 4.8e-120 434.9 283 80.2
BolC9t58435H Brassica oleracea HOM05D005173 ORTHO05D006214 1.4e-119 433.3 283 79.5
BcaC04g19437 Brassica carinata HOM05D005173 ORTHO05D006214 2.4e-119 432.6 283 79.2
C09p55690 Brassica napus HOM05D005173 ORTHO05D006214 2.4e-119 432.6 283 79.2
Thhalv10014184m.g Eutrema salsugineum HOM05D005173 ORTHO05D006214 4.1e-119 431.8 283 78.4
AL6G32050 Arabidopsis lyrata HOM05D005173 ORTHO05D006214 8.5e-117 424.1 283 78.1
Carub.0006s1885 Capsella rubella HOM05D005173 ORTHO05D006214 8.5e-117 424.1 283 77.7
CARHR192290 Cardamine hirsuta HOM05D005173 ORTHO05D006214 8.5e-117 424.1 283 77.4
AT5G20520 Arabidopsis thaliana HOM05D005173 ORTHO05D006214 1.9e-116 422.9 283 77.4
Sopen07g020470 Solanum pennellii HOM05D005173 ORTHO05D006214 1.4e-114 416.8 283 74.2
PGSC0003DMG400020952 Solanum tuberosum HOM05D005173 ORTHO05D006214 1.4e-114 416.8 283 74.2
Solyc07g041200.3 Solanum lycopersicum HOM05D005173 ORTHO05D006214 3.0e-114 415.6 283 73.9
THA.LOC104799624 Tarenaya hassleriana HOM05D005173 ORTHO05D006214 4.0e-114 415.2 283 75.6
Gorai.013G226300 Gossypium raimondii HOM05D005173 ORTHO05D006214 2.6e-113 412.5 283 74.2
Atru.chr7.1658 Acer truncatum HOM05D005173 ORTHO05D006214 1.7e-112 409.8 283 73.1
Cpa.g.sc28.94 Carica papaya HOM05D005173 ORTHO05D006214 6.3e-112 407.9 283 72.1
GSVIVG01015121001 Vitis vinifera HOM05D005173 ORTHO05D006214 7.0e-111 404.4 283 73.1
CAN.G88.5 Capsicum annuum HOM05D005173 ORTHO05D006214 1.2e-110 403.7 283 72.1
Thecc.09G081500 Theobroma cacao HOM05D005173 ORTHO05D006214 1.2e-110 403.7 283 72.8
Potri.006G145200 Populus trichocarpa HOM05D005173 ORTHO05D006214 7.7e-110 401.0 283 71.0
Gohir.A13G192200 Gossypium hirsutum HOM05D005173 ORTHO05D006214 1.0e-109 400.6 283 71.7
MELO3C015504.2 Cucumis melo HOM05D005173 ORTHO05D006214 1.7e-109 399.8 283 70.7
Hma1.2p1_0797F.1_g219350 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 1.7e-109 399.8 283 71.7
ClCG03G015280 Citrullus lanatus HOM05D005173 ORTHO05D006214 2.2e-109 399.4 283 70.7
Gohir.D13G197600 Gossypium hirsutum HOM05D005173 ORTHO05D006214 2.2e-109 399.4 283 72.4
Nn8g38732 Nelumbo nucifera HOM05D005173 ORTHO05D006214 2.2e-109 399.4 283 71.7
Phvul.003G133200 Phaseolus vulgaris HOM05D005173 ORTHO05D006214 2.2e-109 399.4 283 70.7
CsaV3_1G040770 Cucumis sativus L. HOM05D005173 ORTHO05D006214 2.9e-109 399.1 283 70.7
Potri.018G064800 Populus trichocarpa HOM05D005173 ORTHO05D006214 2.9e-109 399.1 283 71.0
Dinv25585 Davidia involucrata HOM05D005173 ORTHO05D006214 3.8e-109 398.7 283 71.0
Lalb_Chr07g0181031 Lupinus albus HOM05D005173 ORTHO05D006214 3.8e-109 398.7 283 70.7
Ciclev10008959m.g Citrus clementina HOM05D005173 ORTHO05D006214 5.0e-109 398.3 283 70.7
Lalb_Chr12g0200011 Lupinus albus HOM05D005173 ORTHO05D006214 5.0e-109 398.3 283 69.3
MD15G1213300 Malus domestica HOM05D005173 ORTHO05D006214 6.5e-109 397.9 283 70.7
Lsat_1_v5_gn_5_142000 Lactuca sativa HOM05D005173 ORTHO05D006214 8.5e-109 397.5 283 70.7
Psat4g016960 Pisum sativum HOM05D005173 ORTHO05D006214 8.5e-109 397.5 295 68.8
VMungo1215G2902 Vigna mungo HOM05D005173 ORTHO05D006214 8.5e-109 397.5 283 70.3
Lj4g0027115 Lotus japonicus HOM05D005173 ORTHO05D006214 1.1e-108 397.1 295 67.8
MD02G1086100 Malus domestica HOM05D005173 ORTHO05D006214 1.5e-108 396.7 283 70.3
Actinidia39689 Actinidia chinensis HOM05D005173 ORTHO05D006214 1.9e-108 396.4 283 71.0
Manes.03G037700 Manihot esculenta HOM05D005173 ORTHO05D006214 2.5e-108 396.0 283 71.4
CSS0048515 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 3.2e-108 395.6 283 70.7
Glyma.13G107800 Glycine max HOM05D005173 ORTHO05D006214 3.2e-108 395.6 283 70.0
TAR636G1303 Trochodendron aralioides HOM05D005173 ORTHO05D006214 3.2e-108 395.6 283 71.4
Glyma.17G051500 Glycine max HOM05D005173 ORTHO05D006214 4.2e-108 395.2 283 70.0
RcHm_v2.0_Chr2g0094221 Rosa chinensis HOM05D005173 ORTHO05D006214 5.5e-108 394.8 283 70.3
TAR624G0255 Trochodendron aralioides HOM05D005173 ORTHO05D006214 5.5e-108 394.8 283 72.1
FAN23G0270 Fragaria x ananassa HOM05D005173 ORTHO05D006214 9.4e-108 394.0 283 70.0
Cc00_g19370 Coffea canephora HOM05D005173 ORTHO05D006214 1.6e-107 393.3 283 70.7
Sed0012764 Sechium edule HOM05D005173 ORTHO05D006214 1.6e-107 393.3 283 69.3
Sc18g0002360 Simmondsia chinensis HOM05D005173 ORTHO05D006214 1.6e-107 393.3 283 70.0
FvH4_1g08150 Fragaria vesca HOM05D005173 ORTHO05D006214 2.1e-107 392.9 281 70.8
Migut.L01541 Erythranthe guttata HOM05D005173 ORTHO05D006214 2.7e-107 392.5 283 70.0
EL10Ac8g19142 Beta vulgaris HOM05D005173 ORTHO05D006214 3.6e-107 392.1 283 70.3
Duzib150G1290 Durio zibethinus HOM05D005173 ORTHO05D006214 3.6e-107 392.1 281 71.2
PSO421G0551 Papaver somniferum HOM05D005173 ORTHO05D006214 3.6e-107 392.1 283 70.0
arahy.Tifrunner.gnm1.ann1.6AS4TW Arachis hypogaea HOM05D005173 ORTHO05D006214 4.7e-107 391.7 283 68.9
CANSAT56G2861 Cannabis sativa HOM05D005173 ORTHO05D006214 4.7e-107 391.7 283 69.3
FAN28G2824 Fragaria x ananassa HOM05D005173 ORTHO05D006214 4.7e-107 391.7 281 70.5
PGR142G0948 Punica granatum HOM05D005173 ORTHO05D006214 4.7e-107 391.7 281 70.5
CiPaw.03G210500 Carya illinoinensis HOM05D005173 ORTHO05D006214 6.1e-107 391.3 283 70.0
Ca_21308_v3 Cicer arietinum L. HOM05D005173 ORTHO05D006214 6.1e-107 391.3 283 70.0
FAN19G2713 Fragaria x ananassa HOM05D005173 ORTHO05D006214 6.1e-107 391.3 281 70.5
PSO063G3756 Papaver somniferum HOM05D005173 ORTHO05D006214 6.1e-107 391.3 283 69.6
Aqoxy7G01101 Aquilegia oxysepala HOM05D005173 ORTHO05D006214 8.0e-107 391.0 283 69.6
arahy.Tifrunner.gnm1.ann1.9Y0BJI Arachis hypogaea HOM05D005173 ORTHO05D006214 1.0e-106 390.6 283 68.6
QL02p061251 Quercus lobata HOM05D005173 ORTHO05D006214 1.0e-106 390.6 283 70.0
FAN26G2726 Fragaria x ananassa HOM05D005173 ORTHO05D006214 1.8e-106 389.8 281 70.1
Prupe.7G203600 Prunus persica HOM05D005173 ORTHO05D006214 1.8e-106 389.8 283 70.0
TWI32G0591 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 2.3e-106 389.4 283 69.6
HanXRQChr09g0237971 Helianthus annuus HOM05D005173 ORTHO05D006214 3.0e-106 389.0 283 69.6
Dinv42364 Davidia involucrata HOM05D005173 ORTHO05D006214 5.2e-106 388.3 283 70.0
FAN26G1854 Fragaria x ananassa HOM05D005173 ORTHO05D006214 5.2e-106 388.3 281 69.8
ECA234G3859 Erigeron canadensis HOM05D005173 ORTHO05D006214 6.8e-106 387.9 283 68.2
Lsat_1_v5_gn_7_34821 Lactuca sativa HOM05D005173 ORTHO05D006214 1.2e-105 387.1 283 69.3
COL.COLO4_18139 Corchorus olitorius HOM05D005173 ORTHO05D006214 1.5e-105 386.7 312 66.3
Sed0013811 Sechium edule HOM05D005173 ORTHO05D006214 1.5e-105 386.7 281 69.4
HanXRQChr01g0007561 Helianthus annuus HOM05D005173 ORTHO05D006214 2.0e-105 386.3 283 68.6
Manes.16G098000 Manihot esculenta HOM05D005173 ORTHO05D006214 2.0e-105 386.3 283 68.6
CDE04G2820 Ceratophyllum demersum HOM05D005173 ORTHO05D006214 7.5e-105 384.4 283 68.2
Medtr4g125660 Medicago truncatula HOM05D005173 ORTHO05D006214 7.5e-105 384.4 283 69.3
Eucgr.C00843 Eucalyptus grandis HOM05D005173 ORTHO05D006214 9.8e-105 384.0 283 68.6
TWI63G0548 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 2.2e-104 382.9 282 69.5
Nitab4.5_0001488g0160 Nicotiana tabacum HOM05D005173 ORTHO05D006214 4.9e-104 381.7 283 70.3
MSTRG.19482 Avicennia marina HOM05D005173 ORTHO05D006214 6.3e-104 381.3 286 68.2
Oeu054818.3 Olea europaea HOM05D005173 ORTHO05D006214 1.4e-103 380.2 341 60.1
Aa31LG1G14140 Aethionema arabicum HOM05D005173 ORTHO05D006214 2.7e-102 375.9 279 70.3
MSTRG.26457 Avicennia marina HOM05D005173 ORTHO05D006214 3.5e-102 375.6 286 67.1
Nitab4.5_0013150g0020 Nicotiana tabacum HOM05D005173 ORTHO05D006214 3.5e-102 375.6 283 69.6
MSTRG.10526 Avicennia marina HOM05D005173 ORTHO05D006214 2.3e-101 372.9 281 66.9
Duzib168G0179 Durio zibethinus HOM05D005173 ORTHO05D006214 2.5e-100 369.4 283 68.6
Sabra18G0057400 Salix brachista HOM05D005173 ORTHO05D006214 2.5e-100 369.4 349 58.2
Ah.14g085040 Amaranthus hybridus HOM05D005173 ORTHO05D006214 1.6e-99 366.7 283 66.8
DCAR_024724 Daucus carota HOM05D005173 ORTHO05D006214 2.1e-99 366.3 281 65.1
Haze_25966 Corylus avellana HOM05D005173 ORTHO05D006214 6.1e-99 364.8 346 56.6
SHI33752 Sapria himalayana HOM05D005173 ORTHO05D006214 6.1e-99 364.8 281 66.9
AUR62025172 Chenopodium quinoa HOM05D005173 ORTHO05D006214 2.0e-97 359.8 283 66.8
SGA_v2.0_scaffold21G09462 Striga asiatica HOM05D005173 ORTHO05D006214 2.0e-97 359.8 338 58.0
Lj7C682G9 Lonicera japonica HOM05D005173 ORTHO05D006214 2.6e-97 359.4 282 66.0
Sabra06G0114800 Salix brachista HOM05D005173 ORTHO05D006214 7.5e-97 357.8 291 63.6
Peaxi162Scf00246g00045 Petunia axillaris HOM05D005173 ORTHO05D006214 9.8e-97 357.5 268 69.0
Zm00001eb108940 Zea mays HOM05D005173 ORTHO05D006214 1.7e-96 356.7 281 64.4
AUR62029004 Chenopodium quinoa HOM05D005173 ORTHO05D006214 2.2e-96 356.3 283 66.4
vmacro17173 Vaccinium macrocarpon HOM05D005173 ORTHO05D006214 6.4e-96 354.8 383 53.3
Os07g0608300 Oryza sativa ssp. japonica HOM05D005173 ORTHO05D006214 1.4e-95 353.6 283 62.9
unitig_22.g5750 Utricularia gibba HOM05D005173 ORTHO05D006214 2.7e-94 349.4 282 65.2
SalBow1G6961 Salvia bowleyana HOM05D005173 ORTHO05D006214 5.6e-92 341.7 316 59.5
DCAR_028284 Daucus carota HOM05D005173 ORTHO05D006214 2.1e-91 339.7 291 60.8
HPP92_006149 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.8e-91 339.3 282 59.6
DCAR_031940 Daucus carota HOM05D005173 ORTHO05D006214 1.4e-90 337.0 273 61.5
Mapoly0002s0260 Marchantia polymorpha HOM05D005173 ORTHO05D006214 1.1e-87 327.4 281 59.1
SMO203G0271 Selaginella moellendorffii HOM05D005173 ORTHO05D006214 1.9e-87 326.6 286 59.8
Rhsim05G0012900 Rhododendron simsii HOM05D005173 ORTHO05D006214 1.2e-83 313.9 311 56.3
BcaB05g22835 Brassica carinata HOM05D005173 ORTHO05D006214 4.4e-81 305.4 205 78.5
Pp3c15_14310 Physcomitrium patens HOM05D005173 ORTHO05D006214 1.2e-75 287.3 278 55.8
ATR0598G148 Amborella trichopoda HOM05D005173 ORTHO05D006214 4.7e-75 285.4 232 63.8
CBR_g3819 Chara braunii HOM05D005173 ORTHO05D006214 4.3e-68 262.3 278 52.2
TPR.G9429 Trifolium pratense HOM05D005173 ORTHO05D006214 1.6e-67 260.4 163 77.3
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 2.6e-65 253.1 219 62.1
HPP92_009230 Vanilla planifolia HOM05D005173 ORTHO05D006214 2.3e-61 240.0 169 70.4
QL02p061362 Quercus lobata HOM05D005173 ORTHO05D006214 5.6e-52 208.8 172 62.2
BNapus_Darmor_BZH_scaffold_38p01550 Brassica napus HOM05D005173 ORTHO05D006214 1.4e-39 167.5 97 87.6
Rhsim03G0230600 Rhododendron simsii HOM05D005173 ORTHO05D006214 2.1e-38 163.7 196 50.0
Cre03.g160100 Chlamydomonas reinhardtii HOM05D005173 ORTHO05D006214 6.0e-38 162.2 274 36.5
TPR.G23232 Trifolium pratense HOM05D005173 ORTHO05D006214 5.9e-33 145.6 105 64.8
HPP92_009231 Vanilla planifolia HOM05D005173 ORTHO05D006214 1.6e-27 127.5 105 58.1
Cfa026742 Carpinus fangiana HOM05D005173 ORTHO05D006214 4.5e-25 119.4 283 32.9
SGA_v2.0_scaffold23G10070 Striga asiatica HOM05D005173 ORTHO05D006214 2.6e-20 103.6 112 52.7
ClCG07G005020 Citrullus lanatus HOM05D005173 ORTHO05D006214 1.3e-19 101.3 73 68.5
CSS0040146 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 2.9e-16 90.1 54 70.4
PRCOL_00002900 Prasinoderma coloniale HOM05D005173 ORTHO05D006214 2.1e-14 84.0 279 29.4
Hma1.2p1_0440F.1_g153610 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 2.6e-12 77.0 78 52.6
Lsat_1_v5_gn_2_31840 Lactuca sativa HOM05D005173 ORTHO05D006214 5.3e-10 69.3 52 65.4
Psat1g081920 Pisum sativum HOM05D000464 ORTHO05D000408 5.9e-09 65.9 218 26.1
Ca_04375_v3 Cicer arietinum L. HOM05D000464 ORTHO05D000408 1.0e-08 65.1 218 26.1
Lsat_1_v5_gn_5_98841 Lactuca sativa HOM05D005173 ORTHO05D006214 1.0e-08 65.1 74 47.3
Lalb_Chr02g0158151 Lupinus albus HOM05D000464 ORTHO05D000408 3.8e-08 63.2 216 26.4
Lj2g0002905 Lotus japonicus HOM05D000464 ORTHO05D000408 1.9e-07 60.8 212 25.5
Glyma.19G050600 Glycine max HOM05D000464 ORTHO05D000408 2.5e-07 60.5 196 25.0
Medtr6g018930 Medicago truncatula HOM05D000464 ORTHO05D000408 3.2e-07 60.1 178 26.4
Glyma.13G044600 Glycine max HOM05D000464 ORTHO05D000408 9.4e-07 58.5 196 25.5
THA.LOC104823854 Tarenaya hassleriana HOM05D000464 ORTHO05D000408 1.2e-06 58.2 197 25.4
Os12g0286600 Oryza sativa ssp. japonica HOM05D000464 ORTHO05D000408 1.6e-06 57.8 172 25.6
Phvul.004G067200 Phaseolus vulgaris HOM05D000464 ORTHO05D000408 2.1e-06 57.4 172 25.6
Lsat_1_v5_gn_2_79421 Lactuca sativa HOM05D000464 ORTHO05D000408 2.7e-06 57.0 195 24.6
Glyma.05G043600 Glycine max HOM05D000464 ORTHO05D000408 3.6e-06 56.6 172 28.5
Mapoly0127s0041 Marchantia polymorpha HOM05D000464 ORTHO05D000408 3.6e-06 56.6 172 27.3
CiPaw.04G043600 Carya illinoinensis HOM05D000464 ORTHO05D000408 4.7e-06 56.2 172 27.3


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