Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g08153 Brassica carinata HOM05D000203 ORTHO05D000135 6.0e-91 337.4 162 100.0
C04p57820 Brassica napus HOM05D000203 ORTHO05D000135 6.0e-91 337.4 162 100.0
BolC4t27301H Brassica oleracea HOM05D000203 ORTHO05D000135 3.1e-87 325.1 162 96.9
A04p21700 Brassica napus HOM05D000203 ORTHO05D000135 2.7e-83 312.0 162 93.8
BraA04t17734Z Brassica rapa HOM05D000203 ORTHO05D000135 7.8e-83 310.5 162 93.8
BcaB06g28235 Brassica carinata HOM05D000203 ORTHO05D000135 3.3e-57 225.3 138 77.5
Thhalv10028255m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 1.9e-49 199.5 165 62.4
Sp4g11470 Schrenkiella parvula HOM05D000203 ORTHO05D000135 3.1e-47 192.2 158 58.9
BraA07t29617Z Brassica rapa HOM05D000203 ORTHO05D000135 4.1e-39 165.2 159 55.3
A07p19100 Brassica napus HOM05D000203 ORTHO05D000135 2.0e-38 162.9 159 54.7
BcaB02g10179 Brassica carinata HOM05D000203 ORTHO05D000135 2.6e-38 162.5 160 56.9
BcaC02g10979 Brassica carinata HOM05D000203 ORTHO05D000135 1.7e-37 159.8 159 54.7
C04p22700 Brassica napus HOM05D000203 ORTHO05D000135 1.7e-37 159.8 159 54.7
Thhalv10017754m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 2.9e-37 159.1 133 61.7
BolC4t23768H Brassica oleracea HOM05D000203 ORTHO05D000135 5.0e-37 158.3 159 54.1
BcaB02g10175 Brassica carinata HOM05D000203 ORTHO05D000135 1.4e-36 156.8 159 54.1
CARHR121680 Cardamine hirsuta HOM05D000203 ORTHO05D000135 2.7e-35 152.5 140 53.6
CARHR121670 Cardamine hirsuta HOM05D000203 ORTHO05D000135 1.4e-31 140.2 137 52.6
Thhalv10027307m.g Eutrema salsugineum HOM05D000203 ORTHO05D023666 1.5e-20 103.6 163 40.5
AT4G36590 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 5.5e-20 101.7 158 41.1
CARHR121660 Cardamine hirsuta HOM05D000203 ORTHO05D000135 6.1e-19 98.2 107 47.7
CARHR121720 Cardamine hirsuta HOM05D000203 ORTHO05D000135 1.0e-18 97.4 132 42.4
Sp7g34230 Schrenkiella parvula HOM05D000203 ORTHO05D000135 3.4e-17 92.4 141 38.3
AL8G37040 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 4.4e-17 92.0 175 37.1
AT5G60440 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 1.7e-16 90.1 165 38.8
CARHR274100 Cardamine hirsuta HOM05D000203 ORTHO05D000135 1.7e-16 90.1 156 38.5
Carub.0008s2113 Capsella rubella HOM05D000203 ORTHO05D000135 4.8e-16 88.6 168 37.5
Thhalv10015908m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 8.3e-16 87.8 166 38.0
CARHR244920 Cardamine hirsuta HOM05D029978 ORTHO05D023666 2.4e-15 86.3 144 36.8
Carub.0007s0374 Capsella rubella HOM05D000203 ORTHO05D000135 9.1e-15 84.3 155 38.1
Sp6g22010 Schrenkiella parvula HOM05D000203 ORTHO05D000135 1.6e-14 83.6 154 37.7
Thhalv10012100m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 1.7e-13 80.1 163 38.0
BcaB08g36341 Brassica carinata HOM05D000203 ORTHO05D000135 6.5e-13 78.2 168 35.1
THA.LOC104809103 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 5.5e-12 75.1 144 37.5
CARHR244890 Cardamine hirsuta HOM05D029978 ORTHO05D023666 2.0e-09 66.6 155 32.3
THA.LOC104826501 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 3.4e-09 65.9 111 38.7
Sp3g17710 Schrenkiella parvula HOM05D000203 ORTHO05D000135 9.8e-09 64.3 144 35.4
A05p30070 Brassica napus HOM05D000203 ORTHO05D000135 2.2e-08 63.2 167 34.1
BraA05t21847Z Brassica rapa HOM05D000203 ORTHO05D000135 2.2e-08 63.2 169 36.1
THA.LOC104827420 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.8e-07 60.1 113 38.1
CARHR095150 Cardamine hirsuta HOM05D000203 ORTHO05D000135 9.2e-07 57.8 145 29.7
BcaB05g22648 Brassica carinata HOM05D000203 ORTHO05D000135 1.2e-06 57.4 153 31.4
AL3G33140 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 1.6e-06 57.0 136 32.4
Aa31LG8G6470 Aethionema arabicum HOM05D000203 ORTHO05D000135 4.5e-06 55.5 124 33.1
Thhalv10003426m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 7.7e-06 54.7 205 28.8
TWI59G1079 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 7.7e-06 54.7 137 31.4
TWI60G0466 Tripterygium wilfordii HOM05D000203 ORTHO05D000135 7.7e-06 54.7 147 32.7


User provided reference genes

Program Settings