Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 5.1e-165 584.3 294 100.0
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 5.6e-164 580.9 294 99.3
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 8.1e-163 577.0 294 98.3
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 3.1e-162 575.1 294 98.0
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 4.0e-162 574.7 294 98.0
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 2.0e-161 572.4 294 97.3
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 2.4e-154 548.9 294 92.9
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 2.4e-154 548.9 294 92.9
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 9.0e-154 547.0 294 92.5
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 1.2e-153 546.6 294 92.2
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 1.5e-153 546.2 294 92.5
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.1e-151 540.0 294 91.5
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 3.2e-151 538.5 291 92.4
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 5.5e-151 537.7 294 90.8
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 7.9e-150 533.9 294 90.1
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 7.4e-148 527.3 294 89.5
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.6e-147 526.2 294 88.8
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 8.2e-147 523.9 294 88.8
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 8.2e-147 523.9 294 88.1
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 2.0e-145 519.2 294 87.4
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 3.8e-144 515.0 294 87.4
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 6.5e-144 514.2 294 87.4
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 6.5e-144 514.2 293 86.3
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 8.5e-144 513.8 294 86.1
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 1.9e-143 512.7 294 87.1
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 4.2e-143 511.5 294 85.7
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 7.2e-143 510.8 294 85.7
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 7.2e-143 510.8 294 85.7
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 7.2e-143 510.8 294 85.7
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 1.6e-142 509.6 294 85.4
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 1.6e-142 509.6 294 85.4
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 2.7e-142 508.8 294 86.1
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 3.0e-141 505.4 291 86.3
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.3e-139 500.0 291 84.5
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 6.3e-139 497.7 289 84.4
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 1.8e-138 496.1 292 83.6
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 5.3e-138 494.6 292 83.2
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 4.5e-137 491.5 292 82.9
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 5.9e-137 491.1 291 82.8
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 5.9e-137 491.1 289 82.0
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 5.9e-137 491.1 292 82.9
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 5.9e-137 491.1 289 84.1
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 1.3e-136 490.0 291 81.8
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 2.9e-136 488.8 289 82.0
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 2.9e-136 488.8 289 81.3
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 5.0e-136 488.0 291 83.2
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 8.5e-136 487.3 289 81.3
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 1.6e-134 483.0 294 82.3
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 3.6e-134 481.9 290 81.4
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 7.9e-134 480.7 291 82.1
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 5.1e-133 478.0 289 81.7
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 8.8e-133 477.2 293 78.5
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 8.8e-133 477.2 290 80.7
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 1.1e-132 476.9 289 82.0
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.0e-132 476.1 291 81.1
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 3.3e-132 475.3 291 81.1
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.3e-132 475.3 294 81.0
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 3.3e-132 475.3 294 81.0
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 5.7e-132 474.6 288 81.9
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 9.7e-132 473.8 294 79.9
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 1.7e-131 473.0 289 80.3
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 2.8e-131 472.2 289 80.6
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 1.4e-130 469.9 288 80.2
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 1.8e-130 469.5 306 78.4
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 4.1e-130 468.4 292 79.1
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.2e-129 466.8 290 79.7
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 2.6e-129 465.7 289 78.9
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 2.6e-129 465.7 289 79.6
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 3.5e-129 465.3 289 79.9
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 3.5e-129 465.3 289 77.9
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 3.5e-129 465.3 289 78.2
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 5.9e-129 464.5 292 79.1
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 5.9e-129 464.5 293 78.5
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 1.0e-128 463.8 289 77.9
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 1.3e-128 463.4 294 78.2
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 2.2e-128 462.6 289 78.5
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 6.5e-128 461.1 294 78.6
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 6.5e-128 461.1 289 77.9
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 8.5e-128 460.7 289 78.2
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 1.1e-127 460.3 291 77.7
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 1.1e-127 460.3 289 77.2
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.1e-127 460.3 289 78.5
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 1.1e-127 460.3 289 78.5
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.5e-127 459.9 289 78.5
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 1.9e-127 459.5 291 78.0
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 2.5e-127 459.1 293 77.8
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 4.2e-127 458.4 289 78.5
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 7.2e-127 457.6 301 76.1
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 7.2e-127 457.6 286 79.7
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 7.2e-127 457.6 288 79.5
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 1.2e-126 456.8 289 77.2
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 1.2e-126 456.8 291 78.7
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.2e-126 456.8 290 77.9
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.6e-126 456.4 288 79.2
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.6e-126 456.4 290 79.0
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 4.7e-126 454.9 288 79.2
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 4.7e-126 454.9 289 77.9
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.0e-125 453.8 289 76.5
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 1.0e-125 453.8 329 72.3
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 4.0e-125 451.8 289 74.7
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 5.2e-125 451.4 292 77.4
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 6.7e-125 451.1 289 76.8
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 1.1e-124 450.3 289 76.5
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 3.3e-124 448.7 291 77.0
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 3.7e-123 445.3 287 78.0
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 6.3e-123 444.5 286 75.9
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 8.2e-123 444.1 289 74.7
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 3.1e-122 442.2 289 75.4
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 9.1e-122 440.7 301 73.1
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 1.6e-121 439.9 286 75.2
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 1.6e-121 439.9 289 74.0
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 1.6e-121 439.9 295 75.3
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 5.9e-121 438.0 286 75.2
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 5.9e-121 438.0 305 72.8
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 7.7e-121 437.6 292 76.0
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 1.5e-119 433.3 309 71.2
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.9e-119 433.0 292 75.3
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 1.6e-118 429.9 293 72.7
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 3.6e-118 428.7 294 72.8
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 6.1e-118 427.9 289 72.7
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 6.1e-118 427.9 294 72.4
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 2.3e-117 426.0 274 76.6
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.5e-116 423.3 296 72.0
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.6e-116 422.5 296 72.0
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.7e-115 419.9 260 80.8
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 1.7e-115 419.9 293 72.4
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 3.1e-114 415.6 447 53.2
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 4.5e-113 411.8 311 69.5
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 1.3e-112 410.2 300 71.3
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 3.2e-111 405.6 291 72.9
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 7.2e-111 404.4 286 70.6
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 1.6e-110 403.3 293 68.3
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 4.4e-108 395.2 255 75.7
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 5.7e-108 394.8 295 67.1
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 7.5e-108 394.4 289 65.7
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 8.3e-107 391.0 297 67.3
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 3.1e-106 389.0 257 74.7
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 5.4e-106 388.3 231 81.4
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.6e-105 386.7 289 64.7
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 1.5e-103 380.2 234 79.1
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.9e-103 379.8 289 63.3
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 4.7e-102 375.2 287 63.1
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 3.0e-96 355.9 231 74.0
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 2.1e-94 349.7 297 63.0
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 1.3e-91 340.5 294 57.1
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 9.2e-82 307.8 269 62.1
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 6.0e-81 305.1 203 74.9
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 2.1e-78 296.6 285 53.7
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 6.2e-78 295.0 287 51.6
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 1.4e-69 267.3 287 48.1
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 1.3e-67 260.8 281 46.6
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 2.4e-66 256.5 285 46.7
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 6.6e-64 248.4 163 71.8
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 4.3e-55 219.2 154 67.5
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 1.2e-52 211.1 151 72.2
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 7.6e-52 208.4 113 90.3
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 2.7e-49 199.9 139 73.4
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 1.0e-24 118.2 82 70.7
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 3.3e-23 113.2 78 74.4
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 9.7e-23 111.7 82 74.4
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 4.8e-22 109.4 146 43.2
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.4e-21 107.8 78 73.1
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 7.7e-20 102.1 75 66.7
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 2.2e-19 100.5 161 37.9
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 2.9e-19 100.1 61 78.7
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 3.8e-19 99.8 83 66.3
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 5.5e-18 95.9 83 66.3
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 5.2e-16 89.4 70 62.9
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 6.7e-16 89.0 57 73.7
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 2.0e-12 77.4 58 63.8
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 2.0e-12 77.4 58 63.8
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 1.1e-10 71.6 54 68.5
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 3.3e-07 60.1 59 61.0
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 7.5e-07 58.9 46 60.9
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 1.3e-06 58.2 38 78.9


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