Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g05301 Brassica carinata HOM05D015130 ORTHO05D017645 1.1e-84 316.6 161 100.0
A03p23590 Brassica napus HOM05D015130 ORTHO05D017645 3.9e-34 148.7 82 93.9
BraA03t11575Z Brassica rapa HOM05D015130 ORTHO05D017645 3.9e-34 148.7 82 93.9
BolC3t18511H Brassica oleracea HOM05D015130 ORTHO05D017645 6.9e-31 137.9 71 98.6
A06p28160 Brassica napus HOM05D015130 ORTHO05D017645 2.5e-28 129.4 76 89.5
C03p62540 Brassica napus HOM05D015130 ORTHO05D017645 2.5e-28 129.4 76 89.5
A02p28960 Brassica napus HOM05D015130 ORTHO05D017645 1.2e-27 127.1 69 92.8
A07p04430 Brassica napus HOM05D015130 ORTHO05D017645 2.5e-25 119.4 96 67.7
C08p14520 Brassica napus HOM05D015130 ORTHO05D017645 6.9e-23 111.3 74 81.1
BcaC01g01591 Brassica carinata HOM05D002119 ORTHO05D002209 1.6e-11 73.6 36 100.0
BcaB05g21493 Brassica carinata HOM05D000280 ORTHO05D006100 1.1e-07 60.8 45 71.1
Sp6g32810 Schrenkiella parvula HOM05D000280 ORTHO05D006100 1.1e-07 60.8 45 71.1
A02p00570 Brassica napus HOM05D000280 ORTHO05D006100 2.4e-07 59.7 45 71.1
C03p05380 Brassica napus HOM05D000280 ORTHO05D006100 2.4e-07 59.7 45 71.1
BraA02t05040Z Brassica rapa HOM05D000280 ORTHO05D006100 2.4e-07 59.7 45 71.1
BcaC03g13321 Brassica carinata HOM05D000280 ORTHO05D006100 3.1e-07 59.3 45 68.9
A03p04670 Brassica napus HOM05D000280 ORTHO05D006100 3.1e-07 59.3 45 68.9
C02p04560 Brassica napus HOM05D000280 ORTHO05D006100 3.1e-07 59.3 45 68.9
BolC2t06416H Brassica oleracea HOM05D000280 ORTHO05D006100 3.1e-07 59.3 45 68.9
BraA03t09807Z Brassica rapa HOM05D000280 ORTHO05D006100 3.1e-07 59.3 45 68.9
AT5G10630 Arabidopsis thaliana HOM05D000280 ORTHO05D006100 5.3e-07 58.5 45 68.9
Carub.0006s0912 Capsella rubella HOM05D000280 ORTHO05D006100 5.3e-07 58.5 45 68.9
BolC3t13051H Brassica oleracea HOM05D000280 ORTHO05D006100 1.6e-06 57.0 45 66.7


User provided reference genes

Program Settings