Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g03429 Brassica carinata HOM05D004187 ORTHO05D004890 3.9e-90 334.7 162 100.0
BcaC01g03430 Brassica carinata HOM05D004187 ORTHO05D004890 3.9e-90 334.7 162 100.0
C03p52670 Brassica napus HOM05D004187 ORTHO05D004890 3.9e-90 334.7 162 100.0
BolC3t17535H Brassica oleracea HOM05D004187 ORTHO05D004890 3.9e-90 334.7 162 100.0
A03p42920 Brassica napus HOM05D004187 ORTHO05D004890 3.1e-87 325.1 162 96.9
BraA03t13436Z Brassica rapa HOM05D004187 ORTHO05D004890 3.1e-87 325.1 162 96.9
Sp3g20440 Schrenkiella parvula HOM05D004187 ORTHO05D004890 1.3e-72 276.6 160 83.1
BcaB06g26379 Brassica carinata HOM05D004187 ORTHO05D004890 2.6e-70 268.9 162 80.2
BraA05t21487Z Brassica rapa HOM05D004187 ORTHO05D004890 2.2e-69 265.8 163 81.6
BcaC05g28028 Brassica carinata HOM05D004187 ORTHO05D004890 3.2e-68 261.9 162 79.0
C05p40440 Brassica napus HOM05D004187 ORTHO05D004890 3.2e-68 261.9 162 79.0
BolC5t32785H Brassica oleracea HOM05D004187 ORTHO05D004890 3.2e-68 261.9 162 79.0
A05p26020 Brassica napus HOM05D004187 ORTHO05D004890 5.5e-68 261.2 163 79.8
Carub.0003s2284 Capsella rubella HOM05D004187 ORTHO05D004890 1.9e-65 252.7 155 77.4
Thhalv10021679m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 7.4e-65 250.8 157 78.3
AL3G36980 Arabidopsis lyrata HOM05D004187 ORTHO05D004890 2.1e-64 249.2 163 73.6
AT3G22680 Arabidopsis thaliana HOM05D004187 ORTHO05D004890 2.1e-64 249.2 153 77.1
CARHR098560 Cardamine hirsuta HOM05D004187 ORTHO05D004890 2.9e-61 238.8 150 75.3
Aa31LG3G2350 Aethionema arabicum HOM05D004187 ORTHO05D004890 4.8e-56 221.5 160 68.8
Thhalv10017318m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 1.2e-54 216.9 172 66.9
THA.LOC104803042 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 7.6e-54 214.2 161 62.7
Thhalv10029384m.g Eutrema salsugineum HOM05D004187 ORTHO05D004890 1.1e-52 210.3 162 69.1
RcHm_v2.0_Chr4g0407591 Rosa chinensis HOM05D004187 ORTHO05D004890 3.5e-51 205.3 153 62.7
MD16G1197500 Malus domestica HOM05D004187 ORTHO05D004890 6.1e-51 204.5 161 60.2
Prupe.1G018500 Prunus persica HOM05D004187 ORTHO05D004890 7.9e-51 204.1 161 60.9
FvH4_4g00760 Fragaria vesca HOM05D004187 ORTHO05D004890 1.8e-50 203.0 156 59.6
FAN12G2319 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.8e-50 203.0 156 59.6
Gohir.A10G118400 Gossypium hirsutum HOM05D004187 ORTHO05D004890 3.0e-50 202.2 150 60.0
FAN22G0369 Fragaria x ananassa HOM05D004187 ORTHO05D004890 5.1e-50 201.4 156 59.6
Eucgr.H03428 Eucalyptus grandis HOM05D004187 ORTHO05D004890 1.1e-49 200.3 161 59.0
QL06p001566 Quercus lobata HOM05D004187 ORTHO05D004890 1.1e-49 200.3 165 57.0
CiPaw.02G122700 Carya illinoinensis HOM05D004187 ORTHO05D004890 1.5e-49 199.9 181 54.1
Nn1g02390 Nelumbo nucifera HOM05D004187 ORTHO05D004890 1.5e-49 199.9 157 59.9
FAN13G2545 Fragaria x ananassa HOM05D004187 ORTHO05D004890 1.9e-49 199.5 156 59.0
Potri.008G155800 Populus trichocarpa HOM05D004187 ORTHO05D004890 1.9e-49 199.5 161 57.1
Gorai.011G165600 Gossypium raimondii HOM05D004187 ORTHO05D004890 2.5e-49 199.1 150 59.3
Haze_11210 Corylus avellana HOM05D004187 ORTHO05D004890 3.3e-49 198.7 181 54.1
Gohir.D10G148300 Gossypium hirsutum HOM05D004187 ORTHO05D004890 3.3e-49 198.7 150 60.0
Sabra08G0118600 Salix brachista HOM05D004187 ORTHO05D004890 4.3e-49 198.4 161 57.1
Cfa008463 Carpinus fangiana HOM05D004187 ORTHO05D004890 5.7e-49 198.0 181 53.6
FvH4_5g32450 Fragaria vesca HOM05D004187 ORTHO05D004890 5.7e-49 198.0 156 59.0
FAN18G3642 Fragaria x ananassa HOM05D004187 ORTHO05D004890 5.7e-49 198.0 156 59.0
Thecc.04G235800 Theobroma cacao HOM05D002650 ORTHO05D002924 5.7e-49 198.0 133 64.7
TWI73G1209 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 5.7e-49 198.0 166 56.6
MBI11_g32998_MAGBIO Magnolia biondii HOM05D002650 ORTHO05D002924 7.4e-49 197.6 159 57.9
Rhsim04G0199500 Rhododendron simsii HOM05D004187 ORTHO05D004890 1.3e-48 196.8 157 59.9
Sed0024336 Sechium edule HOM05D004187 ORTHO05D004890 4.8e-48 194.9 159 62.9
Lalb_Chr05g0211101 Lupinus albus HOM05D004187 ORTHO05D004890 1.4e-47 193.4 120 69.2
Rhsim02G0027200 Rhododendron simsii HOM05D004187 ORTHO05D004890 2.4e-47 192.6 155 55.5
THA.LOC104808564 Tarenaya hassleriana HOM05D004187 ORTHO05D004890 2.4e-47 192.6 126 66.7
Dinv25939 Davidia involucrata HOM05D004187 ORTHO05D004890 3.1e-47 192.2 133 61.7
Ciclev10005993m.g Citrus clementina HOM05D004187 ORTHO05D004890 4.1e-47 191.8 156 56.4
TAR362G0393 Trochodendron aralioides HOM05D004187 ORTHO05D004890 4.1e-47 191.8 161 58.4
Duzib212G0360 Durio zibethinus HOM05D004187 ORTHO05D004890 5.3e-47 191.4 143 58.7
VMungo0251G0090 Vigna mungo HOM05D004187 ORTHO05D004890 5.3e-47 191.4 133 63.9
ClCG05G004990 Citrullus lanatus HOM05D004187 ORTHO05D004890 9.0e-47 190.7 160 59.4
TWI53G1349 Tripterygium wilfordii HOM05D004187 ORTHO05D004890 9.0e-47 190.7 165 55.8
CsaV3_3G013040 Cucumis sativus L. HOM05D004187 ORTHO05D004890 1.2e-46 190.3 160 61.2
MELO3C006513.2 Cucumis melo HOM05D004187 ORTHO05D004890 1.5e-46 189.9 160 60.6
Ca_24413_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 2.0e-46 189.5 123 68.3
Atru.chr4.2392 Acer truncatum HOM05D004187 ORTHO05D004890 3.4e-46 188.7 128 64.1
Atru.chr4.2417 Acer truncatum HOM05D004187 ORTHO05D004890 4.5e-46 188.3 162 54.9
CANSAT78G1519 Cannabis sativa HOM05D004187 ORTHO05D004890 5.9e-46 188.0 153 57.5
Medtr5g006610 Medicago truncatula HOM05D004187 ORTHO05D004890 5.9e-46 188.0 161 58.4
Phvul.002G043400 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 5.9e-46 188.0 121 68.6
Sed0012407 Sechium edule HOM05D004187 ORTHO05D004890 5.9e-46 188.0 160 59.4
Actinidia40129 Actinidia chinensis HOM05D004187 ORTHO05D004890 7.7e-46 187.6 155 54.8
TPR.G37887 Trifolium pratense HOM05D004187 ORTHO05D004890 7.7e-46 187.6 120 67.5
SalBow2G2347 Salvia bowleyana HOM05D004187 ORTHO05D004890 1.0e-45 187.2 153 58.2
arahy.Tifrunner.gnm1.ann1.Q4QH0F Arachis hypogaea HOM05D004187 ORTHO05D004890 1.3e-45 186.8 155 58.1
Psat2g190440 Pisum sativum HOM05D004187 ORTHO05D004890 1.7e-45 186.4 120 68.3
SalBow2G0844 Salvia bowleyana HOM05D004187 ORTHO05D004890 1.7e-45 186.4 153 58.2
arahy.Tifrunner.gnm1.ann1.8FXP11 Arachis hypogaea HOM05D004187 ORTHO05D004890 2.2e-45 186.0 160 56.9
vmacro15360 Vaccinium macrocarpon HOM05D004187 ORTHO05D004890 2.2e-45 186.0 146 56.8
LjContig00408g0013113 Lotus japonicus HOM05D004187 ORTHO05D004890 3.8e-45 185.3 142 60.6
arahy.Tifrunner.gnm1.ann1.Q6C7EF Arachis hypogaea HOM05D004187 ORTHO05D004890 6.5e-45 184.5 153 58.2
COL.COLO4_21526 Corchorus olitorius HOM05D004187 ORTHO05D004890 1.1e-44 183.7 113 71.7
Glyma.01G235900 Glycine max HOM05D004187 ORTHO05D004890 1.1e-44 183.7 150 56.0
Medtr5g006600 Medicago truncatula HOM05D004187 ORTHO05D004890 1.1e-44 183.7 120 64.2
arahy.Tifrunner.gnm1.ann1.LSRC2Y Arachis hypogaea HOM05D004187 ORTHO05D004890 1.4e-44 183.3 155 57.4
TPR.G37866 Trifolium pratense HOM05D004187 ORTHO05D004890 1.4e-44 183.3 157 54.8
Aqoxy2G03437 Aquilegia oxysepala HOM05D004187 ORTHO05D004890 3.2e-44 182.2 131 60.3
Ca_24412_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 3.2e-44 182.2 134 60.4
Ca_30960_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 3.2e-44 182.2 134 60.4
Manes.15G031200 Manihot esculenta HOM05D004187 ORTHO05D004890 4.2e-44 181.8 161 54.7
FAN08G0419 Fragaria x ananassa HOM05D004187 ORTHO05D004890 9.4e-44 180.6 119 64.7
Manes.03G175300 Manihot esculenta HOM05D004187 ORTHO05D004890 1.6e-43 179.9 158 55.1
PGR129G0008 Punica granatum HOM05D004187 ORTHO05D004890 2.7e-43 179.1 159 55.3
PGR142G1722 Punica granatum HOM05D004187 ORTHO05D004890 2.7e-43 179.1 159 55.3
Nitab4.5_0000050g0260 Nicotiana tabacum HOM05D004187 ORTHO05D004890 3.6e-43 178.7 161 55.3
Psat2g190480 Pisum sativum HOM05D004187 ORTHO05D004890 4.6e-43 178.3 120 64.2
CSS0045006 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 6.1e-43 177.9 133 57.9
Lj3A731T58 Lonicera japonica HOM05D004187 ORTHO05D004890 7.9e-43 177.6 153 54.2
MSTRG.4047 Avicennia marina HOM05D004187 ORTHO05D004890 1.0e-42 177.2 153 56.2
AUR62001090 Chenopodium quinoa HOM05D004187 ORTHO05D004890 1.8e-42 176.4 158 53.2
GSVIVG01018017001 Vitis vinifera HOM05D004187 ORTHO05D004890 2.3e-42 176.0 160 52.5
Hma1.2p1_0207F.1_g088010 Hydrangea macrophylla HOM05D004187 ORTHO05D004890 3.9e-42 175.3 157 52.2
Nitab4.5_0001792g0010 Nicotiana tabacum HOM05D004187 ORTHO05D004890 3.9e-42 175.3 117 65.8
Glyma.11G007300 Glycine max HOM05D004187 ORTHO05D004890 6.7e-42 174.5 114 64.9
Sopen10g014270 Solanum pennellii HOM05D004187 ORTHO05D004890 8.8e-42 174.1 161 55.3
TAR633G0827 Trochodendron aralioides HOM05D004187 ORTHO05D004890 8.8e-42 174.1 126 59.5
CSS0034976 Camellia sinensis var. sinensis HOM05D004187 ORTHO05D004890 2.0e-41 172.9 152 51.3
PGSC0003DMG401028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 7.4e-41 171.0 161 55.3
Sc19g0004030 Simmondsia chinensis HOM05D004187 ORTHO05D004890 9.7e-41 170.6 162 51.9
CDE07G0031 Ceratophyllum demersum HOM05D004187 ORTHO05D004890 4.8e-40 168.3 152 53.3
HPP92_009615 Vanilla planifolia HOM05D004187 ORTHO05D004890 8.2e-40 167.5 150 54.7
AUR62008916 Chenopodium quinoa HOM05D004187 ORTHO05D004890 1.4e-39 166.8 158 51.9
ECA247G0434 Erigeron canadensis HOM05D000045 ORTHO05D004890 4.1e-39 165.2 168 48.2
PGSC0003DMG402028774 Solanum tuberosum HOM05D004187 ORTHO05D004890 9.1e-39 164.1 117 65.8
DCAR_031726 Daucus carota HOM05D004187 ORTHO05D004890 2.0e-38 162.9 153 50.3
ECA233G0410 Erigeron canadensis HOM05D004187 ORTHO05D004890 4.5e-38 161.8 128 55.5
Solyc10g045190.3 Solanum lycopersicum HOM05D004187 ORTHO05D004890 5.9e-38 161.4 117 65.0
PGSC0003DMG400039476 Solanum tuberosum HOM05D004187 ORTHO05D004890 7.7e-38 161.0 117 61.5
Cc10_g08560 Coffea canephora HOM05D004187 ORTHO05D004890 1.0e-37 160.6 171 49.1
ECA247G1582 Erigeron canadensis HOM05D004187 ORTHO05D004890 1.0e-37 160.6 128 54.7
Rhsim03G0003800 Rhododendron simsii HOM05D004187 ORTHO05D004890 1.0e-37 160.6 162 48.8
HanXRQChr08g0219391 Helianthus annuus HOM05D004187 ORTHO05D004890 1.7e-37 159.8 128 54.7
Migut.G00365 Erythranthe guttata HOM05D004187 ORTHO05D004890 3.8e-37 158.7 126 55.6
Nitab4.5_0000085g0360 Nicotiana tabacum HOM05D004187 ORTHO05D004890 1.1e-36 157.1 158 48.7
SGA_v2.0_scaffold191G40487 Striga asiatica HOM05D004187 ORTHO05D004890 1.1e-36 157.1 123 57.7
Actinidia32414 Actinidia chinensis HOM05D004187 ORTHO05D004890 1.4e-36 156.8 122 55.7
Dinv03045 Davidia involucrata HOM05D004187 ORTHO05D004890 1.9e-36 156.4 124 54.0
Nitab4.5_0001547g0030 Nicotiana tabacum HOM05D004187 ORTHO05D004890 2.5e-36 156.0 158 48.7
PSO210G5857 Papaver somniferum HOM05D004187 ORTHO05D004890 3.2e-36 155.6 159 47.2
PSO170G4884 Papaver somniferum HOM05D004187 ORTHO05D004890 5.5e-36 154.8 159 47.2
ATR0665G390 Amborella trichopoda HOM05D004187 ORTHO05D004890 9.4e-36 154.1 152 48.7
Peaxi162Scf00092g00016 Petunia axillaris HOM05D004187 ORTHO05D004890 7.9e-35 151.0 128 53.9
Solyc09g082480.2 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.0e-34 150.6 127 52.0
Sopen09g031340 Solanum pennellii HOM05D004187 ORTHO05D004890 1.4e-34 150.2 127 52.0
Lsat_1_v5_gn_8_21341 Lactuca sativa HOM05D004187 ORTHO05D004890 3.9e-34 148.7 128 50.8
PGSC0003DMG400040737 Solanum tuberosum HOM05D004187 ORTHO05D004890 5.1e-34 148.3 112 59.8
Peaxi162Scf00245g00106 Petunia axillaris HOM05D004187 ORTHO05D004890 6.7e-34 147.9 120 55.0
CAN.G1402.3 Capsicum annuum HOM05D004187 ORTHO05D004890 4.4e-33 145.2 123 52.0
unitig_22.g6822 Utricularia gibba HOM05D004187 ORTHO05D004890 2.2e-32 142.9 151 43.7
AUR62001087 Chenopodium quinoa HOM05D004187 ORTHO05D004890 9.1e-31 137.5 92 63.0
PGSC0003DMG400039782 Solanum tuberosum HOM05D004187 ORTHO05D004890 2.0e-30 136.3 103 59.2
Cfa001472 Carpinus fangiana HOM05D004187 ORTHO05D004890 3.5e-30 135.6 127 51.2
Prupe.2G235500 Prunus persica HOM05D004187 ORTHO05D004890 4.5e-30 135.2 126 47.6
Potri.008G076500 Populus trichocarpa HOM05D004187 ORTHO05D004890 5.9e-30 134.8 128 50.0
QL08p059729 Quercus lobata HOM05D004187 ORTHO05D004890 1.7e-29 133.3 123 44.7
Haze_17068 Corylus avellana HOM05D004187 ORTHO05D004890 1.1e-28 130.6 160 43.8
RcHm_v2.0_Chr1g0367131 Rosa chinensis HOM05D004187 ORTHO05D004890 1.5e-28 130.2 122 48.4
Sopen09g031300 Solanum pennellii HOM05D004187 ORTHO05D004890 1.9e-28 129.8 114 50.0
Atru.chr1.2916 Acer truncatum HOM05D004187 ORTHO05D004890 2.0e-25 119.8 113 46.9
Nn6g35138 Nelumbo nucifera HOM05D004187 ORTHO05D004890 3.3e-25 119.0 109 51.4
Atru.chr7.913 Acer truncatum HOM05D004187 ORTHO05D004890 5.7e-25 118.2 114 45.6
Manes.12G002301 Manihot esculenta HOM05D004187 ORTHO05D004890 1.3e-24 117.1 110 50.9
COL.COLO4_15044 Corchorus olitorius HOM05D004187 ORTHO05D004890 1.7e-24 116.7 123 46.3
Sopen09g031290 Solanum pennellii HOM05D004187 ORTHO05D004890 1.1e-23 114.0 102 49.0
Lj1g0009372 Lotus japonicus HOM05D004187 ORTHO05D004890 3.1e-23 112.5 126 42.9
Lj1g0019332 Lotus japonicus HOM05D004187 ORTHO05D004890 3.1e-23 112.5 126 42.9
Atru.chr1.2920 Acer truncatum HOM05D004187 ORTHO05D004890 7.0e-23 111.3 114 45.6
Duzib114G0324 Durio zibethinus HOM05D004187 ORTHO05D004890 1.6e-22 110.2 112 46.4
VMungo1383G1788 Vigna mungo HOM05D004187 ORTHO05D004890 2.0e-22 109.8 131 40.5
Lalb_Chr10g0091621 Lupinus albus HOM05D004187 ORTHO05D004890 3.5e-22 109.0 118 42.4
BcaB03g14654 Brassica carinata HOM05D004187 ORTHO05D004890 4.5e-22 108.6 76 69.7
Solyc09g082420.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 7.7e-22 107.8 89 52.8
Solyc09g082430.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.7e-21 106.7 96 51.0
PGSC0003DMG400032269 Solanum tuberosum HOM05D004187 ORTHO05D004890 2.9e-21 105.9 84 54.8
Phvul.008G010500 Phaseolus vulgaris HOM05D004187 ORTHO05D004890 3.8e-21 105.5 119 41.2
Ca_12246_v3 Cicer arietinum L. HOM05D004187 ORTHO05D004890 8.5e-21 104.4 107 43.9
Lj1g0011366 Lotus japonicus HOM05D004187 ORTHO05D004890 5.5e-20 101.7 125 39.2
Medtr5g006580 Medicago truncatula HOM05D004187 ORTHO05D004890 9.4e-20 100.9 121 43.8
PGSC0003DMG400013771 Solanum tuberosum HOM05D004187 ORTHO05D004890 1.5e-17 93.6 84 51.2
Solyc09g082440.1 Solanum lycopersicum HOM05D004187 ORTHO05D004890 1.7e-16 90.1 73 53.4
Lalb_Chr16g0376451 Lupinus albus HOM05D004187 ORTHO05D004890 3.7e-16 89.0 74 58.1
PGSC0003DMG400032265 Solanum tuberosum HOM05D004187 ORTHO05D004890 2.2e-13 79.7 68 50.0
Sabra10G0059200 Salix brachista HOM05D004187 ORTHO05D004890 4.2e-12 75.5 65 50.8
Thecc.10G042200 Theobroma cacao HOM05D009017 ORTHO05D010462 4.2e-12 75.5 126 33.3
Gohir.A10G219300 Gossypium hirsutum HOM05D009017 ORTHO05D010462 3.4e-09 65.9 120 32.5
Zm00001eb275620 Zea mays HOM05D004187 ORTHO05D004890 5.7e-09 65.1 57 57.9
Potri.010G083751 Populus trichocarpa HOM05D004187 ORTHO05D004890 2.8e-08 62.8 42 57.1


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