Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g00499 Brassica carinata HOM05D002338 ORTHO05D006102 1.9e-209 732.3 367 100.0
BcaB03g12416 Brassica carinata HOM05D002338 ORTHO05D006102 1.6e-115 420.2 358 65.6
C03p80710 Brassica napus HOM05D002338 ORTHO05D006102 1.3e-114 417.2 359 67.4
BraA01t00291Z Brassica rapa HOM05D002338 ORTHO05D006102 2.3e-98 363.2 360 56.9
A01p03070 Brassica napus HOM05D002338 ORTHO05D006102 6.7e-98 361.7 358 56.4
BcaNung00583 Brassica carinata HOM05D002338 ORTHO05D006102 2.0e-97 360.1 359 56.8
C01p03420 Brassica napus HOM05D002338 ORTHO05D006102 2.0e-97 360.1 359 56.8
BolC1t00329H Brassica oleracea HOM05D002338 ORTHO05D006102 2.0e-97 360.1 359 56.8
Sp7g33320 Schrenkiella parvula HOM05D002338 ORTHO05D006102 1.0e-93 347.8 417 49.2
Thhalv10027569m.g Eutrema salsugineum HOM05D002338 ORTHO05D006102 2.0e-89 333.6 407 50.6
AT4G35540 Arabidopsis thaliana HOM05D002338 ORTHO05D006102 1.6e-86 323.9 385 49.1
CARHR243880 Cardamine hirsuta HOM05D002338 ORTHO05D006102 2.0e-86 323.6 424 47.6
AL7G15620 Arabidopsis lyrata HOM05D002338 ORTHO05D006102 9.4e-84 314.7 443 44.7
Aa31LG6G12510 Aethionema arabicum HOM05D002338 ORTHO05D006102 2.8e-80 303.1 378 46.6
THA.LOC104827541 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 4.0e-66 256.1 431 40.6
THA.LOC104826474 Tarenaya hassleriana HOM05D002338 ORTHO05D006102 2.0e-65 253.8 430 40.7
Cpa.g.sc7.51 Carica papaya HOM05D002338 ORTHO05D006102 8.3e-56 221.9 381 36.7
AUR62031197 Chenopodium quinoa HOM05D002338 ORTHO05D006102 6.2e-51 205.7 380 34.5
BcaNung03637 Brassica carinata HOM05D002338 ORTHO05D006102 1.8e-50 204.1 214 55.1
AUR62027671 Chenopodium quinoa HOM05D002338 ORTHO05D006102 2.0e-49 200.7 380 33.7
Ciclev10031207m.g Citrus clementina HOM05D002338 ORTHO05D006102 2.0e-49 200.7 387 34.4
Duzib138G0048 Durio zibethinus HOM05D002338 ORTHO05D006102 2.0e-49 200.7 380 34.2
Manes.06G033800 Manihot esculenta HOM05D002338 ORTHO05D006102 2.0e-49 200.7 385 34.8
AUR62036936 Chenopodium quinoa HOM05D002338 ORTHO05D006102 5.8e-49 199.1 380 33.7
COL.COLO4_08893 Corchorus olitorius HOM05D002338 ORTHO05D006102 6.4e-48 195.7 383 34.5
Hma1.2p1_0987F.1_g244570 Hydrangea macrophylla HOM05D002338 ORTHO05D006102 3.2e-47 193.4 390 31.0
Thecc.01G169900 Theobroma cacao HOM05D002338 ORTHO05D006102 4.1e-47 193.0 326 35.9
arahy.Tifrunner.gnm1.ann1.2YH6BX Arachis hypogaea HOM05D002338 ORTHO05D006706 7.8e-46 188.7 426 31.2
Medtr2g031410 Medicago truncatula HOM05D002338 ORTHO05D006102 7.8e-46 188.7 390 30.8
Sabra04G0055900 Salix brachista HOM05D002338 ORTHO05D006102 7.8e-46 188.7 388 32.5
GSVIVG01021206001 Vitis vinifera HOM05D002338 ORTHO05D006102 7.8e-46 188.7 413 31.2
VMungo1215G0129 Vigna mungo HOM05D002338 ORTHO05D006102 1.3e-45 188.0 392 32.1
Glyma.01G042900 Glycine max HOM05D002338 ORTHO05D006102 3.9e-45 186.4 393 30.3
CSS0032914 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 5.0e-45 186.0 387 32.0
Lalb_Chr18g0054471 Lupinus albus HOM05D002338 ORTHO05D006102 5.0e-45 186.0 426 30.5
CiPaw.10G058500 Carya illinoinensis HOM05D002338 ORTHO05D006102 8.6e-45 185.3 388 32.5
Atru.chr2.3891 Acer truncatum HOM05D002338 ORTHO05D006102 1.1e-44 184.9 374 33.4
Prupe.4G060500 Prunus persica HOM05D002338 ORTHO05D006102 1.1e-44 184.9 398 30.9
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.5e-44 184.5 388 32.0
Haze_06238 Corylus avellana HOM05D002338 ORTHO05D006102 1.9e-44 184.1 424 31.6
CSS0007657 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 2.5e-44 183.7 387 31.8
Ca_00873_v3 Cicer arietinum L. HOM05D002338 ORTHO05D006102 4.3e-44 183.0 425 30.1
TPR.G22268 Trifolium pratense HOM05D002338 ORTHO05D006102 7.3e-44 182.2 425 29.9
Cc02_g14860 Coffea canephora HOM05D002338 ORTHO05D006102 9.5e-44 181.8 380 31.1
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 9.5e-44 181.8 379 32.2
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 9.5e-44 181.8 379 32.2
Gohir.D11G163900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 9.5e-44 181.8 380 31.6
Gorai.007G174700 Gossypium raimondii HOM05D002338 ORTHO05D006102 1.2e-43 181.4 380 31.3
Rhsim09G0087800 Rhododendron simsii HOM05D002338 ORTHO05D006102 1.6e-43 181.0 387 31.0
TWI38G1256 Tripterygium wilfordii HOM05D002338 ORTHO05D006102 2.8e-43 180.3 326 33.7
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 3.6e-43 179.9 384 31.8
MD05G1301900 Malus domestica HOM05D002338 ORTHO05D006102 3.6e-43 179.9 396 31.1
Phvul.002G066000 Phaseolus vulgaris HOM05D002338 ORTHO05D006102 3.6e-43 179.9 392 30.9
EL10Ac8g20603 Beta vulgaris HOM05D002338 ORTHO05D006102 4.7e-43 179.5 378 32.0
FvH4_6g24910 Fragaria vesca HOM05D002338 ORTHO05D006102 4.7e-43 179.5 384 31.8
Rhsim13G0190300 Rhododendron simsii HOM05D002338 ORTHO05D006102 6.2e-43 179.1 387 30.5
Dinv32217 Davidia involucrata HOM05D002338 ORTHO05D006102 8.1e-43 178.7 381 31.0
FAN05G5039 Fragaria x ananassa HOM05D002338 ORTHO05D006102 8.1e-43 178.7 384 31.8
Ah.09g233540 Amaranthus hybridus HOM05D002338 ORTHO05D006102 1.1e-42 178.3 380 31.1
Gohir.A11G156900 Gossypium hirsutum HOM05D002338 ORTHO05D006102 1.1e-42 178.3 361 31.9
Cfa000603 Carpinus fangiana HOM05D002338 ORTHO05D006102 1.4e-42 177.9 423 31.0
SHI24483 Sapria himalayana HOM05D002338 ORTHO05D006102 1.8e-42 177.6 389 32.9
QL05p046957 Quercus lobata HOM05D002338 ORTHO05D006102 6.8e-42 175.6 423 29.8
RcHm_v2.0_Chr5g0010711 Rosa chinensis HOM05D002338 ORTHO05D006102 6.8e-42 175.6 384 30.7
Sed0024643 Sechium edule HOM05D002338 ORTHO05D006102 6.8e-42 175.6 387 31.3
SGA_v2.0_scaffold1G00039 Striga asiatica HOM05D002338 ORTHO05D006102 5.8e-41 172.6 419 30.8
Potri.004G084700 Populus trichocarpa HOM05D002338 ORTHO05D006102 9.9e-41 171.8 384 32.3
ClCG03G007760 Citrullus lanatus HOM05D002338 ORTHO05D006102 1.7e-40 171.0 421 29.5
MSTRG.7403 Avicennia marina HOM05D002338 ORTHO05D006102 2.2e-40 170.6 386 30.6
Migut.H00865 Erythranthe guttata HOM05D002338 ORTHO05D006102 2.9e-40 170.2 372 30.6
TAR698G0001 Trochodendron aralioides HOM05D002338 ORTHO05D006102 2.9e-40 170.2 393 28.2
CsaV3_1G033380 Cucumis sativus L. HOM05D002338 ORTHO05D006102 3.7e-40 169.9 421 29.2
Peaxi162Scf00753g00411 Petunia axillaris HOM05D002338 ORTHO05D006102 4.9e-40 169.5 380 31.1
Lj6g0008317 Lotus japonicus HOM05D002338 ORTHO05D006102 1.1e-39 168.3 424 28.8
Oeu030709.1 Olea europaea HOM05D002338 ORTHO05D006102 1.9e-39 167.5 381 30.7
SalBow4G0953 Salvia bowleyana HOM05D002338 ORTHO05D006102 1.9e-39 167.5 385 30.4
CAN.G943.27 Capsicum annuum HOM05D002338 ORTHO05D006102 2.4e-39 167.2 401 30.2
PGR004G1505 Punica granatum HOM05D002338 ORTHO05D006102 3.2e-39 166.8 384 28.6
MELO3C002646.2 Cucumis melo HOM05D002338 ORTHO05D006102 4.1e-39 166.4 421 28.0
Sopen03g002200 Solanum pennellii HOM05D002338 ORTHO05D006102 7.1e-39 165.6 411 29.4
ECA247G1464 Erigeron canadensis HOM05D002338 ORTHO05D006102 1.6e-38 164.5 328 34.5
Lj1P636T28 Lonicera japonica HOM05D002338 ORTHO05D006102 3.5e-38 163.3 419 29.4
PGSC0003DMG400004381 Solanum tuberosum HOM05D002338 ORTHO05D006102 3.5e-38 163.3 411 29.4
HanXRQChr16g0518871 Helianthus annuus HOM05D002338 ORTHO05D006102 7.8e-38 162.2 310 34.2
HanXRQChr16g0520661 Helianthus annuus HOM05D002338 ORTHO05D006102 1.3e-37 161.4 310 34.8
Nn1g04395 Nelumbo nucifera HOM05D002338 ORTHO05D006102 1.3e-37 161.4 404 28.7
DCAR_005225 Daucus carota HOM05D002338 ORTHO05D006102 1.7e-37 161.0 412 28.6
Nn3g21334 Nelumbo nucifera HOM05D002338 ORTHO05D006102 3.9e-37 159.8 313 31.3
Nitab4.5_0007975g0050 Nicotiana tabacum HOM05D002338 ORTHO05D006102 3.9e-37 159.8 290 35.5
BolC3t20315H Brassica oleracea HOM05D002338 ORTHO05D006102 5.1e-37 159.5 278 45.3
unitig_736.g22955 Utricularia gibba HOM05D002338 ORTHO05D006102 8.6e-37 158.7 378 29.9
GSVIVG01026940001 Vitis vinifera HOM05D002338 ORTHO05D006102 8.6e-37 158.7 417 29.3
PSO675G9291 Papaver somniferum HOM05D002338 ORTHO05D006102 1.9e-36 157.5 360 28.3
CSS0032678 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 7.3e-36 155.6 431 27.4
PSO541G5199 Papaver somniferum HOM05D002338 ORTHO05D006102 7.3e-36 155.6 360 28.1
DCAR_030917 Daucus carota HOM05D002338 ORTHO05D006102 9.5e-36 155.2 323 31.6
Nitab4.5_0002076g0140 Nicotiana tabacum HOM05D002338 ORTHO05D006102 1.8e-34 151.0 290 33.8
Lsat_1_v5_gn_4_49520 Lactuca sativa HOM05D002338 ORTHO05D006102 6.8e-34 149.1 328 30.8
CANSAT54G0294 Cannabis sativa HOM05D002338 ORTHO05D006102 1.5e-33 147.9 371 29.6
Migut.M01042 Erythranthe guttata HOM05D002338 ORTHO05D006102 1.5e-33 147.9 348 30.5
MBI18_g09632_MAGBIO Magnolia biondii HOM05D002338 ORTHO05D006102 7.6e-33 145.6 356 28.9
CSS0015305 Camellia sinensis var. sinensis HOM05D002338 ORTHO05D006102 2.4e-31 140.6 386 27.7
Aqoxy1G02082 Aquilegia oxysepala HOM05D002338 ORTHO05D006102 3.2e-31 140.2 337 30.0
Glyma.04G157100 Glycine max HOM05D002338 ORTHO05D006102 7.1e-31 139.0 349 29.8
Atru.chr10.1675 Acer truncatum HOM05D002338 ORTHO05D006102 1.6e-30 137.9 248 33.5
BcaNung03635 Brassica carinata HOM05D002338 ORTHO05D006102 1.0e-29 135.2 177 47.5
HanXRQChr16g0518151 Helianthus annuus HOM05D002338 ORTHO05D006102 3.0e-29 133.7 283 32.9
HPP92_006302 Vanilla planifolia HOM05D002338 ORTHO05D006102 2.6e-25 120.6 311 29.6
HanXRQChr16g0517751 Helianthus annuus HOM05D002338 ORTHO05D006102 9.9e-25 118.6 257 30.4
CDE02G4213 Ceratophyllum demersum HOM05D002338 ORTHO05D006102 1.3e-24 118.2 429 23.8
FAN16G2383 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.7e-24 117.9 273 30.4
Solyc03g006177.2 Solanum lycopersicum HOM05D002338 ORTHO05D006102 4.9e-24 116.3 232 32.8
Lj2A298G34 Lonicera japonica HOM05D002338 ORTHO05D006102 8.4e-24 115.5 226 32.7
SEGI_17381 Sequoiadendron giganteum HOM05D002338 ORTHO05D006102 2.1e-22 110.9 234 29.1
Oeu017495.1 Olea europaea HOM05D002338 ORTHO05D006102 4.6e-22 109.8 297 30.3
ATR0794G026 Amborella trichopoda HOM05D002338 ORTHO05D006102 6.6e-21 105.9 269 29.7
TAR627G0524 Trochodendron aralioides HOM05D002338 ORTHO05D006102 4.3e-20 103.2 172 32.6
Sc05g0007130 Simmondsia chinensis HOM05D002338 ORTHO05D006102 4.5e-17 93.2 273 28.6
Pp3c3_11130 Physcomitrium patens HOM05D002338 ORTHO05D006102 3.2e-15 87.0 188 28.7
Zm00001eb175250 Zea mays HOM05D002338 ORTHO05D006102 4.6e-14 83.2 210 31.4
Psat1g166240 Pisum sativum HOM05D002338 ORTHO05D006102 1.1e-12 78.6 189 26.5
Mapoly0022s0109 Marchantia polymorpha HOM05D002338 ORTHO05D006102 5.6e-12 76.3 204 26.0
BolC3t20316H Brassica oleracea HOM05D002338 ORTHO05D006102 2.8e-11 73.9 39 94.9
AagrBONN_evm.TU.Sc2ySwM_228.3636 Anthoceros agrestis HOM05D002338 ORTHO05D006102 3.8e-08 63.5 197 24.4


User provided reference genes

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