Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB08g36932 Brassica carinata HOM05D000629 ORTHO05D094041 3.4e-36 154.5 77 100.0
C03p07890 Brassica napus HOM05D000629 ORTHO05D000576 5.9e-12 73.9 80 61.2
A03p06900 Brassica napus HOM05D000629 ORTHO05D000576 7.7e-12 73.6 80 58.8
BolC3t13287H Brassica oleracea HOM05D000629 ORTHO05D000576 1.7e-11 72.4 80 61.2
BraA03t10012Z Brassica rapa HOM05D000629 ORTHO05D000576 2.9e-11 71.6 80 58.8
CARHR198290 Cardamine hirsuta HOM05D000629 ORTHO05D000576 1.4e-10 69.3 90 53.3
AT5G15020 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 3.2e-10 68.2 85 54.1
A02p02840 Brassica napus HOM05D000629 ORTHO05D000576 4.2e-10 67.8 92 53.3
BraA02t05257Z Brassica rapa HOM05D000629 ORTHO05D000576 4.2e-10 67.8 92 53.3
Sp6g29020 Schrenkiella parvula HOM05D000629 ORTHO05D000576 9.4e-10 66.6 88 51.1
C02p07460 Brassica napus HOM05D000629 ORTHO05D000576 1.6e-09 65.9 91 52.7
BolC2t06677H Brassica oleracea HOM05D000629 ORTHO05D000576 1.6e-09 65.9 91 52.7
Carub.0006s1318 Capsella rubella HOM05D000629 ORTHO05D000576 1.6e-09 65.9 89 51.7
AT3G01320 Arabidopsis thaliana HOM05D000629 ORTHO05D000576 1.4e-08 62.8 88 50.0
Sp3g00760 Schrenkiella parvula HOM05D000629 ORTHO05D000576 1.8e-08 62.4 95 48.4
AL3G10910 Arabidopsis lyrata HOM05D000629 ORTHO05D000576 8.8e-08 60.1 85 49.4
CARHR075690 Cardamine hirsuta HOM05D000629 ORTHO05D000576 2.6e-07 58.5 91 48.4
CiPaw.04G021700 Carya illinoinensis HOM05D000629 ORTHO05D000576 2.6e-07 58.5 84 42.9
Thhalv10019899m.g Eutrema salsugineum HOM05D000629 ORTHO05D000576 2.6e-07 58.5 93 43.0
Aa31LG11G14500 Aethionema arabicum HOM05D000629 ORTHO05D000576 3.3e-07 58.2 96 43.8
Carub.0003s0081 Capsella rubella HOM05D000629 ORTHO05D000576 3.3e-07 58.2 93 47.3
Gorai.008G060800 Gossypium raimondii HOM05D000629 ORTHO05D000576 5.7e-07 57.4 90 43.3
THA.LOC104821055 Tarenaya hassleriana HOM05D000629 ORTHO05D000576 5.7e-07 57.4 89 46.1
Eucgr.J02161 Eucalyptus grandis HOM05D000629 ORTHO05D000576 7.4e-07 57.0 87 43.7
TWI36G1084 Tripterygium wilfordii HOM05D000629 ORTHO05D000576 9.7e-07 56.6 83 44.6
Gohir.D12G057700 Gossypium hirsutum HOM05D000629 ORTHO05D000576 1.3e-06 56.2 90 43.3
Thecc.02G238600 Theobroma cacao HOM05D000629 ORTHO05D000576 1.7e-06 55.8 76 46.1
Eucgr.I01884 Eucalyptus grandis HOM05D000629 ORTHO05D000576 2.8e-06 55.1 89 40.4
Gohir.D02G167400 Gossypium hirsutum HOM05D000629 ORTHO05D000576 3.7e-06 54.7 76 44.7
Duzib248G1530 Durio zibethinus HOM05D000629 ORTHO05D000576 4.8e-06 54.3 84 44.0
Lalb_Chr21g0319171 Lupinus albus HOM05D000629 ORTHO05D000576 4.8e-06 54.3 91 40.7
AUR62014568 Chenopodium quinoa HOM05D000629 ORTHO05D000576 6.3e-06 53.9 79 48.1
AUR62039393 Chenopodium quinoa HOM05D000629 ORTHO05D000576 6.3e-06 53.9 79 48.1
BcaB04g20237 Brassica carinata HOM05D000629 ORTHO05D000576 8.2e-06 53.5 76 42.1
Glyma.08G292900 Glycine max HOM05D000629 ORTHO05D000576 8.2e-06 53.5 79 45.6
Gohir.A03G144200 Gossypium hirsutum HOM05D000629 ORTHO05D000576 8.2e-06 53.5 80 43.8
Sc11g0008010 Simmondsia chinensis HOM05D000629 ORTHO05D000576 8.2e-06 53.5 76 48.7


User provided reference genes

Program Settings