Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB07g31761 Brassica carinata HOM05D000706 ORTHO05D001633 1.7e-134 482.6 236 100.0
A09p11010 Brassica napus HOM05D000706 ORTHO05D001633 1.0e-94 350.5 267 72.3
Sp3g29760 Schrenkiella parvula HOM05D000706 ORTHO05D001633 8.2e-89 330.9 265 69.1
BraA09t36741Z Brassica rapa HOM05D000706 ORTHO05D001633 2.8e-81 305.8 266 65.4
BcaC04g23016 Brassica carinata HOM05D000706 ORTHO05D001633 7.7e-79 297.7 266 64.7
BolC9t54195H Brassica oleracea HOM05D000706 ORTHO05D001633 1.8e-75 286.6 266 62.4
BcaB07g31769 Brassica carinata HOM05D000706 ORTHO05D001633 3.7e-73 278.9 263 62.7
BcaB07g31767 Brassica carinata HOM05D000706 ORTHO05D001633 1.1e-66 257.3 126 98.4
Thhalv10001877m.g Eutrema salsugineum HOM05D000706 ORTHO05D001633 2.4e-64 249.6 267 57.3
Thhalv10016136m.g Eutrema salsugineum HOM05D000706 ORTHO05D001633 2.1e-60 236.5 264 54.9
C09p13020 Brassica napus HOM05D000706 ORTHO05D001633 5.9e-55 218.4 266 52.3
Carub.0003s3025 Capsella rubella HOM05D000706 ORTHO05D001633 1.0e-46 191.0 269 49.1
CARHR106710 Cardamine hirsuta HOM05D000706 ORTHO05D001633 1.1e-45 187.6 281 46.6
AT2G16485 Arabidopsis thaliana HOM05D000706 ORTHO05D001633 8.3e-41 171.4 270 47.4
AL3G52680 Arabidopsis lyrata HOM05D000706 ORTHO05D001633 1.3e-33 147.5 289 42.2
BcaB03g16364 Brassica carinata HOM05D000706 ORTHO05D001633 7.8e-31 138.3 108 69.4
Aa31LG8G13810 Aethionema arabicum HOM05D000706 ORTHO05D001633 3.7e-17 92.8 229 34.5
Duzib132G0594 Durio zibethinus HOM05D000706 ORTHO05D001633 4.6e-15 85.9 275 35.3
Ciclev10027673m.g Citrus clementina HOM05D000706 ORTHO05D001633 1.1e-11 74.7 287 30.7
Duzib052G0725 Durio zibethinus HOM05D000706 ORTHO05D001633 1.5e-10 70.9 257 32.7
Potri.004G161700 Populus trichocarpa HOM05D000706 ORTHO05D001633 1.3e-09 67.8 303 30.7
COL.COLO4_26035 Corchorus olitorius HOM05D000706 ORTHO05D001633 1.7e-09 67.4 300 32.3
Cpa.g.c41117 Carica papaya HOM05D000706 ORTHO05D001633 2.2e-09 67.0 103 44.7
Cpa.g.c46116 Carica papaya HOM05D000706 ORTHO05D001633 2.2e-09 67.0 103 44.7
ClCG02G004620 Citrullus lanatus HOM05D000706 ORTHO05D001633 2.2e-09 67.0 278 30.6
Cfa010509 Carpinus fangiana HOM05D000706 ORTHO05D001633 3.7e-09 66.2 254 32.7
Gohir.D02G220300 Gossypium hirsutum HOM05D000706 ORTHO05D001633 8.4e-09 65.1 282 31.6
Hund06279 Selenicereus undatus HOM05D000706 ORTHO05D001633 1.1e-08 64.7 227 32.2
Gohir.A03G198900 Gossypium hirsutum HOM05D000706 ORTHO05D001633 1.9e-08 63.9 288 29.9
Thecc.02G076000 Theobroma cacao HOM05D000706 ORTHO05D001633 1.2e-07 61.2 294 30.3
Gorai.005G248200 Gossypium raimondii HOM05D000706 ORTHO05D001633 1.6e-07 60.8 282 30.9
RcHm_v2.0_Chr6g0267521 Rosa chinensis HOM05D000706 ORTHO05D001633 4.6e-07 59.3 284 30.3
MD00G1040500 Malus domestica HOM05D000706 ORTHO05D001633 1.7e-06 57.4 257 31.9
Duzib248G0445 Durio zibethinus HOM05D000706 ORTHO05D001633 3.9e-06 56.2 282 28.4
Sabra04G0108700 Salix brachista HOM05D000706 ORTHO05D001633 3.9e-06 56.2 304 28.9
Duzib187G0171 Durio zibethinus HOM05D000706 ORTHO05D001633 5.1e-06 55.8 186 32.3


User provided reference genes

Program Settings