Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g28829 Brassica carinata HOM05D004135 ORTHO05D005558 2.7e-166 588.6 294 100.0
BraA04t18166Z Brassica rapa HOM05D004135 ORTHO05D005558 3.1e-162 575.1 294 97.6
BcaC02g07752 Brassica carinata HOM05D004135 ORTHO05D005558 9.0e-162 573.5 294 97.3
C04p64030 Brassica napus HOM05D004135 ORTHO05D005558 1.2e-161 573.2 294 97.3
BolC4t27879H Brassica oleracea HOM05D004135 ORTHO05D005558 1.2e-161 573.2 294 97.3
A04p26610 Brassica napus HOM05D004135 ORTHO05D005558 1.5e-161 572.8 294 97.3
BcaC01g05751 Brassica carinata HOM05D004135 ORTHO05D005558 4.3e-156 554.7 294 93.5
C03p22580 Brassica napus HOM05D004135 ORTHO05D005558 4.3e-156 554.7 294 93.5
BolC3t14655H Brassica oleracea HOM05D004135 ORTHO05D005558 1.6e-155 552.7 294 93.2
BraA03t11189Z Brassica rapa HOM05D004135 ORTHO05D005558 2.1e-155 552.4 294 92.9
A03p19330 Brassica napus HOM05D004135 ORTHO05D005558 2.8e-155 552.0 294 93.2
Thhalv10017028m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 9.0e-154 547.0 291 93.8
Sp4g17120 Schrenkiella parvula HOM05D004135 ORTHO05D005558 9.0e-154 547.0 294 92.5
Aa31LG10G6460 Aethionema arabicum HOM05D004135 ORTHO05D005558 1.5e-153 546.2 294 92.2
AT2G34840 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 2.2e-152 542.3 294 91.5
THA.LOC104814339 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.4e-151 539.7 294 90.8
Carub.0004s1652 Capsella rubella HOM05D004135 ORTHO05D005558 2.1e-150 535.8 294 90.8
THA.LOC104798582 Tarenaya hassleriana HOM05D004135 ORTHO05D005558 1.8e-149 532.7 294 89.5
Aa31LG6G11870 Aethionema arabicum HOM05D004135 ORTHO05D005558 5.1e-149 531.2 294 89.8
Sp1g26530 Schrenkiella parvula HOM05D004135 ORTHO05D005558 1.5e-148 529.6 294 88.8
AL1G44690 Arabidopsis lyrata HOM05D004135 ORTHO05D005558 3.3e-148 528.5 294 89.5
Carub.0001s2889 Capsella rubella HOM05D004135 ORTHO05D005558 5.7e-148 527.7 294 89.5
Thhalv10008349m.g Eutrema salsugineum HOM05D004135 ORTHO05D005558 7.4e-148 527.3 294 88.1
AT1G30630 Arabidopsis thaliana HOM05D004135 ORTHO05D005558 1.6e-147 526.2 294 89.1
Cpa.g.sc285.5 Carica papaya HOM05D004135 ORTHO05D005558 2.4e-146 522.3 293 87.4
BcaB07g32703 Brassica carinata HOM05D004135 ORTHO05D005558 3.1e-146 521.9 294 87.1
BcaC05g27087 Brassica carinata HOM05D004135 ORTHO05D005558 5.3e-146 521.2 294 87.1
C05p29690 Brassica napus HOM05D004135 ORTHO05D005558 5.3e-146 521.2 294 87.1
BolC5t31698H Brassica oleracea HOM05D004135 ORTHO05D005558 5.3e-146 521.2 294 87.1
A09p35780 Brassica napus HOM05D004135 ORTHO05D005558 1.2e-145 520.0 294 86.7
BraA09t39101Z Brassica rapa HOM05D004135 ORTHO05D005558 1.2e-145 520.0 294 86.7
CARHR030110 Cardamine hirsuta HOM05D004135 ORTHO05D005558 2.0e-145 519.2 294 87.4
Potri.011G155800 Populus trichocarpa HOM05D004135 ORTHO05D005558 1.4e-143 513.1 291 86.9
Gohir.A05G111900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 1.9e-143 512.7 291 86.3
Cfa000762 Carpinus fangiana HOM05D004135 ORTHO05D005558 7.9e-142 507.3 291 85.6
Gorai.005G119100 Gossypium raimondii HOM05D004135 ORTHO05D005558 1.4e-141 506.5 292 84.9
Ciclev10016127m.g Citrus clementina HOM05D004135 ORTHO05D005558 3.0e-141 505.4 292 84.9
Manes.06G053900 Manihot esculenta HOM05D004135 ORTHO05D005558 3.0e-141 505.4 289 85.5
Gohir.D02G104900 Gossypium hirsutum HOM05D004135 ORTHO05D005558 3.9e-141 505.0 292 84.6
MELO3C007042.2 Cucumis melo HOM05D004135 ORTHO05D005558 8.8e-141 503.8 289 83.7
CiPaw.09G148400 Carya illinoinensis HOM05D004135 ORTHO05D005558 2.0e-140 502.7 291 83.5
ClCG01G025420 Citrullus lanatus HOM05D004135 ORTHO05D005558 4.3e-140 501.5 289 83.7
CsaV3_6G052670 Cucumis sativus L. HOM05D004135 ORTHO05D005558 4.3e-140 501.5 289 83.0
Gohir.A02G088700 Gossypium hirsutum HOM05D004135 ORTHO05D005558 4.3e-140 501.5 292 84.2
Duzib235G1539 Durio zibethinus HOM05D004135 ORTHO05D005558 7.4e-140 500.7 291 84.9
Manes.14G126900 Manihot esculenta HOM05D004135 ORTHO05D005558 2.8e-139 498.8 289 85.1
Thecc.06G007700 Theobroma cacao HOM05D004135 ORTHO05D005558 2.4e-138 495.7 294 84.0
QL05p064858 Quercus lobata HOM05D004135 ORTHO05D005558 5.3e-138 494.6 290 83.1
Duzib160G0522 Durio zibethinus HOM05D004135 ORTHO05D005558 1.2e-137 493.4 291 83.8
Sed0027064 Sechium edule HOM05D004135 ORTHO05D005558 2.6e-137 492.3 289 81.7
CANSAT35G0477 Cannabis sativa HOM05D004135 ORTHO05D005558 1.3e-136 490.0 293 80.2
Gohir.D05G112400 Gossypium hirsutum HOM05D004135 ORTHO05D005558 2.9e-136 488.8 291 82.8
Gorai.009G116600 Gossypium raimondii HOM05D004135 ORTHO05D005558 5.0e-136 488.0 291 82.8
SalBow8G1631 Salvia bowleyana HOM05D004135 ORTHO05D005558 5.0e-136 488.0 294 82.7
SalBow8G2729 Salvia bowleyana HOM05D004135 ORTHO05D005558 5.0e-136 488.0 294 82.7
GSVIVG01021747001 Vitis vinifera HOM05D004135 ORTHO05D005558 1.1e-135 486.9 289 83.0
Sed0006315 Sechium edule HOM05D004135 ORTHO05D005558 4.2e-135 485.0 290 81.7
Prupe.4G101800 Prunus persica HOM05D004135 ORTHO05D005558 9.4e-135 483.8 294 81.0
Oeu060331.1 Olea europaea HOM05D004135 ORTHO05D005558 1.2e-134 483.4 288 82.6
MSTRG.7569 Avicennia marina HOM05D004135 ORTHO05D005558 6.1e-134 481.1 292 80.8
Eucgr.D01026 Eucalyptus grandis HOM05D004135 ORTHO05D005558 7.9e-134 480.7 288 81.6
AUR62027344 Chenopodium quinoa HOM05D004135 ORTHO05D005558 1.4e-133 479.9 289 81.3
CAN.G675.30 Capsicum annuum HOM05D004135 ORTHO05D005558 1.8e-133 479.6 290 81.4
Hma1.2p1_0300F.1_g117980 Hydrangea macrophylla HOM05D004135 ORTHO05D005558 5.1e-133 478.0 289 79.6
PSO541G2415 Papaver somniferum HOM05D004135 ORTHO05D005558 5.1e-133 478.0 289 80.6
MSTRG.16319 Avicennia marina HOM05D004135 ORTHO05D005558 8.8e-133 477.2 292 80.8
Sabra11G0144000 Salix brachista HOM05D004135 ORTHO05D005558 8.8e-133 477.2 306 79.1
Sc24g0002580 Simmondsia chinensis HOM05D004135 ORTHO05D005558 2.6e-132 475.7 289 80.6
TAR629G2923 Trochodendron aralioides HOM05D004135 ORTHO05D005558 3.3e-132 475.3 289 79.2
PGR083G2348 Punica granatum HOM05D004135 ORTHO05D005558 4.4e-132 474.9 294 79.6
AUR62042515 Chenopodium quinoa HOM05D004135 ORTHO05D005558 7.4e-132 474.2 289 80.3
Migut.M01941 Erythranthe guttata HOM05D004135 ORTHO05D005558 9.7e-132 473.8 294 80.3
Nn7g38349 Nelumbo nucifera HOM05D004135 ORTHO05D005558 1.3e-131 473.4 293 79.9
Nitab4.5_0012414g0010 Nicotiana tabacum HOM05D004135 ORTHO05D005558 1.7e-131 473.0 289 80.3
Peaxi162Scf00195g00518 Petunia axillaris HOM05D004135 ORTHO05D005558 1.7e-131 473.0 289 80.3
Nitab4.5_0001219g0030 Nicotiana tabacum HOM05D004135 ORTHO05D005558 2.2e-131 472.6 289 80.3
TAR627G0684 Trochodendron aralioides HOM05D004135 ORTHO05D005558 2.2e-131 472.6 289 79.6
EL10Ac8g19524 Beta vulgaris HOM05D004135 ORTHO05D005558 2.8e-131 472.2 289 80.3
unitig_748.g7354 Utricularia gibba HOM05D004135 ORTHO05D005558 3.7e-131 471.9 293 79.5
Lsat_1_v5_gn_1_86700 Lactuca sativa HOM05D004135 ORTHO05D005558 6.3e-131 471.1 289 78.9
Solyc02g069585.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 6.3e-131 471.1 289 80.3
CDE02G1412 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 8.2e-131 470.7 289 78.5
PSO675G0864 Papaver somniferum HOM05D004135 ORTHO05D005558 8.2e-131 470.7 289 79.2
DCAR_003828 Daucus carota HOM05D004135 ORTHO05D005558 1.1e-130 470.3 291 78.7
Lj1A1156T44 Lonicera japonica HOM05D004135 ORTHO05D005558 1.1e-130 470.3 301 77.7
PGSC0003DMG400021137 Solanum tuberosum HOM05D004135 ORTHO05D005558 1.8e-130 469.5 290 79.7
Sopen02g018720 Solanum pennellii HOM05D004135 ORTHO05D005558 7.0e-130 467.6 289 79.6
Aqoxy6G00202 Aquilegia oxysepala HOM05D004135 ORTHO05D005558 1.6e-129 466.5 289 78.9
HanXRQChr11g0340901 Helianthus annuus HOM05D004135 ORTHO05D005558 1.6e-129 466.5 289 77.9
SGA_v2.0_scaffold298G47640 Striga asiatica HOM05D004135 ORTHO05D005558 1.6e-129 466.5 329 73.9
Lj2A337T32 Lonicera japonica HOM05D004135 ORTHO05D005558 2.0e-129 466.1 286 80.4
HanXRQChr04g0119201 Helianthus annuus HOM05D004135 ORTHO05D005558 2.6e-129 465.7 291 78.7
Sopen02g009560 Solanum pennellii HOM05D004135 ORTHO05D005558 3.5e-129 465.3 288 80.6
Os04g0612600 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 5.9e-129 464.5 289 78.5
PGSC0003DMG400031401 Solanum tuberosum HOM05D004135 ORTHO05D005558 7.7e-129 464.2 288 80.2
TWI81G0788 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 1.0e-128 463.8 290 80.0
Solyc02g030243.1 Solanum lycopersicum HOM05D004135 ORTHO05D005558 2.2e-128 462.6 288 80.2
Lsat_1_v5_gn_7_31180 Lactuca sativa HOM05D004135 ORTHO05D005558 3.8e-128 461.8 291 79.0
DCAR_007807 Daucus carota HOM05D004135 ORTHO05D005558 5.0e-128 461.5 292 78.4
Zm00001eb430730 Zea mays HOM05D004135 ORTHO05D005558 9.4e-127 457.2 289 77.5
ATR0763G246 Amborella trichopoda HOM05D004135 ORTHO05D005558 1.2e-126 456.8 289 75.1
Glyma.15G136100 Glycine max HOM05D004135 ORTHO05D005558 1.2e-126 456.8 286 77.6
Medtr2g032130 Medicago truncatula HOM05D004135 ORTHO05D005558 1.2e-126 456.8 289 76.5
Atru.chr6.3256 Acer truncatum HOM05D004135 ORTHO05D005558 1.6e-126 456.4 291 78.0
Ah.11g045310 Amaranthus hybridus HOM05D004135 ORTHO05D005558 2.1e-126 456.1 289 76.5
Nn4g26687 Nelumbo nucifera HOM05D004135 ORTHO05D005558 3.6e-126 455.3 289 76.5
HPP92_013200 Vanilla planifolia HOM05D004135 ORTHO05D005558 4.7e-126 454.9 287 79.8
Ca_00931_v3 Cicer arietinum L. HOM05D004135 ORTHO05D005558 1.0e-125 453.8 289 76.8
RcHm_v2.0_Chr5g0018341 Rosa chinensis HOM05D004135 ORTHO05D005558 2.3e-125 452.6 295 76.9
Glyma.09G030400 Glycine max HOM05D004135 ORTHO05D005558 3.0e-125 452.2 286 76.9
Lj6g0020585 Lotus japonicus HOM05D004135 ORTHO05D005558 5.2e-125 451.4 289 75.4
CSS0034299 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D005558 8.8e-125 450.7 301 74.1
Phvul.006G122500 Phaseolus vulgaris HOM05D004135 ORTHO05D005558 1.1e-124 450.3 286 76.9
vmacro03457 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 1.3e-123 446.8 305 73.1
TWI15G0841 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 3.7e-123 445.3 292 77.1
arahy.Tifrunner.gnm1.ann1.CJHC7K Arachis hypogaea HOM05D004135 ORTHO05D005558 2.4e-122 442.6 293 74.4
FvH4_3g11400 Fragaria vesca HOM05D004135 ORTHO05D005558 5.3e-122 441.4 294 74.5
Lalb_Chr20g0120301 Lupinus albus HOM05D004135 ORTHO05D005558 9.1e-122 440.7 289 74.4
TWI38G0133 Tripterygium wilfordii HOM05D004135 ORTHO05D005558 9.1e-122 440.7 292 76.4
MBI18_g26296_MAGBIO Magnolia biondii HOM05D004135 ORTHO05D005558 2.7e-121 439.1 309 71.8
MD05G1263700 Malus domestica HOM05D004135 ORTHO05D005558 7.7e-121 437.6 294 73.8
FAN21G1456 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.2e-120 436.0 296 73.6
FAN16G1287 Fragaria x ananassa HOM05D004135 ORTHO05D005558 3.8e-120 435.3 296 73.6
FAN25G0882 Fragaria x ananassa HOM05D004135 ORTHO05D005558 2.5e-119 432.6 293 74.1
ECA236G2122 Erigeron canadensis HOM05D000091 ORTHO05D001510 4.2e-119 431.8 274 77.4
Actinidia31378 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.2e-118 430.3 260 82.3
vmacro10993 Vaccinium macrocarpon HOM05D004135 ORTHO05D005558 3.0e-117 425.6 447 53.9
Haze_08569 Corylus avellana HOM05D004135 ORTHO05D005558 3.4e-116 422.2 311 70.7
Oeu052702.4 Olea europaea HOM05D004135 ORTHO05D005558 9.8e-116 420.6 300 72.7
VMungo0540G1545 Vigna mungo HOM05D004135 ORTHO05D005558 1.4e-114 416.8 286 72.4
Actinidia32352 Actinidia chinensis HOM05D004135 ORTHO05D005558 1.8e-114 416.4 291 74.2
MD10G1241400 Malus domestica HOM05D004135 ORTHO05D005558 2.4e-114 416.0 293 70.0
Psat1g164080 Pisum sativum HOM05D004135 ORTHO05D005558 1.1e-111 407.1 255 77.6
Pp3c27_2170 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.0e-109 400.6 289 66.4
TPR.G8030 Trifolium pratense HOM05D004135 ORTHO05D005558 1.8e-109 399.8 257 76.3
Dinv04216 Davidia involucrata HOM05D004135 ORTHO05D005558 4.0e-109 398.7 231 83.5
Zm00001eb432010 Zea mays HOM05D004135 ORTHO05D005558 7.5e-108 394.4 295 67.5
Cc09_g07090 Coffea canephora HOM05D004135 ORTHO05D005558 8.3e-107 391.0 234 81.2
Pp3c16_16890 Physcomitrium patens HOM05D004135 ORTHO05D005558 1.1e-106 390.6 289 64.7
Os04g0644700 Oryza sativa ssp. japonica HOM05D004135 ORTHO05D005558 1.4e-106 390.2 297 67.3
Pp3c6_18240 Physcomitrium patens HOM05D004135 ORTHO05D005558 4.1e-106 388.7 289 64.7
Mapoly0002s0056 Marchantia polymorpha HOM05D004135 ORTHO05D005558 1.6e-105 386.7 287 64.5
arahy.Tifrunner.gnm1.ann1.NB4WMM Arachis hypogaea HOM05D004135 ORTHO05D005558 2.2e-99 366.3 231 76.2
Rhsim02G0165800 Rhododendron simsii HOM05D004135 ORTHO05D005558 9.2e-98 360.9 297 64.3
AagrBONN_evm.TU.Sc2ySwM_117.3836 Anthoceros agrestis HOM05D004135 ORTHO05D005558 2.3e-93 346.3 294 57.8
COL.COLO4_26892 Corchorus olitorius HOM05D004135 ORTHO05D005558 1.7e-83 313.5 269 62.8
Actinidia25200 Actinidia chinensis HOM05D004135 ORTHO05D005558 2.2e-83 313.2 203 75.9
SMO358G0532 Selaginella moellendorffii HOM05D004135 ORTHO05D005558 2.7e-81 306.2 285 54.7
Cre13.g592450 Chlamydomonas reinhardtii HOM05D004135 ORTHO05D005558 8.6e-80 301.2 287 52.6
CBR_g34668 Chara braunii HOM05D004135 ORTHO05D005558 5.1e-72 275.4 287 49.1
PRCOL_00001868 Prasinoderma coloniale HOM05D004135 ORTHO05D005558 2.4e-69 266.5 285 48.1
MCO11G236 Micromonas commoda HOM05D004135 ORTHO05D005558 5.2e-69 265.4 281 47.3
CDE06G2577 Ceratophyllum demersum HOM05D004135 ORTHO05D005558 2.1e-65 253.4 163 73.6
Zm00001eb274480 Zea mays HOM05D004135 ORTHO05D005558 5.6e-55 218.8 154 67.5
Haze_05958 Corylus avellana HOM05D006556 ORTHO05D008146 2.8e-54 216.5 151 74.2
Thecc.06G007200 Theobroma cacao HOM05D004135 ORTHO05D005558 3.1e-53 213.0 113 92.0
COL.COLO4_29004 Corchorus olitorius HOM05D004135 ORTHO05D005558 2.4e-50 203.4 139 74.8
Zm00001eb135420 Zea mays HOM05D004135 ORTHO05D443401 2.1e-25 120.6 82 72.0
SGA_v2.0_scaffold147G36337 Striga asiatica HOM05D004135 ORTHO05D401852 2.3e-24 117.1 146 45.2
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 2.0e-23 114.0 78 74.4
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 5.7e-23 112.5 82 74.4
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 8.2e-22 108.6 78 73.1
SGA_v2.0_scaffold147G36336 Striga asiatica HOM05D004135 ORTHO05D000001 1.1e-21 108.2 161 39.8
Zm00001eb180170 Zea mays HOM05D004135 ORTHO05D444922 1.3e-19 101.3 75 66.7
RcHm_v2.0_Chr6g0289631 Rosa chinensis HOM05D004135 ORTHO05D008146 2.9e-19 100.1 61 78.7
AUR62011277 Chenopodium quinoa HOM05D004135 ORTHO05D138132 8.5e-19 98.6 52 90.4
Zm00001eb388920 Zea mays HOM05D000787 ORTHO05D001019 8.5e-19 98.6 148 45.3
RcHm_v2.0_Chr6g0289621 Rosa chinensis HOM05D004135 ORTHO05D028393 4.7e-17 92.8 70 64.3
CSS0024113 Camellia sinensis var. sinensis HOM05D004135 ORTHO05D028393 1.8e-16 90.9 57 73.7
RcHm_v2.0_Chr0c29g0501101 Rosa chinensis HOM05D004135 ORTHO05D028393 1.8e-13 80.9 58 65.5
RcHm_v2.0_Chr1g0337861 Rosa chinensis HOM05D004135 ORTHO05D028393 1.8e-13 80.9 58 65.5
Zm00001eb297670 Zea mays HOM05D004958 ORTHO05D005983 6.5e-11 72.4 54 68.5
Zm00001eb373640 Zea mays HOM05D004135 ORTHO05D444823 2.0e-07 60.8 59 61.0
VMungo0540G1336 Vigna mungo HOM05D000328 ORTHO05D000191 3.3e-07 60.1 41 65.9
AUR62044460 Chenopodium quinoa HOM05D004135 ORTHO05D137931 2.8e-06 57.0 38 76.3


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