Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g27989 Brassica carinata HOM05D000236 ORTHO05D000192 7.9e-61 236.9 116 100.0
Thhalv10023547m.g Eutrema salsugineum HOM05D000236 ORTHO05D000192 5.9e-24 114.4 110 60.0
AT1G63470 Arabidopsis thaliana HOM05D000236 ORTHO05D000192 2.2e-23 112.5 107 58.9
BraA09t37189Z Brassica rapa HOM05D000236 ORTHO05D000192 6.5e-23 110.9 104 60.6
A09p15490 Brassica napus HOM05D000236 ORTHO05D000192 2.5e-22 109.0 105 59.0
Carub.0002s0139 Capsella rubella HOM05D000236 ORTHO05D000192 1.4e-20 103.2 107 57.0
Sp2g01140 Schrenkiella parvula HOM05D000236 ORTHO05D000192 2.3e-20 102.4 111 54.1
Carub.0007s3505 Capsella rubella HOM05D011429 ORTHO05D000192 1.5e-19 99.8 111 56.8
C09p18740 Brassica napus HOM05D000236 ORTHO05D000192 2.0e-19 99.4 100 56.0
BolC9t54774H Brassica oleracea HOM05D000236 ORTHO05D000192 2.0e-19 99.4 100 56.0
CARHR047890 Cardamine hirsuta HOM05D000236 ORTHO05D000192 2.6e-19 99.0 112 51.8
Aa31LG2G800 Aethionema arabicum HOM05D000236 ORTHO05D000192 4.4e-19 98.2 99 54.5
A09p13670 Brassica napus HOM05D000236 ORTHO05D000192 5.7e-19 97.8 98 58.2
BraA09t37020Z Brassica rapa HOM05D000236 ORTHO05D000192 5.7e-19 97.8 98 58.2
THA.LOC104818049 Tarenaya hassleriana HOM05D000236 ORTHO05D000192 5.3e-17 91.3 100 52.0
AT1G63480 Arabidopsis thaliana HOM05D000236 ORTHO05D000192 1.0e-15 87.0 108 50.0
BcaB07g31402 Brassica carinata HOM05D000236 ORTHO05D000192 1.3e-15 86.7 110 49.1
BcaC04g22489 Brassica carinata HOM05D000236 ORTHO05D000192 1.3e-15 86.7 100 53.0
BolC9t54545H Brassica oleracea HOM05D000236 ORTHO05D000192 5.5e-14 81.3 101 54.5
THA.LOC104809391 Tarenaya hassleriana HOM05D000236 ORTHO05D000192 1.2e-13 80.1 100 47.0
C09p16340 Brassica napus HOM05D000236 ORTHO05D000192 7.5e-11 70.9 100 49.0
Aa31LG9G690 Aethionema arabicum HOM05D000236 ORTHO05D000192 4.1e-09 65.1 108 41.7
Thhalv10027818m.g Eutrema salsugineum HOM05D000236 ORTHO05D000192 6.6e-07 57.8 96 40.6


User provided reference genes

Program Settings