Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24972 Brassica carinata HOM05D008570 ORTHO05D005639 8.7e-60 234.2 198 100.0
BraA02t07079Z Brassica rapa HOM05D008570 ORTHO05D005639 1.6e-53 213.4 198 93.9
A02p20480 Brassica napus HOM05D008570 ORTHO05D005639 3.5e-53 212.2 198 93.4
BolC2t09364H Brassica oleracea HOM05D008570 ORTHO05D005639 1.3e-52 210.3 198 84.3
C02p33360 Brassica napus HOM05D008570 ORTHO05D005639 1.8e-52 209.9 198 86.4
BcaC08g47283 Brassica carinata HOM05D008570 ORTHO05D005639 9.7e-43 177.6 198 79.3
BolC6t40053H Brassica oleracea HOM05D008570 ORTHO05D005639 9.7e-43 177.6 198 79.3
A07p41750 Brassica napus HOM05D008570 ORTHO05D005639 2.4e-41 172.9 198 86.4
Thhalv10019152m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 2.4e-41 172.9 202 87.6
BcaC08g47112 Brassica carinata HOM05D008570 ORTHO05D005639 6.9e-41 171.4 198 86.9
C06p50130 Brassica napus HOM05D008570 ORTHO05D005639 2.2e-39 166.4 199 83.9
BraA07t31704Z Brassica rapa HOM05D008570 ORTHO05D005639 3.2e-38 162.5 204 83.3
A07p28610 Brassica napus HOM05D008570 ORTHO05D005639 5.5e-38 161.8 196 74.5
Carub.0002s2307 Capsella rubella HOM05D008570 ORTHO05D005639 1.2e-37 160.6 199 77.9
Sp5g31320 Schrenkiella parvula HOM05D008570 ORTHO05D005639 1.6e-37 160.2 203 83.7
C06p32190 Brassica napus HOM05D008570 ORTHO05D005639 3.7e-34 149.1 169 81.7
AT1G76180 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 1.1e-27 127.5 198 70.2
CARHR069730 Cardamine hirsuta HOM05D008570 ORTHO05D005639 7.0e-25 118.2 199 67.3
THA.LOC104809672 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 1.6e-24 117.1 208 63.5
Aa31LG4G6290 Aethionema arabicum HOM05D008570 ORTHO05D005639 2.7e-24 116.3 204 70.6
BcaC08g45541 Brassica carinata HOM05D008570 ORTHO05D005639 4.2e-22 109.0 136 81.6
THA.LOC104813763 Tarenaya hassleriana HOM05D008570 ORTHO05D005639 1.2e-19 100.9 200 67.5
AL2G36240 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 1.5e-19 100.5 135 71.1
AL1G33370 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 3.5e-16 89.4 173 53.8
Thhalv10008313m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 1.0e-15 87.8 258 54.7
AT1G20440 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 2.1e-13 80.1 183 55.2
Carub.0001s1991 Capsella rubella HOM05D008570 ORTHO05D005639 1.4e-12 77.4 175 46.9
Carub.0001s1992 Capsella rubella HOM05D008570 ORTHO05D005639 3.0e-12 76.3 189 57.7
BcaNung03383 Brassica carinata HOM05D008570 ORTHO05D005639 4.0e-12 75.9 217 55.8
C07p23020 Brassica napus HOM05D008570 ORTHO05D005639 4.0e-12 75.9 217 55.8
AT1G20450 Arabidopsis thaliana HOM05D008570 ORTHO05D005639 4.4e-11 72.4 183 57.4
BNapus_Darmor_BZH_scaffold_170p00020 Brassica napus HOM05D008570 ORTHO05D005639 9.8e-11 71.2 171 57.3
BolC7t42843H Brassica oleracea HOM05D008570 ORTHO05D005639 9.8e-11 71.2 221 56.1
BcaC05g25955 Brassica carinata HOM05D008570 ORTHO05D005639 1.3e-10 70.9 172 56.4
C05p19040 Brassica napus HOM05D008570 ORTHO05D005639 1.3e-10 70.9 172 56.4
BolC5t30605H Brassica oleracea HOM05D008570 ORTHO05D005639 2.8e-10 69.7 175 54.3
BcaB03g14320 Brassica carinata HOM05D008570 ORTHO05D005639 4.9e-10 68.9 222 53.2
A07p15780 Brassica napus HOM05D008570 ORTHO05D005639 8.3e-10 68.2 184 55.4
BraA06t24754Z Brassica rapa HOM05D008570 ORTHO05D005639 8.3e-10 68.2 78 57.7
Sp1g18160 Schrenkiella parvula HOM05D008570 ORTHO05D005639 8.3e-10 68.2 231 54.1
BraA07t29305Z Brassica rapa HOM05D008570 ORTHO05D005639 1.8e-09 67.0 222 55.4
A07p15670 Brassica napus HOM05D008570 ORTHO05D005639 3.1e-09 66.2 226 55.8
BcaB07g32047 Brassica carinata HOM05D008570 ORTHO05D005639 7.0e-09 65.1 191 53.4
CARHR020900 Cardamine hirsuta HOM05D008570 ORTHO05D005639 3.5e-08 62.8 163 53.4
Potri.005G248100 Populus trichocarpa HOM05D008201 ORTHO05D005639 1.0e-07 61.2 234 55.6
BcaC03g15649 Brassica carinata HOM05D002666 ORTHO05D011316 1.3e-07 60.8 70 55.7
AL1G33380 Arabidopsis lyrata HOM05D008570 ORTHO05D005639 2.3e-07 60.1 178 55.1
Manes.05G140400 Manihot esculenta HOM05D008201 ORTHO05D005639 2.9e-07 59.7 61 55.7
Thhalv10008706m.g Eutrema salsugineum HOM05D008570 ORTHO05D005639 8.6e-07 58.2 149 45.0
Lj4A14T47 Lonicera japonica HOM05D008201 ORTHO05D005639 3.3e-06 56.2 139 36.0
Medtr3g117290 Medicago truncatula HOM05D015205 ORTHO05D005639 4.3e-06 55.8 152 50.7


User provided reference genes

Program Settings