Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24311 Brassica carinata HOM05D004549 ORTHO05D005390 1.0e-100 370.2 204 100.0
BraA02t06507Z Brassica rapa HOM05D004549 ORTHO05D005390 1.1e-89 333.6 204 92.6
C02p23390 Brassica napus HOM05D004549 ORTHO05D005390 7.1e-89 330.9 204 92.6
BolC2t08472H Brassica oleracea HOM05D004549 ORTHO05D005390 7.1e-89 330.9 204 92.6
BcaC03g14868 Brassica carinata HOM05D004549 ORTHO05D005390 2.1e-88 329.3 204 92.2
A02p14440 Brassica napus HOM05D004549 ORTHO05D005390 2.7e-88 328.9 204 91.7
BcaB03g15371 Brassica carinata HOM05D004549 ORTHO05D005390 1.2e-83 313.5 205 88.8
Thhalv10019165m.g Eutrema salsugineum HOM05D004549 ORTHO05D005390 4.4e-83 311.6 204 88.2
A07p32430 Brassica napus HOM05D004549 ORTHO05D005390 1.3e-82 310.1 204 86.8
BraA07t30866Z Brassica rapa HOM05D004549 ORTHO05D005390 1.3e-82 310.1 204 86.8
C06p38460 Brassica napus HOM05D004549 ORTHO05D005390 3.7e-82 308.5 204 86.8
BolC6t38943H Brassica oleracea HOM05D004549 ORTHO05D005390 3.7e-82 308.5 204 86.8
BcaC08g46043 Brassica carinata HOM05D004549 ORTHO05D005390 4.6e-80 301.6 196 87.8
A07p34290 Brassica napus HOM05D004549 ORTHO05D005390 1.0e-79 300.4 204 84.3
C06p42290 Brassica napus HOM05D004549 ORTHO05D005390 3.3e-78 295.4 204 82.8
BraA07t31058Z Brassica rapa HOM05D004549 ORTHO05D005390 3.3e-78 295.4 204 82.8
Sp5g22750 Schrenkiella parvula HOM05D004549 ORTHO05D005390 3.3e-78 295.4 204 83.3
BolC6t39200H Brassica oleracea HOM05D004549 ORTHO05D005390 1.4e-76 290.0 204 82.8
BcaC08g46197 Brassica carinata HOM05D004549 ORTHO05D005390 1.5e-75 286.6 204 80.9
BcaB03g15168 Brassica carinata HOM05D004549 ORTHO05D005390 3.4e-75 285.4 204 82.4
CARHR060320 Cardamine hirsuta HOM05D004549 ORTHO05D005390 3.9e-63 245.4 200 74.5
THA.LOC104807755 Tarenaya hassleriana HOM05D004549 ORTHO05D005390 1.5e-62 243.4 202 73.3
Aa31LG4G12260 Aethionema arabicum HOM05D004549 ORTHO05D005390 9.3e-57 224.2 204 70.1
Carub.0002s1417 Capsella rubella HOM05D004549 ORTHO05D005390 2.5e-54 216.1 202 67.8
AT1G67740 Arabidopsis thaliana HOM05D004549 ORTHO05D005390 6.9e-52 208.0 202 64.9
AL2G26440 Arabidopsis lyrata HOM05D004549 ORTHO05D005390 1.3e-50 203.8 202 63.9
FvH4_4g25080 Fragaria vesca HOM05D004549 ORTHO05D005390 2.7e-48 196.1 213 61.5
FAN12G3122 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.7e-48 196.1 213 61.5
COL.COLO4_23543 Corchorus olitorius HOM05D004549 ORTHO05D005390 1.0e-47 194.1 218 59.2
Manes.12G018800 Manihot esculenta HOM05D004549 ORTHO05D005390 1.3e-47 193.7 214 57.9
Potri.010G052000 Populus trichocarpa HOM05D004549 ORTHO05D005390 1.3e-47 193.7 214 57.9
Hma1.2p1_0079F.1_g041330 Hydrangea macrophylla HOM05D004549 ORTHO05D005390 2.3e-47 193.0 209 57.9
Manes.13G019200 Manihot esculenta HOM05D004549 ORTHO05D005390 8.7e-47 191.0 214 57.9
RcHm_v2.0_Chr4g0432261 Rosa chinensis HOM05D004549 ORTHO05D005390 1.1e-46 190.7 212 60.8
FAN17G2166 Fragaria x ananassa HOM05D004549 ORTHO05D005390 1.9e-46 189.9 213 61.0
FAN22G0462 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.5e-46 189.5 213 60.6
FAN22G0861 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.5e-46 189.5 213 60.6
Lalb_Chr11g0075581 Lupinus albus HOM05D004549 ORTHO05D005390 3.3e-46 189.1 211 55.9
ClCG08G017510 Citrullus lanatus HOM05D004549 ORTHO05D005390 4.3e-46 188.7 216 56.5
FAN07G0129 Fragaria x ananassa HOM05D004549 ORTHO05D005390 4.3e-46 188.7 213 60.6
Atru.chr11.2199 Acer truncatum HOM05D004549 ORTHO05D005390 5.7e-46 188.3 219 54.3
Duzib251G0883 Durio zibethinus HOM05D004549 ORTHO05D005390 5.7e-46 188.3 218 55.5
MELO3C010708.2 Cucumis melo HOM05D004549 ORTHO05D005390 7.4e-46 188.0 216 56.0
arahy.Tifrunner.gnm1.ann1.J2LHWB Arachis hypogaea HOM05D004549 ORTHO05D005390 1.3e-45 187.2 220 58.2
Dinv11022 Davidia involucrata HOM05D004549 ORTHO05D005390 1.3e-45 187.2 207 56.0
CsaV3_2G025120 Cucumis sativus L. HOM05D004549 ORTHO05D005390 2.1e-45 186.4 216 55.1
Ciclev10032789m.g Citrus clementina HOM05D004549 ORTHO05D005390 4.8e-45 185.3 214 57.5
Sabra08G0138600 Salix brachista HOM05D004549 ORTHO05D005390 4.8e-45 185.3 211 56.9
Gohir.D01G153400 Gossypium hirsutum HOM05D004549 ORTHO05D005390 8.2e-45 184.5 218 56.0
Gorai.002G190000 Gossypium raimondii HOM05D004549 ORTHO05D005390 8.2e-45 184.5 218 56.0
Cpa.g.sc122.10 Carica papaya HOM05D004549 ORTHO05D005390 1.8e-44 183.3 211 56.4
Haze_12303 Corylus avellana HOM05D004549 ORTHO05D005390 1.8e-44 183.3 217 56.2
Gohir.A01G156900 Gossypium hirsutum HOM05D004549 ORTHO05D005390 1.8e-44 183.3 218 55.5
Cfa009269 Carpinus fangiana HOM05D004549 ORTHO05D005390 2.4e-44 183.0 216 56.5
Actinidia08109 Actinidia chinensis HOM05D004549 ORTHO05D005390 3.1e-44 182.6 213 58.2
CSS0012497 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 3.1e-44 182.6 213 55.4
Prupe.1G239600 Prunus persica HOM05D004549 ORTHO05D005390 3.1e-44 182.6 219 58.9
Rhsim12G0037700 Rhododendron simsii HOM05D004549 ORTHO05D005390 3.1e-44 182.6 211 55.5
Potri.008G181900 Populus trichocarpa HOM05D004549 ORTHO05D005390 9.0e-44 181.0 209 55.5
Cc11_g16230 Coffea canephora HOM05D004549 ORTHO05D005390 1.5e-43 180.3 210 55.7
Sed0013558 Sechium edule HOM05D004549 ORTHO05D005390 1.5e-43 180.3 214 55.6
Eucgr.B03236 Eucalyptus grandis HOM05D004549 ORTHO05D005390 2.0e-43 179.9 218 56.4
Medtr8g089610 Medicago truncatula HOM05D004549 ORTHO05D005390 2.0e-43 179.9 212 58.5
Thecc.02G268400 Theobroma cacao HOM05D004549 ORTHO05D005390 3.4e-43 179.1 218 55.0
Ah.02g130410 Amaranthus hybridus HOM05D004549 ORTHO05D005390 4.5e-43 178.7 209 54.5
Ca_17796_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.0e-42 177.6 210 56.7
ECA246G5237 Erigeron canadensis HOM05D004549 ORTHO05D005390 1.0e-42 177.6 208 58.2
AUR62005536 Chenopodium quinoa HOM05D004549 ORTHO05D005390 1.3e-42 177.2 209 56.9
Ca_25121_v3 Cicer arietinum L. HOM05D004549 ORTHO05D005390 1.3e-42 177.2 210 55.2
Lalb_Chr23g0277771 Lupinus albus HOM05D004549 ORTHO05D005390 1.3e-42 177.2 212 54.7
MD13G1106700 Malus domestica HOM05D004549 ORTHO05D005390 1.3e-42 177.2 207 58.0
CiPaw.11G070800 Carya illinoinensis HOM05D004549 ORTHO05D005390 1.7e-42 176.8 216 55.6
HanXRQChr17g0540101 Helianthus annuus HOM05D004549 ORTHO05D005390 1.7e-42 176.8 207 55.1
TAR622G0384 Trochodendron aralioides HOM05D004549 ORTHO05D005390 1.7e-42 176.8 216 54.2
Glyma.11G245400 Glycine max HOM05D004549 ORTHO05D005390 2.2e-42 176.4 213 55.9
Psat7g059720 Pisum sativum HOM05D004549 ORTHO05D005390 2.2e-42 176.4 214 58.4
Duzib268G0224 Durio zibethinus HOM05D004549 ORTHO05D005390 2.9e-42 176.0 218 54.1
Nn4g22506 Nelumbo nucifera HOM05D004549 ORTHO05D005390 2.9e-42 176.0 218 54.6
CANSAT01G2573 Cannabis sativa HOM05D004549 ORTHO05D005390 3.8e-42 175.6 216 55.6
Oeu059785.1 Olea europaea HOM05D004549 ORTHO05D005390 3.8e-42 175.6 215 57.2
Migut.E00226 Erythranthe guttata HOM05D004549 ORTHO05D005390 5.0e-42 175.3 209 58.4
Lj6g0007818 Lotus japonicus HOM05D004549 ORTHO05D005390 5.0e-42 175.3 219 56.6
MD16G1106800 Malus domestica HOM05D004549 ORTHO05D005390 5.0e-42 175.3 207 58.0
PGR102G3304 Punica granatum HOM05D004549 ORTHO05D005390 6.5e-42 174.9 213 54.9
QL03p055962 Quercus lobata HOM05D004549 ORTHO05D005390 6.5e-42 174.9 217 54.8
Lj6g0014292 Lotus japonicus HOM05D004549 ORTHO05D005390 8.5e-42 174.5 219 55.3
SalBow8G0177 Salvia bowleyana HOM05D004549 ORTHO05D005390 8.5e-42 174.5 207 55.1
VMungo0251G3559 Vigna mungo HOM05D004549 ORTHO05D005390 1.1e-41 174.1 206 56.3
Lsat_1_v5_gn_3_29100 Lactuca sativa HOM05D004549 ORTHO05D005390 1.4e-41 173.7 212 55.7
TWI18G0700 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.4e-41 173.7 223 54.7
Psat5g094200 Pisum sativum HOM05D004549 ORTHO05D005390 1.9e-41 173.3 215 56.3
Lalb_Chr07g0185571 Lupinus albus HOM05D004549 ORTHO05D005390 2.5e-41 172.9 216 55.6
Sopen10g028800 Solanum pennellii HOM05D004549 ORTHO05D005390 3.2e-41 172.6 217 54.4
Aqoxy3G01353 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 4.2e-41 172.2 207 57.5
MSTRG.13333 Avicennia marina HOM05D004549 ORTHO05D005390 4.2e-41 172.2 210 54.3
AUR62024202 Chenopodium quinoa HOM05D004549 ORTHO05D005390 4.2e-41 172.2 210 56.2
MBI11_g33737_MAGBIO Magnolia biondii HOM05D004549 ORTHO05D005390 4.2e-41 172.2 218 52.8
Peaxi162Scf00797g00002 Petunia axillaris HOM05D004549 ORTHO05D005390 4.2e-41 172.2 210 55.7
VMungo1383G1841 Vigna mungo HOM05D004549 ORTHO05D005390 4.2e-41 172.2 206 56.8
Ah.03g133600 Amaranthus hybridus HOM05D004549 ORTHO05D005390 5.5e-41 171.8 216 54.2
Sed0000703 Sechium edule HOM05D004549 ORTHO05D005390 5.5e-41 171.8 207 57.5
TPR.G6278 Trifolium pratense HOM05D004549 ORTHO05D005390 5.5e-41 171.8 211 53.6
TWI36G1485 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 5.5e-41 171.8 224 54.0
EL10As2g23198 Beta vulgaris HOM05D004549 ORTHO05D005390 7.2e-41 171.4 210 54.3
Phvul.001G257100 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 7.2e-41 171.4 212 55.7
Medtr3g086230 Medicago truncatula HOM05D004549 ORTHO05D005390 9.3e-41 171.0 210 57.6
TAR374G0110 Trochodendron aralioides HOM05D004549 ORTHO05D005390 9.3e-41 171.0 216 53.2
Oeu004470.1 Olea europaea HOM05D004549 ORTHO05D005390 1.2e-40 170.6 213 54.9
Phvul.002G253700 Phaseolus vulgaris HOM05D004549 ORTHO05D005390 3.6e-40 169.1 206 53.9
PGSC0003DMG400007201 Solanum tuberosum HOM05D004549 ORTHO05D005390 6.1e-40 168.3 210 54.3
TWI75G1071 Tripterygium wilfordii HOM05D004549 ORTHO05D005390 1.0e-39 167.5 212 53.3
CAN.G959.23 Capsicum annuum HOM05D004549 ORTHO05D005390 3.0e-39 166.0 214 53.3
PSO017G6717 Papaver somniferum HOM05D004549 ORTHO05D005390 3.0e-39 166.0 220 53.6
ATR0824G259 Amborella trichopoda HOM05D004549 ORTHO05D005390 3.9e-39 165.6 200 53.5
PSO478G3953 Papaver somniferum HOM05D004549 ORTHO05D005390 3.9e-39 165.6 220 53.6
SGA_v2.0_scaffold87G27112 Striga asiatica HOM05D004549 ORTHO05D005390 3.9e-39 165.6 213 53.1
SGA_v2.0_scaffold391G50640 Striga asiatica HOM05D002973 ORTHO05D003383 5.1e-39 165.2 211 54.5
MELO3C011911.2 Cucumis melo HOM05D004549 ORTHO05D005390 1.1e-38 164.1 209 57.9
Oeu009692.1 Olea europaea HOM05D004549 ORTHO05D005390 1.1e-38 164.1 211 53.6
Aqoxy5G03620 Aquilegia oxysepala HOM05D004549 ORTHO05D005390 1.5e-38 163.7 219 52.5
CSS0014809 Camellia sinensis var. sinensis HOM05D004549 ORTHO05D005390 1.9e-38 163.3 181 58.6
unitig_744.g24296 Utricularia gibba HOM05D004549 ORTHO05D005390 3.3e-38 162.5 211 54.5
Peaxi162Scf00128g00628 Petunia axillaris HOM05D004549 ORTHO05D005390 9.7e-38 161.0 211 54.5
Nitab4.5_0008037g0010 Nicotiana tabacum HOM05D004549 ORTHO05D005390 1.3e-37 160.6 210 52.9
Glyma.05G172300 Glycine max HOM05D004549 ORTHO05D005390 2.2e-37 159.8 206 51.0
unitig_62.g23660 Utricularia gibba HOM05D004549 ORTHO05D005390 2.2e-37 159.8 212 53.3
CsaV3_5G030690 Cucumis sativus L. HOM05D004549 ORTHO05D005354 3.7e-37 159.1 208 54.3
Sc11g0000800 Simmondsia chinensis HOM05D004549 ORTHO05D005390 5.3e-36 155.2 208 51.9
CDE06G0408 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 7.7e-35 151.4 206 52.4
CDE08G0789 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 7.7e-35 151.4 200 52.0
Glyma.18G011800 Glycine max HOM05D004549 ORTHO05D005390 1.1e-33 147.5 207 50.2
Mapoly0083s0047 Marchantia polymorpha HOM05D004549 ORTHO05D005390 1.6e-32 143.7 159 54.7
Os08g0119800 Oryza sativa ssp. japonica HOM05D004549 ORTHO05D005390 8.8e-31 137.9 119 64.7
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 5.7e-30 135.2 150 56.7
SEGI_41357 Sequoiadendron giganteum HOM05D004549 ORTHO05D005390 4.8e-29 132.1 187 49.7
Duzib248G1249 Durio zibethinus HOM05D004549 ORTHO05D005390 8.2e-29 131.3 184 49.5
HPP92_017052 Vanilla planifolia HOM05D004549 ORTHO05D005390 1.1e-28 131.0 208 45.7
TPR.G35846 Trifolium pratense HOM05D004549 ORTHO05D005390 3.4e-27 125.9 183 51.4
Pp3c23_21280 Physcomitrium patens HOM05D004549 ORTHO05D005390 7.7e-27 124.8 157 47.8
CBR_g38912 Chara braunii HOM05D004549 ORTHO05D005390 1.7e-26 123.6 152 51.3
Pp3c8_24120 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.7e-26 123.6 157 47.8
Pp3c24_20010 Physcomitrium patens HOM05D004549 ORTHO05D005390 1.1e-25 120.9 157 45.9
Ciclev10022422m.g Citrus clementina HOM05D004549 ORTHO05D005390 2.3e-23 113.2 190 47.9
SMO137G0014 Selaginella moellendorffii HOM05D004549 ORTHO05D005390 9.7e-22 107.8 160 43.8
CDE09G1301 Ceratophyllum demersum HOM05D004549 ORTHO05D005390 7.7e-19 98.2 207 38.2
Sc04g0001060 Simmondsia chinensis HOM05D004549 ORTHO05D005390 2.2e-18 96.7 151 45.7
Zm00001eb173510 Zea mays HOM05D004549 ORTHO05D005390 4.7e-16 89.0 141 44.0
Zm00001eb261260 Zea mays HOM05D004549 ORTHO05D005390 1.0e-15 87.8 204 40.2
Ah.08g218300 Amaranthus hybridus HOM05D004549 ORTHO05D005390 2.6e-14 83.2 176 41.5
unitig_52.g17185 Utricularia gibba HOM05D004549 ORTHO05D005390 2.6e-14 83.2 86 59.3
Nn3g16614 Nelumbo nucifera HOM05D004549 ORTHO05D005390 5.7e-14 82.0 124 46.0
PRCOL_00004421 Prasinoderma coloniale HOM05D004549 ORTHO05D005390 8.2e-13 78.2 134 41.0
AUR62001261 Chenopodium quinoa HOM05D004549 ORTHO05D005390 4.1e-12 75.9 118 49.2
Prupe.5G159900 Prunus persica HOM05D004549 ORTHO05D005390 3.5e-11 72.8 133 39.8
RcHm_v2.0_Chr7g0191491 Rosa chinensis HOM05D004549 ORTHO05D005390 4.5e-11 72.4 118 41.5
Medtr2g046810 Medicago truncatula HOM05D004549 ORTHO05D005390 1.3e-10 70.9 155 39.4
FAN08G1783 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.2e-10 70.1 66 57.6
FAN18G0098 Fragaria x ananassa HOM05D004549 ORTHO05D005390 2.9e-10 69.7 60 60.0
MCO16G101 Micromonas commoda HOM05D004549 ORTHO05D005390 3.0e-07 59.7 112 38.4


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