Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22642 Brassica carinata HOM05D000203 ORTHO05D000135 3.2e-87 325.1 169 100.0
C02p11680 Brassica napus HOM05D000203 ORTHO05D000135 5.1e-69 264.6 173 76.9
BraA02t05726Z Brassica rapa HOM05D000203 ORTHO05D000135 5.1e-69 264.6 173 76.9
BolC2t07264H Brassica oleracea HOM05D000203 ORTHO05D000135 9.7e-68 260.4 173 75.1
BcaC03g13972 Brassica carinata HOM05D000203 ORTHO05D000135 6.3e-67 257.7 173 74.6
BcaB05g22648 Brassica carinata HOM05D000203 ORTHO05D000135 4.2e-47 191.8 174 66.7
BraA02t05723Z Brassica rapa HOM05D000203 ORTHO05D000135 8.6e-40 167.5 137 65.7
BraA02t05725Z Brassica rapa HOM05D000203 ORTHO05D000135 2.5e-39 166.0 137 65.0
BolC2t07260H Brassica oleracea HOM05D000203 ORTHO05D000135 7.2e-39 164.5 174 60.3
Sp6g22010 Schrenkiella parvula HOM05D000203 ORTHO05D000135 1.4e-37 160.2 169 54.4
BolC2t07262H Brassica oleracea HOM05D000203 ORTHO05D039916 7.0e-34 147.9 170 58.2
BraA02t05721Z Brassica rapa HOM05D000203 ORTHO05D000135 2.7e-33 146.0 174 57.5
C02p11670 Brassica napus HOM05D000203 ORTHO05D000135 5.6e-31 138.3 175 56.0
BcaC03g13970 Brassica carinata HOM05D000203 ORTHO05D039916 1.6e-30 136.7 174 50.6
BcaB08g36341 Brassica carinata HOM05D000203 ORTHO05D000135 2.6e-28 129.4 173 48.0
Thhalv10015908m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 2.9e-27 125.9 173 43.9
Thhalv10012100m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 1.9e-26 123.2 176 44.3
AL8G37040 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 9.2e-26 120.9 180 45.0
Sp6g22020 Schrenkiella parvula HOM05D000203 ORTHO05D000135 3.9e-24 115.5 128 52.3
Thhalv10003426m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 8.6e-24 114.4 215 39.1
BcaC04g19703 Brassica carinata HOM05D000203 ORTHO05D000135 1.1e-23 114.0 172 45.9
C09p53080 Brassica napus HOM05D000203 ORTHO05D000135 1.1e-23 114.0 172 45.9
Carub.0008s2113 Capsella rubella HOM05D000203 ORTHO05D000135 1.1e-23 114.0 142 47.2
A10p17650 Brassica napus HOM05D000203 ORTHO05D000135 1.9e-23 113.2 172 45.9
BolC9t58183H Brassica oleracea HOM05D000203 ORTHO05D000135 5.6e-23 111.7 172 45.3
Thhalv10000432m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 1.6e-22 110.2 138 47.1
AT5G60440 Arabidopsis thaliana HOM05D000203 ORTHO05D000135 1.8e-21 106.7 193 44.0
CARHR274100 Cardamine hirsuta HOM05D000203 ORTHO05D000135 5.8e-20 101.7 173 41.0
C02p11630 Brassica napus HOM05D000203 ORTHO05D027268 3.0e-16 89.4 66 65.2
Thhalv10022102m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 5.1e-16 88.6 175 40.0
Sp3g17710 Schrenkiella parvula HOM05D000203 ORTHO05D000135 6.6e-16 88.2 173 40.5
C02p11660 Brassica napus HOM05D000203 ORTHO05D027268 1.9e-15 86.7 66 62.1
BcaB04g20684 Brassica carinata HOM05D000203 ORTHO05D000135 3.6e-14 82.4 145 39.3
BcaB06g26038 Brassica carinata HOM05D000203 ORTHO05D000135 3.6e-14 82.4 171 36.8
C05p45090 Brassica napus HOM05D000203 ORTHO05D000135 4.7e-14 82.0 178 38.2
BolC5t33235H Brassica oleracea HOM05D000203 ORTHO05D000135 4.7e-14 82.0 178 38.2
BcaC05g28428 Brassica carinata HOM05D000203 ORTHO05D000135 1.1e-13 80.9 177 37.9
A01p35040 Brassica napus HOM05D000203 ORTHO05D000135 2.3e-13 79.7 172 37.8
BcaC09g48928 Brassica carinata HOM05D000203 ORTHO05D000135 4.0e-13 79.0 173 38.7
C01p44450 Brassica napus HOM05D000203 ORTHO05D000135 4.0e-13 79.0 173 38.7
BolC1t04410H Brassica oleracea HOM05D000203 ORTHO05D000135 4.0e-13 79.0 173 38.7
BraA01t03585Z Brassica rapa HOM05D000203 ORTHO05D000135 8.9e-13 77.8 173 38.7
BcaC03g13969 Brassica carinata HOM05D000203 ORTHO05D027268 1.2e-12 77.4 83 60.2
A05p29880 Brassica napus HOM05D000203 ORTHO05D000135 3.4e-12 75.9 173 36.4
SpUn0001_0530 Schrenkiella parvula HOM05D000203 ORTHO05D000135 4.4e-12 75.5 84 51.2
A05p30070 Brassica napus HOM05D000203 ORTHO05D000135 9.9e-12 74.3 173 35.8
Thhalv10003315m.g Eutrema salsugineum HOM05D000203 ORTHO05D000135 9.9e-12 74.3 179 37.4
BcaC03g13971 Brassica carinata HOM05D000203 ORTHO05D027268 1.3e-11 73.9 73 61.6
BraA05t21847Z Brassica rapa HOM05D000203 ORTHO05D000135 2.2e-11 73.2 173 35.3
THA.LOC104809103 Tarenaya hassleriana HOM05D000203 ORTHO05D000135 1.4e-10 70.5 150 34.7
AL3G33140 Arabidopsis lyrata HOM05D000203 ORTHO05D000135 4.1e-10 68.9 121 36.4
C02p45880 Brassica napus HOM05D000203 ORTHO05D000135 2.7e-09 66.2 158 37.3
Aa31LG1G12470 Aethionema arabicum HOM05D000203 ORTHO05D000135 1.0e-08 64.3 174 32.2


User provided reference genes

Program Settings