Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21947 Brassica carinata HOM05D004189 ORTHO05D004092 2.7e-298 1028.1 604 100.0
C02p19870 Brassica napus HOM05D004189 ORTHO05D004092 7.4e-195 684.5 651 69.4
BolC2t08122H Brassica oleracea HOM05D004189 ORTHO05D004092 7.4e-195 684.5 651 69.4
BcaC03g14535 Brassica carinata HOM05D004189 ORTHO05D004092 1.6e-189 666.8 651 68.7
A02p11890 Brassica napus HOM05D004189 ORTHO05D004092 1.2e-181 640.6 621 69.2
Sp6g14580 Schrenkiella parvula HOM05D004189 ORTHO05D004092 2.5e-126 456.8 734 52.9
BraA02t06255Z Brassica rapa HOM05D004189 ORTHO05D004092 2.5e-113 413.7 707 48.5
AT5G52300 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 1.7e-82 311.2 692 41.2
Carub.0008s1240 Capsella rubella HOM05D004189 ORTHO05D004092 2.1e-80 304.3 712 38.2
Thhalv10015427m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 3.7e-77 293.5 871 36.4
C02p19900 Brassica napus HOM05D004189 ORTHO05D004092 3.1e-76 290.4 664 39.9
BolC2t08123H Brassica oleracea HOM05D004189 ORTHO05D004092 3.1e-76 290.4 664 39.9
Thhalv10013021m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 9.1e-76 288.9 687 39.9
CARHR265280 Cardamine hirsuta HOM05D004189 ORTHO05D004092 2.0e-75 287.7 715 38.7
BolC3t14234H Brassica oleracea HOM05D004189 ORTHO05D004092 8.0e-72 275.8 683 38.7
BcaC03g14545 Brassica carinata HOM05D004189 ORTHO05D004092 3.7e-69 266.9 663 38.5
C03p18370 Brassica napus HOM05D004189 ORTHO05D004092 8.3e-69 265.8 666 38.6
Carub.0008s1241 Capsella rubella HOM05D004189 ORTHO05D004092 1.8e-68 264.6 728 39.4
BcaC01g06182 Brassica carinata HOM05D004189 ORTHO05D004092 1.2e-67 261.9 697 39.3
A03p15730 Brassica napus HOM05D004189 ORTHO05D004092 5.9e-67 259.6 718 39.6
Sp6g14560 Schrenkiella parvula HOM05D004189 ORTHO05D004092 7.7e-67 259.2 738 38.9
BraA03t10863Z Brassica rapa HOM05D004189 ORTHO05D004092 2.2e-66 257.7 700 39.7
A02p11900 Brassica napus HOM05D004189 ORTHO05D004092 4.7e-64 250.0 693 35.9
AL8G26690 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 1.0e-63 248.8 665 35.5
AT5G52310 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 2.0e-62 244.6 700 38.4
BcaB01g04200 Brassica carinata HOM05D004189 ORTHO05D004092 9.8e-62 242.3 718 39.0
CARHR265290 Cardamine hirsuta HOM05D004189 ORTHO05D004092 8.3e-61 239.2 762 38.3
AL8G26710 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 2.3e-55 221.1 745 38.5
BcaB05g21946 Brassica carinata HOM05D004189 ORTHO05D004092 4.0e-55 220.3 648 37.5
C07p54440 Brassica napus HOM05D004189 ORTHO05D004092 4.4e-38 163.7 642 34.0
BraA03t14684Z Brassica rapa HOM05D004189 ORTHO05D004092 2.2e-37 161.4 646 31.7
A03p56110 Brassica napus HOM05D004189 ORTHO05D004092 9.2e-36 156.0 645 32.2
Thhalv10024860m.g Eutrema salsugineum HOM05D004189 ORTHO05D004092 5.1e-34 150.2 641 31.4
Sp7g23610 Schrenkiella parvula HOM05D004189 ORTHO05D004092 4.3e-33 147.1 659 32.6
THA.LOC104811978 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 5.6e-33 146.7 620 32.1
BcaC06g32799 Brassica carinata HOM05D004189 ORTHO05D004092 9.5e-33 146.0 642 31.0
BolC7t45929H Brassica oleracea HOM05D004189 ORTHO05D004092 9.5e-33 146.0 648 31.2
AT4G25580 Arabidopsis thaliana HOM05D004189 ORTHO05D004092 2.1e-32 144.8 660 29.2
Carub.0007s1540 Capsella rubella HOM05D004189 ORTHO05D004092 6.2e-32 143.3 643 31.7
BcaB05g21948 Brassica carinata HOM05D000139 ORTHO05D000103 3.4e-30 137.5 73 100.0
AL7G27520 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 5.8e-30 136.7 646 32.0
Aa31LG3G8720 Aethionema arabicum HOM05D004189 ORTHO05D004092 9.9e-30 136.0 711 35.2
CARHR233000 Cardamine hirsuta HOM05D004189 ORTHO05D004092 1.2e-27 129.0 625 29.1
Aa31LG7G12260 Aethionema arabicum HOM05D004189 ORTHO05D004092 4.6e-19 100.5 560 32.9
THA.LOC104800253 Tarenaya hassleriana HOM05D004189 ORTHO05D004092 3.6e-16 90.9 572 30.6
CARHR119590 Cardamine hirsuta HOM05D004189 ORTHO05D004092 6.0e-11 73.6 157 40.8
AL271U10030 Arabidopsis lyrata HOM05D004189 ORTHO05D004092 1.5e-09 68.9 89 49.4
BcaC09g50698 Brassica carinata HOM05D004189 ORTHO05D031907 6.9e-07 60.1 80 46.2
BolC1t02156H Brassica oleracea HOM05D004189 ORTHO05D031907 1.5e-06 58.9 80 45.0
BolC8t48624H Brassica oleracea HOM05D004189 ORTHO05D004092 9.9e-06 56.2 114 35.1


User provided reference genes

Program Settings