Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 0.0e+00 1126.7 614 100.0
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 6.2e-290 1000.3 620 89.5
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 1.4e-289 999.2 618 89.2
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 2.2e-279 965.3 618 86.9
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 1.0e-263 913.3 620 82.9
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 7.5e-243 844.0 616 76.6
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 8.0e-237 823.9 631 72.9
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 5.2e-236 821.2 630 75.4
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 8.3e-234 813.9 618 74.9
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 1.2e-229 800.0 565 73.8
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 1.4e-188 663.7 566 65.7
Aa31LG1G21710 Aethionema arabicum HOM05D004644 ORTHO05D005700 1.3e-175 620.5 460 74.3
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 6.1e-160 568.5 539 56.0
AL6G13290 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 7.7e-147 525.0 368 73.6
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 4.2e-129 466.1 561 50.1
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 4.2e-129 466.1 559 49.7
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 7.2e-129 465.3 573 47.5
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 2.3e-127 460.3 523 49.5
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 2.3e-127 460.3 537 45.1
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 2.3e-127 460.3 532 49.4
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 5.2e-127 459.1 546 46.2
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 6.8e-127 458.8 546 45.8
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 1.5e-126 457.6 546 45.6
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 4.4e-126 456.1 556 46.8
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 7.5e-126 455.3 546 46.0
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 9.7e-126 454.9 551 45.0
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 2.2e-125 453.8 542 51.3
MD12G1109200 Malus domestica HOM05D004644 ORTHO05D005700 6.3e-125 452.2 538 47.6
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 1.1e-124 451.4 547 47.0
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 4.1e-124 449.5 556 47.7
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 4.1e-124 449.5 543 45.5
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 7.0e-124 448.7 533 46.5
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 1.6e-123 447.6 546 45.4
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 2.7e-123 446.8 597 46.4
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 4.5e-123 446.0 549 45.5
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.0e-122 444.9 522 48.1
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 6.5e-122 442.2 561 46.9
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.2e-121 439.9 544 45.2
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 4.2e-121 439.5 590 43.1
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 3.6e-120 436.4 551 47.9
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 2.3e-119 433.7 580 45.3
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 5.2e-119 432.6 558 47.1
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 6.8e-119 432.2 561 43.7
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 8.8e-119 431.8 552 46.9
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 8.8e-119 431.8 524 44.8
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 5.7e-118 429.1 542 45.4
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 4.8e-117 426.0 533 43.5
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 6.3e-117 425.6 557 44.7
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 1.4e-116 424.5 589 40.9
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 1.6e-115 421.0 555 44.1
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 5.9e-115 419.1 545 45.0
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 1.7e-114 417.5 512 44.1
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 2.3e-114 417.2 539 45.6
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 3.8e-114 416.4 552 44.6
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 8.6e-114 415.2 536 43.7
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 1.6e-112 411.0 519 45.1
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 2.1e-112 410.6 551 42.8
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 4.7e-112 409.5 575 44.3
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 6.1e-112 409.1 552 40.8
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 1.8e-111 407.5 583 42.0
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.0e-110 404.1 521 44.1
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 3.7e-109 399.8 546 45.4
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 1.1e-108 398.3 555 45.4
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 9.2e-108 395.2 521 45.1
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 2.0e-107 394.0 512 41.6
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 1.7e-106 391.0 526 43.3
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 2.1e-104 384.0 577 41.6
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 3.6e-104 383.3 586 41.1
HanXRQChr14g0432961 Helianthus annuus HOM05D004644 ORTHO05D005700 8.9e-103 378.6 513 42.5
PSO339G1979 Papaver somniferum HOM05D004644 ORTHO05D005700 1.7e-101 374.4 546 40.3
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 3.7e-101 373.2 529 39.9
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 3.2e-100 370.2 538 44.1
Ca_08912_v3 Cicer arietinum L. HOM05D004644 ORTHO05D005700 3.9e-98 363.2 563 38.9
Cpa.g.sc102.18 Carica papaya HOM05D004644 ORTHO05D005700 8.6e-98 362.1 363 52.6
Nitab4.5_0000578g0020 Nicotiana tabacum HOM05D004644 ORTHO05D005700 9.5e-97 358.6 514 41.1
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 2.1e-96 357.5 538 40.3
Migut.J00643 Erythranthe guttata HOM05D004644 ORTHO05D005700 2.3e-90 337.4 469 45.2
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 5.1e-90 336.3 553 39.1
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 2.3e-87 327.4 400 50.0
MBI18_g00904_MAGBIO Magnolia biondii HOM05D004644 ORTHO05D005700 9.9e-86 322.0 483 38.1
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 2.1e-83 314.3 410 46.8
Peaxi162Scf00722g00210 Petunia axillaris HOM05D004644 ORTHO05D005700 5.1e-82 309.7 495 38.4
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 6.6e-82 309.3 381 49.1
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 9.6e-81 305.4 548 39.6
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 1.2e-80 305.1 552 36.6
Manes.07G133120 Manihot esculenta HOM05D004644 ORTHO05D005700 1.6e-80 304.7 497 38.6
SGA_v2.0_scaffold75G24833 Striga asiatica HOM05D004644 ORTHO05D005700 3.6e-80 303.5 560 38.6
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 8.9e-79 298.9 526 34.2
PGSC0003DMG401003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 2.0e-78 297.7 348 46.6
Cc06_g04370 Coffea canephora HOM05D004644 ORTHO05D005700 3.8e-77 293.5 353 45.6
Zm00001eb393970 Zea mays HOM05D004644 ORTHO05D005700 2.7e-75 287.3 511 37.4
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 3.5e-75 287.0 479 36.1
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 6.6e-74 282.7 510 37.5
Nitab4.5_0004476g0040 Nicotiana tabacum HOM05D004644 ORTHO05D005700 7.3e-73 279.3 464 40.3
PSO801G0701 Papaver somniferum HOM05D004644 ORTHO05D005700 5.3e-71 273.1 343 44.6
Zm00001eb393990 Zea mays HOM05D004644 ORTHO05D005700 1.7e-69 268.1 510 36.7
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 4.8e-64 250.0 602 30.6
CiPaw.09G171100 Carya illinoinensis HOM05D004644 ORTHO05D005700 5.6e-57 226.5 246 49.6
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 4.0e-55 220.3 645 27.6
MD01G1102300 Malus domestica HOM05D004644 ORTHO05D005700 1.7e-53 214.9 302 44.4
Actinidia26658 Actinidia chinensis HOM05D004644 ORTHO05D005700 4.2e-52 210.3 241 47.3
ATR0763G089 Amborella trichopoda HOM05D004644 ORTHO05D005700 1.1e-49 202.2 317 38.2
CDE02G0420 Ceratophyllum demersum HOM05D004644 ORTHO05D005700 1.9e-49 201.4 362 34.0
CSS0030902 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 2.0e-46 191.4 256 42.6
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 9.0e-39 166.0 317 39.1
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 2.2e-37 161.4 150 52.7
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 2.2e-32 144.8 113 53.1
Atru.chr8.1779 Acer truncatum HOM05D004644 ORTHO05D005700 2.8e-32 144.4 122 52.5
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 8.2e-32 142.9 267 34.8
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 9.1e-31 139.4 122 53.3
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 4.5e-30 137.1 118 53.4
Atru.chr8.1778 Acer truncatum HOM05D004644 ORTHO05D005700 2.2e-29 134.8 90 60.0
C01p11360 Brassica napus HOM05D004644 ORTHO05D041344 2.5e-28 131.3 79 84.8
BolC1t01105H Brassica oleracea HOM05D004644 ORTHO05D041344 2.5e-28 131.3 79 84.8
CSS0001913 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 4.2e-28 130.6 117 52.1
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.5e-28 130.2 91 58.2
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 5.5e-28 130.2 111 53.2
AT5G03750 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 9.4e-28 129.4 247 36.8
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 9.4e-28 129.4 94 54.3
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 2.7e-27 127.9 88 58.0
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 3.0e-26 124.4 96 50.0
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 3.0e-26 124.4 101 51.5
Glyma.19G185000 Glycine max HOM05D004644 ORTHO05D005700 1.5e-25 122.1 100 54.0
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 3.7e-24 117.5 116 41.4
Haze_20519 Corylus avellana HOM05D004644 ORTHO05D005700 3.1e-23 114.4 153 45.8
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 1.3e-21 109.0 72 54.2
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 7.2e-20 103.2 92 51.1
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 3.6e-19 100.9 134 36.6
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 3.6e-19 100.9 486 22.2
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.3e-18 98.2 81 48.1
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 2.0e-17 95.1 86 39.5
PGR004G0361 Punica granatum HOM05D004644 ORTHO05D005700 2.0e-17 95.1 94 53.2
Nn2g13824 Nelumbo nucifera HOM05D004644 ORTHO05D005700 2.2e-16 91.7 147 37.4
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 2.2e-16 91.7 96 40.6
PGR004G0952 Punica granatum HOM05D004644 ORTHO05D005700 1.1e-15 89.4 86 54.7
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 7.0e-15 86.7 94 38.3
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 5.9e-14 83.6 66 51.5
Atru.chr8.1774 Acer truncatum HOM05D004644 ORTHO05D005700 1.0e-13 82.8 75 44.0
PSO801G0518 Papaver somniferum HOM05D004644 ORTHO05D005700 1.7e-13 82.0 88 38.6
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.2e-13 81.6 72 45.8
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-12 79.3 110 39.1
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-12 79.3 110 39.1
ATR0763G245 Amborella trichopoda HOM05D004644 ORTHO05D005700 2.5e-12 78.2 62 48.4
FvH4_7g08751 Fragaria vesca HOM05D004644 ORTHO05D005700 1.2e-11 75.9 106 37.7
Sabra10G0175900 Salix brachista HOM05D004644 ORTHO05D005700 3.6e-11 74.3 102 41.2
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.0e-10 72.8 73 45.2
Lj1g0014168 Lotus japonicus HOM05D004644 ORTHO05D007522 5.2e-10 70.5 59 54.2
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.6e-09 68.2 40 62.5
Glyma.07G162100 Glycine max HOM05D003568 ORTHO05D004104 3.4e-09 67.8 66 51.5
Glyma.18G219501 Glycine max HOM05D000076 ORTHO05D005700 3.4e-09 67.8 56 60.7
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.7e-08 64.3 104 31.7
Lj3C988T3 Lonicera japonica HOM05D004644 ORTHO05D005700 1.1e-07 62.8 68 45.6
SEGI_17091 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-07 62.8 196 28.1
ECA232G2196 Erigeron canadensis HOM05D004644 ORTHO05D005700 1.4e-07 62.4 57 45.6


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