Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20123 Brassica carinata HOM05D006562 ORTHO05D008230 0.0e+00 1138.6 583 100.0
BraA09t36658Z Brassica rapa HOM05D006562 ORTHO05D008230 4.5e-274 947.6 609 84.4
BcaC04g23114 Brassica carinata HOM05D006562 ORTHO05D008230 7.5e-269 930.2 597 83.6
Sp2g30560 Schrenkiella parvula HOM05D006562 ORTHO05D008230 1.7e-265 919.1 606 81.2
C09p12020 Brassica napus HOM05D006562 ORTHO05D008230 1.1e-264 916.4 597 82.7
BolC9t54092H Brassica oleracea HOM05D006562 ORTHO05D008230 2.5e-264 915.2 602 82.6
AL8G45460 Arabidopsis lyrata HOM05D006562 ORTHO05D008230 1.4e-259 899.4 582 81.3
Carub.0008s2836 Capsella rubella HOM05D006562 ORTHO05D008230 7.8e-258 893.6 600 79.2
AT5G66130 Arabidopsis thaliana HOM05D006562 ORTHO05D008230 5.1e-257 891.0 593 79.3
Thhalv10003881m.g Eutrema salsugineum HOM05D006562 ORTHO05D008230 5.6e-256 887.5 600 79.7
A09p10140 Brassica napus HOM05D006562 ORTHO05D008230 4.4e-253 877.9 626 78.0
CARHR281620 Cardamine hirsuta HOM05D006562 ORTHO05D008230 4.0e-246 854.7 589 78.6
Aa31LG1G14620 Aethionema arabicum HOM05D006562 ORTHO05D008230 3.4e-205 718.8 506 74.3
Cpa.g.sc6.285 Carica papaya HOM05D006562 ORTHO05D008230 1.1e-171 607.4 635 55.9
Thecc.01G014800 Theobroma cacao HOM05D006562 ORTHO05D008230 3.4e-168 595.9 608 54.6
TWI53G1373 Tripterygium wilfordii HOM05D006562 ORTHO05D008230 5.7e-168 595.1 615 54.1
CiPaw.07G060900 Carya illinoinensis HOM05D006562 ORTHO05D008230 9.8e-168 594.3 613 53.7
Gohir.A10G098700 Gossypium hirsutum HOM05D006562 ORTHO05D008230 3.1e-166 589.3 612 54.4
QL06p051072 Quercus lobata HOM05D006562 ORTHO05D008230 9.2e-166 587.8 622 53.4
COL.COLO4_22460 Corchorus olitorius HOM05D006562 ORTHO05D008230 5.9e-165 585.1 611 53.8
Gohir.D10G089300 Gossypium hirsutum HOM05D006562 ORTHO05D008230 1.0e-164 584.3 612 53.8
Actinidia22955 Actinidia chinensis HOM05D006562 ORTHO05D008230 2.3e-164 583.2 599 53.9
Gorai.011G098200 Gossypium raimondii HOM05D006562 ORTHO05D008230 3.3e-163 579.3 612 53.4
Manes.01G148500 Manihot esculenta HOM05D006562 ORTHO05D008230 7.3e-163 578.2 622 53.5
Cfa007000 Carpinus fangiana HOM05D006562 ORTHO05D008230 2.1e-162 576.6 614 52.1
Atru.chr3.853 Acer truncatum HOM05D006562 ORTHO05D008230 3.6e-162 575.9 642 51.2
MD15G1242700 Malus domestica HOM05D006562 ORTHO05D008230 5.2e-161 572.0 606 53.3
Lj2A480G48 Lonicera japonica HOM05D006562 ORTHO05D008230 1.2e-160 570.9 610 51.8
Potri.005G111000 Populus trichocarpa HOM05D006562 ORTHO05D008230 1.2e-160 570.9 615 52.7
vmacro22151 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 5.7e-160 568.5 618 52.3
vmacro22192 Vaccinium macrocarpon HOM05D006562 ORTHO05D008230 5.7e-160 568.5 618 52.4
Sabra05G0091000 Salix brachista HOM05D006562 ORTHO05D008230 1.3e-159 567.4 627 52.0
Dinv33663 Davidia involucrata HOM05D006562 ORTHO05D008230 1.1e-158 564.3 617 51.9
Haze_03732 Corylus avellana HOM05D006562 ORTHO05D008230 2.4e-158 563.1 650 49.8
FAN28G2818 Fragaria x ananassa HOM05D006562 ORTHO05D008230 5.4e-158 562.0 605 53.1
RcHm_v2.0_Chr2g0099051 Rosa chinensis HOM05D006562 ORTHO05D008230 4.6e-157 558.9 615 52.0
FvH4_1g11470 Fragaria vesca HOM05D006562 ORTHO05D008230 5.9e-157 558.5 613 52.2
FAN23G1005 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.0e-156 556.2 603 52.6
CSS0025685 Camellia sinensis var. sinensis HOM05D006562 ORTHO05D008230 1.5e-155 553.9 616 52.1
FAN19G2077 Fragaria x ananassa HOM05D006562 ORTHO05D008230 4.3e-155 552.4 626 51.4
CANSAT25G3480 Cannabis sativa HOM05D006562 ORTHO05D008230 5.2e-153 545.4 608 51.2
GSVIVG01018736001 Vitis vinifera HOM05D006562 ORTHO05D008230 3.4e-152 542.7 611 51.4
Lj4g0007150 Lotus japonicus HOM05D006562 ORTHO05D008230 4.1e-150 535.8 616 50.2
TAR376G1060 Trochodendron aralioides HOM05D006562 ORTHO05D008230 6.0e-149 531.9 627 50.7
Sed0025600 Sechium edule HOM05D006562 ORTHO05D008230 6.6e-148 528.5 588 50.5
Ciclev10025220m.g Citrus clementina HOM05D006562 ORTHO05D008230 2.1e-146 523.5 598 50.5
MBI05_g23389_MAGBIO Magnolia biondii HOM05D006562 ORTHO05D008230 1.4e-145 520.8 651 47.9
Ca_03628_v3 Cicer arietinum L. HOM05D006562 ORTHO05D008230 6.8e-145 518.5 632 48.6
HanXRQChr15g0483891 Helianthus annuus HOM05D006562 ORTHO05D008230 6.8e-145 518.5 608 48.5
Phvul.003G265000 Phaseolus vulgaris HOM05D006562 ORTHO05D008230 2.6e-144 516.5 568 51.4
TPR.G19508 Trifolium pratense HOM05D006562 ORTHO05D008230 4.4e-144 515.8 600 50.0
Migut.L00910 Erythranthe guttata HOM05D006562 ORTHO05D008230 2.2e-143 513.5 572 49.0
Duzib187G1447 Durio zibethinus HOM05D006562 ORTHO05D008230 1.1e-142 511.1 615 49.4
Sc16g0001970 Simmondsia chinensis HOM05D006562 ORTHO05D008230 1.1e-142 511.1 621 49.3
Medtr8g075250 Medicago truncatula HOM05D006562 ORTHO05D008230 5.4e-142 508.8 608 48.4
VMungo0251G0646 Vigna mungo HOM05D006562 ORTHO05D008230 1.2e-141 507.7 613 50.2
CsaV3_6G047340 Cucumis sativus L. HOM05D006562 ORTHO05D008230 1.6e-141 507.3 612 48.7
arahy.Tifrunner.gnm1.ann1.X2JQ1G Arachis hypogaea HOM05D006562 ORTHO05D008230 2.7e-141 506.5 610 49.7
DCAR_014038 Daucus carota HOM05D006562 ORTHO05D008230 4.6e-141 505.8 530 51.1
Psat4g101960 Pisum sativum HOM05D006562 ORTHO05D008230 6.0e-141 505.4 615 49.6
Lsat_1_v5_gn_3_72080 Lactuca sativa HOM05D006562 ORTHO05D008230 1.0e-140 504.6 609 48.8
Glyma.16G124500 Glycine max HOM05D006562 ORTHO05D008230 1.7e-140 503.8 615 48.9
ClCG01G020460 Citrullus lanatus HOM05D006562 ORTHO05D008230 3.0e-140 503.1 596 49.0
arahy.Tifrunner.gnm1.ann1.6MN492 Arachis hypogaea HOM05D006562 ORTHO05D008230 6.6e-140 501.9 609 48.9
SGA_v2.0_scaffold229G43296 Striga asiatica HOM05D006562 ORTHO05D008230 6.2e-138 495.4 548 49.8
SalBow5G1234 Salvia bowleyana HOM05D006562 ORTHO05D008230 4.0e-137 492.7 628 47.1
AUR62029498 Chenopodium quinoa HOM05D006562 ORTHO05D008230 1.5e-136 490.7 525 51.6
AUR62003339 Chenopodium quinoa HOM05D006562 ORTHO05D008230 2.0e-136 490.3 572 49.8
Lalb_Chr16g0391391 Lupinus albus HOM05D006562 ORTHO05D008230 5.8e-136 488.8 611 49.4
Sopen02g028380 Solanum pennellii HOM05D006562 ORTHO05D008230 7.6e-136 488.4 568 50.0
Cc07_g11050 Coffea canephora HOM05D006562 ORTHO05D008230 2.2e-135 486.9 614 46.4
Prupe.7G171500 Prunus persica HOM05D006562 ORTHO05D008230 3.7e-135 486.1 517 53.4
Eucgr.I02333 Eucalyptus grandis HOM05D006562 ORTHO05D008230 1.9e-134 483.8 614 47.7
Solyc02g083600.4 Solanum lycopersicum HOM05D006562 ORTHO05D008230 1.9e-134 483.8 600 48.2
Oeu048479.1 Olea europaea HOM05D006562 ORTHO05D008230 3.5e-133 479.6 604 46.9
Aqoxy5G01815 Aquilegia oxysepala HOM05D006562 ORTHO05D008230 1.0e-132 478.0 593 48.7
PGR119G1624 Punica granatum HOM05D006562 ORTHO05D008230 8.6e-132 474.9 617 45.9
PGSC0003DMG400003647 Solanum tuberosum HOM05D006562 ORTHO05D008230 1.5e-131 474.2 514 52.1
Nitab4.5_0001892g0110 Nicotiana tabacum HOM05D006562 ORTHO05D008230 1.9e-131 473.8 591 47.5
CAN.G1274.29 Capsicum annuum HOM05D006562 ORTHO05D008230 4.4e-128 462.6 534 48.3
MELO3C007925.2 Cucumis melo HOM05D006562 ORTHO05D008230 1.1e-126 458.0 663 43.6
ECA246G3730 Erigeron canadensis HOM05D006562 ORTHO05D008230 1.1e-126 458.0 553 48.6
EL10Ac6g15524 Beta vulgaris HOM05D006562 ORTHO05D008230 1.4e-126 457.6 653 44.3
PSO170G3776 Papaver somniferum HOM05D006562 ORTHO05D008230 3.2e-126 456.4 624 45.5
Peaxi162Scf00328g00616 Petunia axillaris HOM05D006562 ORTHO05D008230 2.3e-124 450.3 636 44.2
Rhsim10G0209300 Rhododendron simsii HOM05D006562 ORTHO05D008230 2.3e-124 450.3 635 44.4
Nitab4.5_0003187g0030 Nicotiana tabacum HOM05D006562 ORTHO05D008230 2.8e-122 443.4 605 45.0
unitig_37.g12438 Utricularia gibba HOM05D006562 ORTHO05D008230 3.8e-119 433.0 603 44.8
HPP92_022171 Vanilla planifolia HOM05D006562 ORTHO05D008230 3.8e-119 433.0 637 44.1
MSTRG.15581 Avicennia marina HOM05D006562 ORTHO05D008230 1.1e-118 431.4 491 49.3
PSO700G0294 Papaver somniferum HOM05D006562 ORTHO05D008230 2.4e-118 430.3 637 43.0
Ah.03g149120 Amaranthus hybridus HOM05D006562 ORTHO05D008230 5.4e-118 429.1 632 43.7
Os03g0242100 Oryza sativa ssp. japonica HOM05D006562 ORTHO05D008230 4.3e-115 419.5 587 42.9
ATR0712G114 Amborella trichopoda HOM05D006562 ORTHO05D008230 1.3e-114 417.9 519 48.2
SHI08537 Sapria himalayana HOM05D006562 ORTHO05D008230 1.8e-113 414.1 411 53.3
Hund16502 Selenicereus undatus HOM05D006562 ORTHO05D008230 1.8e-113 414.1 432 53.2
Zm00001eb398900 Zea mays HOM05D006562 ORTHO05D008230 5.8e-104 382.5 529 41.8
HPP92_022170 Vanilla planifolia HOM05D006562 ORTHO05D008230 2.5e-86 323.9 454 46.0
SMO329G0081 Selaginella moellendorffii HOM05D006562 ORTHO05D008230 6.3e-82 309.3 529 37.4
Pp3c8_14180 Physcomitrium patens HOM05D006562 ORTHO05D008230 1.6e-77 294.7 478 38.7
CDE02G3565 Ceratophyllum demersum HOM05D006562 ORTHO05D008230 4.1e-73 280.0 549 35.9
Mapoly0004s0213 Marchantia polymorpha HOM05D006562 ORTHO05D008230 5.0e-71 273.1 516 35.7
FAN26G2549 Fragaria x ananassa HOM05D006562 ORTHO05D008230 3.4e-51 207.2 195 54.4
SEGI_24182 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 9.8e-51 205.7 318 41.5
Dinv33664 Davidia involucrata HOM05D006562 ORTHO05D008230 2.2e-50 204.5 300 46.0
Hma1.2p1_0315F.1_g122300 Hydrangea macrophylla HOM05D006562 ORTHO05D008230 3.6e-45 187.2 189 54.0
MCO01G428 Micromonas commoda HOM05D006562 ORTHO05D008230 1.1e-38 165.6 574 26.7
PRCOL_00000425 Prasinoderma coloniale HOM05D006562 ORTHO05D008230 1.7e-31 141.7 447 27.7
Cre03.g196600 Chlamydomonas reinhardtii HOM05D006562 ORTHO05D008230 3.5e-24 117.5 579 22.8
CBR_g51010 Chara braunii HOM05D006562 ORTHO05D008230 4.6e-24 117.1 356 29.2
Lsat_1_v5_gn_5_17820 Lactuca sativa HOM05D002511 ORTHO05D019442 3.9e-15 87.4 120 43.3
Hund31353 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.1e-15 87.0 121 45.5
Hund31354 Selenicereus undatus HOM05D006562 ORTHO05D008230 5.1e-15 87.0 121 45.5
Hund31048 Selenicereus undatus HOM05D006562 ORTHO05D008230 7.3e-14 83.2 130 43.8
Hund31049 Selenicereus undatus HOM05D006562 ORTHO05D008230 7.3e-14 83.2 130 43.8
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 1.4e-12 79.0 275 26.5
Carub.0002s2451 Capsella rubella HOM05D004094 ORTHO05D004601 9.0e-12 76.3 301 26.9
AL142U10030 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 7.6e-11 73.2 286 26.6
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 7.6e-11 73.2 286 26.6
Sopen10g019740 Solanum pennellii HOM05D006562 ORTHO05D008230 7.6e-11 73.2 73 56.2
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 6.4e-10 70.1 272 25.4
AT1G77620 Arabidopsis thaliana HOM05D004094 ORTHO05D004601 8.4e-10 69.7 283 25.4
BraA07t31822Z Brassica rapa HOM05D004094 ORTHO05D004601 1.4e-09 68.9 302 25.2
BcaC08g47600 Brassica carinata HOM05D004094 ORTHO05D004601 4.2e-09 67.4 294 23.5
C06p51630 Brassica napus HOM05D004094 ORTHO05D004601 4.2e-09 67.4 294 23.5
SEGI_14672 Sequoiadendron giganteum HOM05D006562 ORTHO05D008230 4.2e-09 67.4 116 34.5
Cre12.g521200 Chlamydomonas reinhardtii HOM05D004977 ORTHO05D006454 7.1e-09 66.6 260 26.2
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 7.1e-09 66.6 282 25.2
BolC6t40183H Brassica oleracea HOM05D004094 ORTHO05D004601 9.3e-09 66.2 274 24.5
Thhalv10018028m.g Eutrema salsugineum HOM05D004094 ORTHO05D004601 2.1e-08 65.1 282 25.2
Aa31LG4G7730 Aethionema arabicum HOM05D004094 ORTHO05D004601 6.0e-08 63.5 282 24.8
Solyc07g005880.3 Solanum lycopersicum HOM05D004977 ORTHO05D006454 1.0e-07 62.8 256 23.0
Sopen07g001990 Solanum pennellii HOM05D004977 ORTHO05D006454 1.0e-07 62.8 256 23.0
CAN.G160.14 Capsicum annuum HOM05D004977 ORTHO05D006454 1.3e-07 62.4 256 22.7
HanXRQChr16g0525891 Helianthus annuus HOM05D004977 ORTHO05D006454 1.7e-07 62.0 265 23.0
Migut.C01109 Erythranthe guttata HOM05D001470 ORTHO05D006756 3.0e-07 61.2 244 26.2
Aa31LG1G13410 Aethionema arabicum HOM05D004977 ORTHO05D006454 6.6e-07 60.1 256 23.8
Nitab4.5_0002611g0110 Nicotiana tabacum HOM05D004977 ORTHO05D006454 8.7e-07 59.7 324 23.5
Nitab4.5_0003551g0050 Nicotiana tabacum HOM05D004977 ORTHO05D006454 1.5e-06 58.9 324 23.1
Medtr3g088120 Medicago truncatula HOM05D001470 ORTHO05D006756 1.9e-06 58.5 252 25.4
FAN25G0235 Fragaria x ananassa HOM05D004977 ORTHO05D006454 3.3e-06 57.8 254 24.4
Lsat_1_v5_gn_5_12680 Lactuca sativa HOM05D004664 ORTHO05D005526 4.3e-06 57.4 68 51.5
BcaB05g25063 Brassica carinata HOM05D004094 ORTHO05D004601 5.6e-06 57.0 280 23.6
FAN21G3176 Fragaria x ananassa HOM05D004977 ORTHO05D006454 5.6e-06 57.0 306 23.2
BcaC03g15753 Brassica carinata HOM05D004094 ORTHO05D004601 9.6e-06 56.2 386 24.4
FvH4_3g28250 Fragaria vesca HOM05D004977 ORTHO05D006454 9.6e-06 56.2 254 24.0
FAN11G1922 Fragaria x ananassa HOM05D004977 ORTHO05D006454 9.6e-06 56.2 254 24.0
Pp3c22_21030 Physcomitrium patens HOM05D004977 ORTHO05D006454 9.6e-06 56.2 344 21.5


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