Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 6.8e-157 557.4 299 100.0
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 1.9e-143 512.7 304 87.5
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 5.2e-141 504.6 306 85.9
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 1.2e-140 503.4 306 85.6
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 1.7e-139 499.6 305 86.2
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 8.1e-134 480.7 313 82.1
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 1.4e-133 479.9 315 81.3
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 4.9e-131 471.5 307 81.1
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 1.4e-130 469.9 309 81.2
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 1.6e-126 456.4 308 80.2
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 8.1e-126 454.1 309 79.3
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 1.3e-123 446.8 309 78.3
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 6.6e-120 434.5 309 75.4
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 1.9e-111 406.4 315 69.5
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 3.4e-100 369.0 309 65.0
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 7.6e-100 367.9 252 74.2
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 1.4e-98 363.6 313 64.2
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 2.1e-97 359.8 233 82.4
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 1.8e-96 356.7 324 62.7
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 5.1e-96 355.1 322 62.7
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 5.1e-96 355.1 247 73.3
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 1.9e-95 353.2 249 73.9
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 9.7e-95 350.9 305 63.0
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 1.3e-94 350.5 255 71.0
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 1.3e-94 350.5 309 63.4
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 2.8e-94 349.4 264 69.3
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 3.7e-94 349.0 224 79.0
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 3.7e-94 349.0 255 70.6
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 4.8e-94 348.6 297 65.3
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 6.3e-94 348.2 264 68.9
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 6.3e-94 348.2 268 67.9
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 8.2e-94 347.8 256 69.5
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 1.1e-93 347.4 251 70.1
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 1.1e-93 347.4 250 69.6
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 1.4e-93 347.1 247 72.1
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 1.4e-93 347.1 242 74.4
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 1.8e-93 346.7 247 72.1
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 1.8e-93 346.7 232 72.8
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 5.3e-93 345.1 269 69.9
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 5.3e-93 345.1 250 72.0
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 9.0e-93 344.4 296 64.9
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 1.5e-92 343.6 235 74.5
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 1.7e-91 340.1 243 72.4
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 1.7e-91 340.1 236 74.6
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 2.2e-91 339.7 308 65.9
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 3.8e-91 339.0 241 71.8
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 3.8e-91 339.0 230 71.3
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 3.8e-91 339.0 297 59.3
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 8.5e-91 337.8 236 71.2
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 8.5e-91 337.8 267 67.0
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 1.1e-90 337.4 228 71.9
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 2.5e-90 336.3 236 69.5
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 3.2e-90 335.9 240 70.8
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 7.2e-90 334.7 245 69.4
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 7.2e-90 334.7 257 66.5
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 1.2e-89 334.0 227 74.0
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 2.1e-89 333.2 234 70.5
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 3.6e-89 332.4 243 70.0
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 7.9e-89 331.3 229 71.2
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 1.0e-88 330.9 277 62.5
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 1.0e-88 330.9 246 68.3
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 1.4e-88 330.5 236 68.6
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 1.8e-88 330.1 243 68.7
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 1.8e-88 330.1 226 72.1
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 1.8e-88 330.1 224 74.1
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.3e-88 329.7 230 70.9
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 5.1e-88 328.6 242 69.4
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 6.7e-88 328.2 250 66.0
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 8.8e-88 327.8 233 76.8
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 8.8e-88 327.8 322 61.5
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 8.8e-88 327.8 231 71.4
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 1.1e-87 327.4 243 68.3
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 1.1e-87 327.4 230 70.4
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 1.5e-87 327.0 227 73.6
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 2.5e-87 326.2 236 69.9
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 3.3e-87 325.9 241 72.6
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 7.4e-87 324.7 249 67.1
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 1.3e-86 323.9 249 67.9
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 2.2e-86 323.2 232 70.3
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 2.2e-86 323.2 243 68.7
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 2.2e-86 323.2 269 64.3
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 2.8e-86 322.8 233 76.4
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 3.7e-86 322.4 237 70.0
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 6.3e-86 321.6 270 63.7
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 6.3e-86 321.6 237 69.6
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 1.1e-85 320.9 247 66.0
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 2.4e-85 319.7 228 72.4
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 3.1e-85 319.3 245 67.3
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 3.1e-85 319.3 237 68.8
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 6.9e-85 318.2 243 67.9
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 5.0e-83 312.0 247 68.0
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 1.4e-82 310.5 252 62.3
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 3.6e-81 305.8 237 66.7
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.0e-80 304.3 233 63.5
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 2.3e-80 303.1 265 66.0
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 5.1e-80 302.0 212 75.9
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 5.1e-80 302.0 212 75.9
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 2.0e-79 300.1 219 71.2
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 9.7e-79 297.7 262 59.9
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 5.9e-76 288.5 231 62.8
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 1.7e-75 287.0 221 67.4
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 1.7e-75 287.0 252 61.9
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 5.0e-75 285.4 234 60.7
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 8.5e-75 284.6 236 60.2
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 5.5e-74 282.0 202 68.3
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 6.1e-73 278.5 219 65.8
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 8.2e-70 268.1 250 55.6
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 1.1e-69 267.7 263 55.1
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 1.8e-69 266.9 313 48.9
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 2.1e-65 253.4 225 56.4
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 4.7e-65 252.3 248 54.8
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 6.7e-64 248.4 234 56.0
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 8.8e-64 248.1 213 59.6
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 4.8e-62 242.3 215 64.2
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 4.8e-62 242.3 213 59.2
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 2.2e-59 233.4 215 54.0
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 1.9e-58 230.3 185 68.1
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 4.7e-57 225.7 171 69.0
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 3.1e-53 213.0 168 64.3
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.0e-51 208.0 171 62.6
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.7e-51 207.2 216 53.2
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 7.0e-45 185.3 153 69.3
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 5.6e-34 149.1 122 63.9
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 8.0e-33 145.2 220 40.5
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 3.1e-32 143.3 233 39.5
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 4.4e-31 139.4 190 45.8
BolC1t02230H Brassica oleracea HOM05D005740 ORTHO05D007085 1.1e-24 118.2 70 84.3
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 3.1e-24 116.7 222 29.7
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 9.2e-21 105.1 70 68.6
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 3.6e-17 93.2 86 53.5
C01p22960 Brassica napus HOM05D017401 ORTHO05D020044 1.1e-16 91.7 112 55.4
C01p22940 Brassica napus HOM05D005740 ORTHO05D007085 5.2e-16 89.4 49 85.7
Sabra12G0002000 Salix brachista HOM05D000053 ORTHO05D000035 8.4e-14 82.0 81 58.0
Sabra12G0002700 Salix brachista HOM05D005740 ORTHO05D000035 2.4e-13 80.5 77 58.4
MBI08_g17822_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 1.2e-12 78.2 52 71.2
Sabra12G0007800 Salix brachista HOM05D000053 ORTHO05D000035 1.1e-10 71.6 48 72.9
Sabra12G0002200 Salix brachista HOM05D005740 ORTHO05D007085 5.6e-10 69.3 70 57.1
Sabra12G0002900 Salix brachista HOM05D005740 ORTHO05D007085 2.8e-09 67.0 45 73.3
Pp3c3_26240 Physcomitrium patens HOM05D005740 ORTHO05D007085 1.7e-06 57.8 63 46.0


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