Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g17217 Brassica carinata HOM05D000082 ORTHO05D094872 1.3e-45 186.0 93 100.0
BcaB01g01001 Brassica carinata HOM05D000082 ORTHO05D001639 4.0e-31 137.9 84 85.7
BcaC01g01902 Brassica carinata HOM05D000082 ORTHO05D001639 2.0e-22 109.0 84 76.2
C03p70780 Brassica napus HOM05D000082 ORTHO05D001639 2.0e-22 109.0 84 76.2
BolC3t19350H Brassica oleracea HOM05D000082 ORTHO05D001639 2.0e-22 109.0 84 76.2
Sp5g15060 Schrenkiella parvula HOM05D000082 ORTHO05D001639 5.8e-22 107.5 87 67.8
BcaB02g11407 Brassica carinata HOM05D000082 ORTHO05D091588 1.3e-21 106.3 56 91.1
A06p20860 Brassica napus HOM05D000082 ORTHO05D001639 1.3e-21 106.3 84 71.4
Thhalv10002566m.g Eutrema salsugineum HOM05D000082 ORTHO05D001639 1.4e-20 102.8 86 68.6
CARHR155190 Cardamine hirsuta HOM05D000082 ORTHO05D001639 9.6e-17 90.1 92 64.1
Aa31LG4G15630 Aethionema arabicum HOM05D000082 ORTHO05D001639 1.8e-15 85.9 73 64.4
Carub.0005s1289 Capsella rubella HOM05D000082 ORTHO05D001639 3.4e-14 81.6 99 61.6
AL5G25510 Arabidopsis lyrata HOM05D000082 ORTHO05D001639 2.9e-13 78.6 95 60.0
AT3G46620 Arabidopsis thaliana HOM05D000082 ORTHO05D001639 4.9e-13 77.8 98 57.1
Sp6g21250 Schrenkiella parvula HOM05D000082 ORTHO05D001639 1.9e-12 75.9 86 52.3
BraA06t25165Z Brassica rapa HOM05D000082 ORTHO05D001639 1.2e-11 73.2 60 65.0
AL8G36040 Arabidopsis lyrata HOM05D000082 ORTHO05D001639 1.6e-11 72.8 87 51.7
BcaC03g14003 Brassica carinata HOM05D000082 ORTHO05D001639 4.6e-11 71.2 75 52.0
C02p12420 Brassica napus HOM05D000082 ORTHO05D001639 4.6e-11 71.2 75 52.0
BolC2t07342H Brassica oleracea HOM05D000082 ORTHO05D001639 7.8e-11 70.5 75 52.0
THA.LOC104799436 Tarenaya hassleriana HOM05D000082 ORTHO05D001639 1.0e-10 70.1 78 52.6
Aa31LG1G11900 Aethionema arabicum HOM05D000082 ORTHO05D001639 1.7e-10 69.3 85 48.2
Thhalv10013762m.g Eutrema salsugineum HOM05D000082 ORTHO05D001639 1.7e-10 69.3 74 54.1
A02p07070 Brassica napus HOM05D000082 ORTHO05D001639 2.3e-10 68.9 75 50.7
BraA02t05787Z Brassica rapa HOM05D000082 ORTHO05D001639 2.3e-10 68.9 75 50.7
AT5G59550 Arabidopsis thaliana HOM05D000082 ORTHO05D001639 8.7e-10 67.0 70 51.4
BcaC04g19761 Brassica carinata HOM05D000082 ORTHO05D001639 8.7e-10 67.0 87 47.1
C09p51930 Brassica napus HOM05D000082 ORTHO05D001639 8.7e-10 67.0 87 47.1
BolC9t58056H Brassica oleracea HOM05D000082 ORTHO05D001639 8.7e-10 67.0 87 47.1
BcaB05g22519 Brassica carinata HOM05D000082 ORTHO05D001639 7.3e-09 63.9 75 49.3
BraA10t43755Z Brassica rapa HOM05D000082 ORTHO05D001639 1.3e-08 63.2 83 43.4
A10p16740 Brassica napus HOM05D000082 ORTHO05D001639 1.6e-08 62.8 83 45.8
BcaB01g04568 Brassica carinata HOM05D000082 ORTHO05D001639 8.1e-08 60.5 82 42.7
BcaB08g36249 Brassica carinata HOM05D000082 ORTHO05D001639 1.5e-06 56.2 71 43.7
BcaC01g06514 Brassica carinata HOM05D000082 ORTHO05D001639 2.6e-06 55.5 51 54.9
Gohir.A03G044600 Gossypium hirsutum HOM05D000082 ORTHO05D001639 9.9e-06 53.5 69 40.6
THA.LOC104814882 Tarenaya hassleriana HOM05D000082 ORTHO05D001639 9.9e-06 53.5 84 44.0


User provided reference genes

Program Settings