Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15202 Brassica carinata HOM05D003724 ORTHO05D004367 7.3e-195 683.7 345 100.0
A07p33960 Brassica napus HOM05D003724 ORTHO05D004367 2.5e-179 632.1 333 95.5
BraA07t31023Z Brassica rapa HOM05D003724 ORTHO05D004367 2.1e-178 629.0 333 95.2
BolC6t39148H Brassica oleracea HOM05D003724 ORTHO05D004367 1.8e-177 625.9 333 94.6
C06p42900 Brassica napus HOM05D003724 ORTHO05D004367 4.0e-177 624.8 333 94.6
BcaC08g46167 Brassica carinata HOM05D003724 ORTHO05D004367 4.4e-176 621.3 333 94.3
Sp5g22320 Schrenkiella parvula HOM05D003724 ORTHO05D004367 3.1e-169 598.6 334 89.5
Thhalv10018311m.g Eutrema salsugineum HOM05D003724 ORTHO05D004367 4.4e-168 594.7 333 88.9
AL2G25920 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 7.1e-166 587.4 334 88.0
CARHR059910 Cardamine hirsuta HOM05D003724 ORTHO05D004367 4.6e-165 584.7 334 87.4
Aa31sc377G30 Aethionema arabicum HOM05D003724 ORTHO05D004367 7.3e-163 577.4 336 85.7
AT1G67370 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 4.4e-160 568.2 334 85.9
THA.LOC104825509 Tarenaya hassleriana HOM05D003724 ORTHO05D004367 7.8e-157 557.4 336 83.6
Gohir.A03G126400 Gossypium hirsutum HOM05D003724 ORTHO05D004367 8.4e-143 510.8 337 76.3
CANSAT01G0850 Cannabis sativa HOM05D003724 ORTHO05D004367 1.9e-142 509.6 336 77.4
Migut.C00176 Erythranthe guttata HOM05D003724 ORTHO05D004367 3.2e-142 508.8 337 76.0
Thecc.02G209200 Theobroma cacao HOM05D003724 ORTHO05D004367 4.2e-142 508.4 337 76.9
Gorai.005G167400 Gossypium raimondii HOM05D003724 ORTHO05D004367 5.5e-142 508.1 337 76.0
Dinv10959 Davidia involucrata HOM05D003724 ORTHO05D004367 9.3e-142 507.3 337 75.1
FvH4_4g23800 Fragaria vesca HOM05D003724 ORTHO05D004367 3.9e-140 501.9 346 73.7
FAN22G0779 Fragaria x ananassa HOM05D003724 ORTHO05D004367 6.7e-140 501.1 346 74.0
RcHm_v2.0_Chr4g0430341 Rosa chinensis HOM05D003724 ORTHO05D004367 8.7e-140 500.7 346 73.4
Lj3C1068T3 Lonicera japonica HOM05D003724 ORTHO05D004367 1.1e-139 500.4 337 74.2
Actinidia30650 Actinidia chinensis HOM05D003724 ORTHO05D004367 4.3e-139 498.4 335 75.5
Cpa.g.sc43.54 Carica papaya HOM05D003724 ORTHO05D004367 7.4e-139 497.7 346 72.8
TWI75G0323 Tripterygium wilfordii HOM05D003724 ORTHO05D004367 7.4e-139 497.7 337 73.3
MD16G1118900 Malus domestica HOM05D003724 ORTHO05D004367 4.8e-138 495.0 345 73.3
Manes.12G011600 Manihot esculenta HOM05D003724 ORTHO05D004367 4.8e-138 495.0 335 74.3
CsaV3_2G025450 Cucumis sativus L. HOM05D003724 ORTHO05D004367 8.1e-138 494.2 339 75.2
TAR374G1082 Trochodendron aralioides HOM05D003724 ORTHO05D004367 8.1e-138 494.2 336 73.8
RcHm_v2.0_Chr4g0430291 Rosa chinensis HOM05D003724 ORTHO05D004367 1.1e-137 493.8 347 73.2
Potri.003G173200 Populus trichocarpa HOM05D003724 ORTHO05D004367 3.1e-137 492.3 337 74.8
Medtr3g085380 Medicago truncatula HOM05D003724 ORTHO05D004367 4.0e-137 491.9 339 73.2
MELO3C010743.2 Cucumis melo HOM05D003724 ORTHO05D004367 6.9e-137 491.1 337 75.4
TPR.G28283 Trifolium pratense HOM05D003724 ORTHO05D004367 1.2e-136 490.3 334 73.7
Actinidia08073 Actinidia chinensis HOM05D003724 ORTHO05D004367 1.5e-136 490.0 337 74.5
Sed0021729 Sechium edule HOM05D003724 ORTHO05D004367 2.0e-136 489.6 337 74.5
Carub.0002s1366 Capsella rubella HOM05D003724 ORTHO05D004367 3.4e-136 488.8 284 85.9
arahy.Tifrunner.gnm1.ann1.3XH1N1 Arachis hypogaea HOM05D003724 ORTHO05D004367 1.3e-135 486.9 337 73.0
Glyma.18G006800 Glycine max HOM05D003724 ORTHO05D004367 1.3e-135 486.9 337 72.4
VMungo1383G3407 Vigna mungo HOM05D003724 ORTHO05D004367 1.3e-135 486.9 343 71.4
Lj1g0008936 Lotus japonicus HOM05D003724 ORTHO05D004367 2.2e-135 486.1 337 73.6
PGR102G1478 Punica granatum HOM05D003724 ORTHO05D004367 2.9e-135 485.7 334 74.9
FAN17G0970 Fragaria x ananassa HOM05D003724 ORTHO05D004367 3.8e-135 485.3 375 68.3
CAN.G804.4 Capsicum annuum HOM05D003724 ORTHO05D004367 6.5e-135 484.6 337 74.2
Lj1g0003468 Lotus japonicus HOM05D003724 ORTHO05D004367 6.5e-135 484.6 336 72.9
Atru.chr11.2319 Acer truncatum HOM05D003724 ORTHO05D004367 8.4e-135 484.2 337 72.7
PSO782G1352 Papaver somniferum HOM05D003724 ORTHO05D004367 9.3e-134 480.7 339 72.0
Migut.K00732 Erythranthe guttata HOM05D003724 ORTHO05D004367 1.2e-133 480.3 338 72.8
Solyc04g007330.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 3.5e-133 478.8 335 73.4
Nitab4.5_0003981g0060 Nicotiana tabacum HOM05D003724 ORTHO05D004367 6.0e-133 478.0 343 71.4
PSO478G5007 Papaver somniferum HOM05D003724 ORTHO05D004367 6.0e-133 478.0 341 72.7
QL03p052803 Quercus lobata HOM05D003724 ORTHO05D004367 7.9e-133 477.6 336 72.0
Psat5g096280 Pisum sativum HOM05D003724 ORTHO05D004367 1.0e-132 477.2 337 71.8
SalBow2G1610 Salvia bowleyana HOM05D003724 ORTHO05D004367 1.0e-132 477.2 337 73.0
PSO478G4090 Papaver somniferum HOM05D003724 ORTHO05D004367 1.3e-132 476.9 341 71.6
PSO782G3500 Papaver somniferum HOM05D003724 ORTHO05D004367 1.8e-132 476.5 341 72.1
PSO339G4917 Papaver somniferum HOM05D003724 ORTHO05D004367 6.7e-132 474.6 341 71.8
CiPaw.05G110100 Carya illinoinensis HOM05D003724 ORTHO05D004367 8.7e-132 474.2 338 72.2
Lsat_1_v5_gn_8_147680 Lactuca sativa HOM05D003724 ORTHO05D004367 1.1e-131 473.8 335 71.6
PSO384G3745 Papaver somniferum HOM05D003724 ORTHO05D004367 4.3e-131 471.9 339 72.9
Lalb_Chr03g0034531 Lupinus albus HOM05D003724 ORTHO05D004367 7.4e-131 471.1 336 70.8
MD13G1118700 Malus domestica HOM05D003724 ORTHO05D004367 7.4e-131 471.1 347 71.5
HanXRQChr08g0207781 Helianthus annuus HOM05D003724 ORTHO05D004367 1.3e-130 470.3 337 72.4
Aqoxy5G02771 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 4.8e-130 468.4 339 72.0
Prupe.1G226200 Prunus persica HOM05D003724 ORTHO05D004367 6.3e-130 468.0 345 70.4
ECA233G0767 Erigeron canadensis HOM05D003724 ORTHO05D004367 1.4e-129 466.8 337 70.9
Rhsim12G0026000 Rhododendron simsii HOM05D003724 ORTHO05D004367 1.2e-128 463.8 326 72.4
Sopen04g002390 Solanum pennellii HOM05D003724 ORTHO05D004367 1.5e-128 463.4 337 71.5
Lalb_Chr01g0009271 Lupinus albus HOM05D003724 ORTHO05D004367 2.0e-128 463.0 337 70.9
Oeu036873.1 Olea europaea HOM05D003724 ORTHO05D004367 2.0e-128 463.0 338 72.2
Aqoxy7G01914 Aquilegia oxysepala HOM05D003724 ORTHO05D004367 3.8e-127 458.8 339 71.4
CSS0039632 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 5.0e-127 458.4 319 73.0
SGA_v2.0_scaffold9G04687 Striga asiatica HOM05D003724 ORTHO05D004367 6.5e-127 458.0 319 73.0
TAR622G1117 Trochodendron aralioides HOM05D003724 ORTHO05D004367 4.2e-126 455.3 361 67.6
Potri.001G055201 Populus trichocarpa HOM05D003724 ORTHO05D004367 5.5e-126 454.9 336 69.9
vmacro01062 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 5.5e-126 454.9 336 69.9
Oeu060814.1 Olea europaea HOM05D003724 ORTHO05D004367 9.3e-126 454.1 337 71.5
Hund06087 Selenicereus undatus HOM05D003724 ORTHO05D004367 3.6e-125 452.2 374 63.6
Gohir.D02G149500 Gossypium hirsutum HOM05D003724 ORTHO05D004367 3.0e-124 449.1 337 70.6
Ca_16461_v3 Cicer arietinum L. HOM05D003724 ORTHO05D004367 5.1e-124 448.4 337 69.4
Haze_12416 Corylus avellana HOM05D003724 ORTHO05D004367 6.7e-124 448.0 338 69.8
Nn3g16465 Nelumbo nucifera HOM05D003724 ORTHO05D004367 4.3e-123 445.3 338 69.8
Nitab4.5_0002441g0080 Nicotiana tabacum HOM05D003724 ORTHO05D004367 7.4e-123 444.5 336 68.8
Peaxi162Scf00128g01233 Petunia axillaris HOM05D003724 ORTHO05D004367 2.2e-122 443.0 349 66.5
CDE05G2922 Ceratophyllum demersum HOM05D003724 ORTHO05D004367 4.8e-122 441.8 334 66.8
C06p38720 Brassica napus HOM05D003724 ORTHO05D004367 1.1e-121 440.7 342 70.5
Sabra03G0126700 Salix brachista HOM05D003724 ORTHO05D004367 5.3e-121 438.3 337 68.0
HPP92_003196 Vanilla planifolia HOM05D003724 ORTHO05D004367 6.9e-121 438.0 337 67.1
ATR0561G244 Amborella trichopoda HOM05D003724 ORTHO05D004367 2.6e-120 436.0 349 65.6
Os09g0506800 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 8.5e-119 431.0 335 66.0
Zm00001eb102420 Zea mays HOM05D003724 ORTHO05D004367 5.5e-118 428.3 334 66.2
Sabra01G0039800 Salix brachista HOM05D003724 ORTHO05D004367 9.7e-115 417.5 367 61.9
AUR62021613 Chenopodium quinoa HOM05D003724 ORTHO05D004367 2.2e-114 416.4 339 63.4
ClCG08G017130 Citrullus lanatus HOM05D003724 ORTHO05D004367 2.0e-112 409.8 319 67.4
EL10Ac6g13492 Beta vulgaris HOM05D003724 ORTHO05D004367 6.5e-111 404.8 335 62.7
AUR62008480 Chenopodium quinoa HOM05D003724 ORTHO05D004367 2.5e-110 402.9 355 60.3
arahy.Tifrunner.gnm1.ann1.QLFJ9Y Arachis hypogaea HOM05D003724 ORTHO05D004367 2.1e-109 399.8 337 63.8
Ciclev10033677m.g Citrus clementina HOM05D003724 ORTHO05D004367 1.0e-108 397.5 315 67.0
CARHR058050 Cardamine hirsuta HOM05D003724 ORTHO05D004367 2.8e-106 389.4 276 74.6
Sc04g0010100 Simmondsia chinensis HOM05D003724 ORTHO05D004367 2.8e-106 389.4 286 68.2
PGSC0003DMG400029108 Solanum tuberosum HOM05D003724 ORTHO05D004367 3.7e-106 389.0 286 70.3
MBI06_g46773_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 1.0e-103 380.9 317 61.8
Nitab4.5_0003884g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 6.5e-103 378.3 315 64.4
PSO339G0549 Papaver somniferum HOM05D003724 ORTHO05D004367 2.5e-102 376.3 266 71.8
CSS0007637 Camellia sinensis var. sinensis HOM05D003724 ORTHO05D004367 4.2e-102 375.6 307 65.5
AL1G56910 Arabidopsis lyrata HOM05D003724 ORTHO05D004367 5.2e-100 368.6 340 64.1
Ah.01g020690 Amaranthus hybridus HOM05D003724 ORTHO05D004367 4.4e-99 365.5 337 57.6
Nitab4.5_0002699g0070 Nicotiana tabacum HOM05D003724 ORTHO05D004367 2.5e-94 349.7 311 60.8
Sed0012468 Sechium edule HOM05D003724 ORTHO05D004367 1.8e-92 343.6 286 63.6
GSVIVG01010479001 Vitis vinifera HOM05D003724 ORTHO05D004367 1.4e-89 334.0 250 69.2
Cc09_g04930 Coffea canephora HOM05D003724 ORTHO05D004367 1.8e-89 333.6 272 66.2
AagrBONN_evm.TU.Sc2ySwM_368.2626 Anthoceros agrestis HOM05D003724 ORTHO05D004367 7.0e-89 331.6 361 51.8
FAN12G2603 Fragaria x ananassa HOM05D003724 ORTHO05D004367 1.9e-86 323.6 337 56.4
MBI06_g20299_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 8.0e-85 318.2 355 51.8
RcHm_v2.0_Chr4g0430321 Rosa chinensis HOM05D003724 ORTHO05D004367 5.2e-84 315.5 248 65.7
DCAR_026466 Daucus carota HOM05D003724 ORTHO05D004367 2.7e-80 303.1 194 78.4
PSO339G0625 Papaver somniferum HOM05D003724 ORTHO05D004367 5.2e-76 288.9 362 48.1
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 2.0e-75 287.0 339 53.1
CBR_g17956 Chara braunii HOM05D003724 ORTHO05D004367 1.7e-74 283.9 387 46.3
MBI06_g32743_MAGBIO Magnolia biondii HOM05D003724 ORTHO05D004367 4.9e-74 282.3 323 51.7
Mapoly0003s0194 Marchantia polymorpha HOM05D003724 ORTHO05D004367 4.9e-74 282.3 344 48.8
SHI17968 Sapria himalayana HOM05D003724 ORTHO05D004367 4.6e-72 275.8 236 61.0
Glyma.11G250400 Glycine max HOM05D003724 ORTHO05D004367 5.9e-72 275.4 237 59.9
SMO116G0148 Selaginella moellendorffii HOM05D003724 ORTHO05D004367 2.5e-70 270.0 223 60.5
unitig_8.g3138 Utricularia gibba HOM05D003724 ORTHO05D004367 1.3e-63 247.7 243 55.6
Os12g0606600 Oryza sativa ssp. japonica HOM05D003724 ORTHO05D004367 1.5e-51 207.6 264 47.3
Solyc05g015370.3 Solanum lycopersicum HOM05D003724 ORTHO05D004367 3.4e-51 206.5 215 57.2
FAN24G3534 Fragaria x ananassa HOM05D003724 ORTHO05D004367 4.4e-51 206.1 225 52.4
PSO170G4962 Papaver somniferum HOM05D003724 ORTHO05D004367 8.4e-50 201.8 187 57.2
Sopen05g010640 Solanum pennellii HOM05D003724 ORTHO05D004367 3.1e-44 183.3 104 83.7
PSO832G0175 Papaver somniferum HOM05D003724 ORTHO05D004367 4.0e-44 183.0 128 72.7
Pp3c5_4780 Physcomitrium patens HOM05D003724 ORTHO05D004367 2.2e-42 177.2 436 33.5
COL.COLO4_20397 Corchorus olitorius HOM05D003724 ORTHO05D004367 3.2e-41 173.3 144 66.0
Cre10.g452550 Chlamydomonas reinhardtii HOM05D003724 ORTHO05D004367 2.7e-40 170.2 264 41.7
COL.COLO4_20398 Corchorus olitorius HOM05D003724 ORTHO05D004367 1.1e-36 158.3 126 66.7
Solyc05g015360.2 Solanum lycopersicum HOM05D003724 ORTHO05D004367 1.8e-36 157.5 109 68.8
Hma1.2p1_0200F.1_g085970 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 6.7e-31 139.0 317 32.8
GSVIVG01010478001 Vitis vinifera HOM05D003724 ORTHO05D004367 1.5e-30 137.9 74 91.9
RcHm_v2.0_Chr4g0430331 Rosa chinensis HOM05D003724 ORTHO05D004367 9.6e-30 135.2 73 91.8
Glyma.11G250351 Glycine max HOM05D003724 ORTHO05D004367 1.3e-29 134.8 79 84.8
Nitab4.5_0002119g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 3.7e-29 133.3 235 37.0
SHI17966 Sapria himalayana HOM05D003724 ORTHO05D004367 5.3e-28 129.4 124 58.9
Nitab4.5_0000767g0030 Nicotiana tabacum HOM05D003724 ORTHO05D004367 1.0e-23 115.2 140 46.4
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 1.3e-23 114.8 313 33.9
Hma1.2p1_0053F.1_g030850 Hydrangea macrophylla HOM05D003724 ORTHO05D004367 8.7e-23 112.1 316 30.1
Lsat_1_v5_gn_3_110541 Lactuca sativa HOM05D003724 ORTHO05D004367 2.5e-22 110.5 116 55.2
Os01g0165800 Oryza sativa ssp. japonica HOM05D020709 ORTHO05D004367 1.6e-21 107.8 133 43.6
PRCOL_00002813 Prasinoderma coloniale HOM05D003724 ORTHO05D004367 2.8e-21 107.1 268 29.5
vmacro18929 Vaccinium macrocarpon HOM05D003724 ORTHO05D004367 1.5e-19 101.3 151 40.4
PSO063G4593 Papaver somniferum HOM05D003724 ORTHO05D004367 1.3e-18 98.2 81 61.7
TPR.G40282 Trifolium pratense HOM05D003724 ORTHO05D004367 1.3e-18 98.2 109 48.6
Lj3g0010411 Lotus japonicus HOM05D003724 ORTHO05D004367 3.4e-11 73.6 117 41.0
PSO782G0388 Papaver somniferum HOM05D003724 ORTHO05D004367 7.2e-09 65.9 45 64.4
QL06p013707 Quercus lobata HOM05D003724 ORTHO05D000062 5.1e-07 59.7 32 93.8
SHI18623 Sapria himalayana HOM05D003724 ORTHO05D004367 6.7e-07 59.3 42 61.9
QL10p034497 Quercus lobata HOM05D003724 ORTHO05D004367 1.5e-06 58.2 32 90.6
vmacro05008 Vaccinium macrocarpon HOM05D000208 ORTHO05D426771 9.7e-06 55.5 73 42.5


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