Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09228 Brassica carinata HOM05D004156 ORTHO05D005259 1.8e-117 426.0 222 100.0
BolC4t28140H Brassica oleracea HOM05D004156 ORTHO05D005259 4.8e-107 391.3 223 93.7
BcaB01g03735 Brassica carinata HOM05D004156 ORTHO05D005259 8.2e-107 390.6 223 93.3
A04p29140 Brassica napus HOM05D004156 ORTHO05D005259 1.8e-106 389.4 223 93.3
BraA04t18383Z Brassica rapa HOM05D004156 ORTHO05D005259 1.8e-106 389.4 223 93.3
BcaNung06518 Brassica carinata HOM05D004156 ORTHO05D005259 4.1e-106 388.3 223 93.3
C04p66350 Brassica napus HOM05D004156 ORTHO05D005259 1.2e-105 386.7 223 92.8
BcaC02g12926 Brassica carinata HOM05D004156 ORTHO05D005259 1.5e-105 386.3 223 92.4
A03p21000 Brassica napus HOM05D004156 ORTHO05D005259 1.7e-104 382.9 223 91.5
BraA03t11339Z Brassica rapa HOM05D004156 ORTHO05D005259 1.7e-104 382.9 223 91.5
Thhalv10016958m.g Eutrema salsugineum HOM05D004156 ORTHO05D005259 2.5e-103 379.0 221 92.3
Sp4g20310 Schrenkiella parvula HOM05D004156 ORTHO05D005259 1.2e-102 376.7 223 91.0
BcaC01g05579 Brassica carinata HOM05D004156 ORTHO05D005259 1.8e-101 372.9 221 89.6
BcaNung06338 Brassica carinata HOM05D004156 ORTHO05D005259 1.8e-101 372.9 225 89.3
C03p24730 Brassica napus HOM05D004156 ORTHO05D005259 1.8e-101 372.9 221 89.6
BolC3t14862H Brassica oleracea HOM05D004156 ORTHO05D005259 1.8e-101 372.9 221 89.6
AL4G34970 Arabidopsis lyrata HOM05D004156 ORTHO05D005259 3.3e-92 342.0 229 83.8
AT2G37990 Arabidopsis thaliana HOM05D004156 ORTHO05D005259 5.7e-92 341.3 223 84.3
Carub.0004s1996 Capsella rubella HOM05D004156 ORTHO05D005259 5.7e-92 341.3 220 84.5
CARHR132550 Cardamine hirsuta HOM05D004156 ORTHO05D005259 1.8e-90 336.3 227 82.4
A05p08010 Brassica napus HOM05D004156 ORTHO05D005259 2.6e-89 332.4 223 83.0
BraA05t19767Z Brassica rapa HOM05D004156 ORTHO05D005259 2.6e-89 332.4 223 83.0
Aa31LG5G23180 Aethionema arabicum HOM05D004156 ORTHO05D005259 7.7e-89 330.9 222 81.1
THA.LOC104806527 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 3.5e-81 305.4 220 74.5
BcaC02g11940 Brassica carinata HOM05D004156 ORTHO05D005259 1.0e-80 303.9 177 92.7
BolC4t22574H Brassica oleracea HOM05D004156 ORTHO05D005259 1.3e-80 303.5 216 77.8
C04p09670 Brassica napus HOM05D004156 ORTHO05D005259 2.2e-80 302.8 223 77.6
BcaC02g11942 Brassica carinata HOM05D004156 ORTHO05D005259 1.5e-79 300.1 224 78.1
THA.LOC104805714 Tarenaya hassleriana HOM05D004156 ORTHO05D005259 1.0e-77 293.9 221 73.3
Gohir.D07G039500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.2e-72 276.2 223 69.5
Gorai.001G041600 Gossypium raimondii HOM05D004156 ORTHO05D005259 3.8e-72 275.4 223 69.5
Gohir.A07G035500 Gossypium hirsutum HOM05D004156 ORTHO05D005259 3.2e-71 272.3 223 68.6
Gorai.009G018400 Gossypium raimondii HOM05D004156 ORTHO05D005259 2.1e-70 269.6 222 68.0
COL.COLO4_05789 Corchorus olitorius HOM05D004156 ORTHO05D005259 4.7e-70 268.5 224 67.0
Thecc.09G124800 Theobroma cacao HOM05D004156 ORTHO05D005259 4.7e-70 268.5 223 67.7
Gohir.A05G017100 Gossypium hirsutum HOM05D004156 ORTHO05D005259 8.0e-70 267.7 222 68.0
Nn8g39422 Nelumbo nucifera HOM05D004156 ORTHO05D005259 2.3e-69 266.2 215 68.8
Peaxi162Scf00274g00336 Petunia axillaris HOM05D004156 ORTHO05D005259 1.5e-68 263.5 215 67.0
Atru.chr7.278 Acer truncatum HOM05D004156 ORTHO05D005259 2.0e-68 263.1 197 72.6
Ciclev10008881m.g Citrus clementina HOM05D004156 ORTHO05D005259 2.0e-68 263.1 222 67.6
Duzib150G1332 Durio zibethinus HOM05D004156 ORTHO05D005259 9.8e-68 260.8 223 67.3
FvH4_1g03500 Fragaria vesca HOM05D004156 ORTHO05D005259 9.8e-68 260.8 228 62.3
PSO210G0875 Papaver somniferum HOM05D004156 ORTHO05D005259 9.8e-68 260.8 220 65.9
PSO832G0272 Papaver somniferum HOM05D004156 ORTHO05D005259 9.8e-68 260.8 220 66.4
FAN23G0721 Fragaria x ananassa HOM05D004156 ORTHO05D005259 1.3e-67 260.4 220 63.6
FAN19G1880 Fragaria x ananassa HOM05D004156 ORTHO05D005259 2.2e-67 259.6 220 63.6
FAN26G1774 Fragaria x ananassa HOM05D004156 ORTHO05D005259 2.2e-67 259.6 220 63.6
FAN28G2743 Fragaria x ananassa HOM05D004156 ORTHO05D005259 2.2e-67 259.6 220 63.6
GSVIVG01027422001 Vitis vinifera HOM05D004156 ORTHO05D005259 2.2e-67 259.6 216 67.6
vmacro22115 Vaccinium macrocarpon HOM05D004156 ORTHO05D005259 3.7e-67 258.8 222 64.9
Cpa.g.sc1199.3 Carica papaya HOM05D004156 ORTHO05D005259 8.3e-67 257.7 215 67.4
PGR102G0554 Punica granatum HOM05D004156 ORTHO05D005259 8.3e-67 257.7 220 65.5
CsaV3_1G042300 Cucumis sativus L. HOM05D004156 ORTHO05D005259 1.4e-66 256.9 219 67.1
TWI32G0547 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 1.4e-66 256.9 196 70.4
CAN.G594.20 Capsicum annuum HOM05D004156 ORTHO05D005259 1.8e-66 256.5 215 67.0
Prupe.7G241100 Prunus persica HOM05D004156 ORTHO05D005259 1.8e-66 256.5 219 64.8
Actinidia35394 Actinidia chinensis HOM05D004156 ORTHO05D005259 3.1e-66 255.8 205 67.3
Nitab4.5_0005139g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 3.1e-66 255.8 220 65.5
Nitab4.5_0010819g0030 Nicotiana tabacum HOM05D004156 ORTHO05D005259 3.1e-66 255.8 220 65.5
Solyc12g006550.2 Solanum lycopersicum HOM05D004156 ORTHO05D005259 4.1e-66 255.4 231 63.2
Sopen12g002500 Solanum pennellii HOM05D004156 ORTHO05D005259 4.1e-66 255.4 231 63.2
HanXRQChr06g0181321 Helianthus annuus HOM05D004156 ORTHO05D005259 5.4e-66 255.0 224 62.9
MD15G1174800 Malus domestica HOM05D004156 ORTHO05D005259 5.4e-66 255.0 216 65.3
GSVIVG01027072001 Vitis vinifera HOM05D004156 ORTHO05D005259 5.4e-66 255.0 219 65.8
Dinv36535 Davidia involucrata HOM05D004156 ORTHO05D003047 7.0e-66 254.6 224 63.4
MD02G1034000 Malus domestica HOM05D004156 ORTHO05D005259 7.0e-66 254.6 216 65.3
Manes.14G131500 Manihot esculenta HOM05D004156 ORTHO05D005259 7.0e-66 254.6 225 64.9
SGA_v2.0_scaffold224G42948 Striga asiatica HOM05D004156 ORTHO05D005259 7.0e-66 254.6 231 64.1
MELO3C015663.2 Cucumis melo HOM05D004156 ORTHO05D005259 2.7e-65 252.7 220 66.4
HanXRQChr07g0187411 Helianthus annuus HOM05D004156 ORTHO05D005259 3.5e-65 252.3 224 62.1
TAR625G0545 Trochodendron aralioides HOM05D004156 ORTHO05D005259 3.5e-65 252.3 223 64.6
PGSC0003DMG400018964 Solanum tuberosum HOM05D004156 ORTHO05D005259 5.9e-65 251.5 231 61.9
Rhsim03G0247600 Rhododendron simsii HOM05D004156 ORTHO05D005259 7.7e-65 251.1 222 64.4
Lj7C630T1 Lonicera japonica HOM05D004156 ORTHO05D005259 1.0e-64 250.8 227 63.4
CSS0011304 Camellia sinensis var. sinensis HOM05D004156 ORTHO05D005259 1.7e-64 250.0 222 65.3
Phvul.009G258100 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 2.2e-64 249.6 215 64.2
Eucgr.E02428 Eucalyptus grandis HOM05D004156 ORTHO05D005259 3.8e-64 248.8 219 63.5
DCAR_017823 Daucus carota HOM05D004156 ORTHO05D005259 5.0e-64 248.4 227 61.7
Sed0021765 Sechium edule HOM05D004156 ORTHO05D005259 6.5e-64 248.1 223 63.2
VMungo1309G1108 Vigna mungo HOM05D004156 ORTHO05D005259 1.5e-63 246.9 215 63.7
Glyma.17G115500 Glycine max HOM05D004156 ORTHO05D005259 1.9e-63 246.5 214 64.5
SGA_v2.0_scaffold35G14133 Striga asiatica HOM05D004156 ORTHO05D005259 1.9e-63 246.5 221 64.3
ClCG03G013780 Citrullus lanatus HOM05D004156 ORTHO05D005259 2.5e-63 246.1 229 62.0
Sabra05G0178400 Salix brachista HOM05D004156 ORTHO05D000382 2.5e-63 246.1 202 65.8
Cfa002719 Carpinus fangiana HOM05D004156 ORTHO05D005259 3.2e-63 245.7 217 63.1
Cc06_g08630 Coffea canephora HOM05D004156 ORTHO05D005259 3.2e-63 245.7 231 60.6
Glyma.13G167900 Glycine max HOM05D004156 ORTHO05D005259 3.2e-63 245.7 213 64.8
Hma1.2p1_0018F.1_g012530 Hydrangea macrophylla HOM05D004156 ORTHO05D005259 3.2e-63 245.7 231 63.6
MSTRG.12622 Avicennia marina HOM05D004156 ORTHO05D005259 5.5e-63 245.0 215 62.8
CANSAT11G1878 Cannabis sativa HOM05D004156 ORTHO05D005259 5.5e-63 245.0 226 63.3
Phvul.003G163900 Phaseolus vulgaris HOM05D004156 ORTHO05D005259 9.5e-63 244.2 218 61.5
CiPaw.15G031800 Carya illinoinensis HOM05D004156 ORTHO05D005259 1.2e-62 243.8 208 64.4
CiPaw.07G232300 Carya illinoinensis HOM05D004156 ORTHO05D005259 1.6e-62 243.4 215 64.7
Haze_24995 Corylus avellana HOM05D004156 ORTHO05D005259 1.6e-62 243.4 217 63.6
Potri.005G231000 Populus trichocarpa HOM05D004156 ORTHO05D005259 1.6e-62 243.4 202 65.3
VMungo1215G1862 Vigna mungo HOM05D004156 ORTHO05D005259 2.1e-62 243.0 220 61.8
Lsat_1_v5_gn_9_120581 Lactuca sativa HOM05D004156 ORTHO05D005259 2.7e-62 242.7 225 60.0
RcHm_v2.0_Chr2g0088711 Rosa chinensis HOM05D004156 ORTHO05D005259 3.6e-62 242.3 220 60.5
Aqoxy2G02204 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 4.7e-62 241.9 202 64.4
Aqoxy6G01405 Aquilegia oxysepala HOM05D004156 ORTHO05D005259 4.7e-62 241.9 202 64.4
ECA247G0053 Erigeron canadensis HOM05D004156 ORTHO05D005259 4.7e-62 241.9 223 60.5
MBI01_g37801_MAGBIO Magnolia biondii HOM05D004156 ORTHO05D005259 6.1e-62 241.5 197 67.0
DCAR_014878 Daucus carota HOM05D004156 ORTHO05D005259 1.4e-61 240.4 197 66.5
arahy.Tifrunner.gnm1.ann1.KP5LKI Arachis hypogaea HOM05D004156 ORTHO05D005259 3.0e-61 239.2 220 60.9
Lj4g0019515 Lotus japonicus HOM05D004156 ORTHO05D005259 4.0e-61 238.8 215 60.5
ATR0730G095 Amborella trichopoda HOM05D004156 ORTHO05D005259 8.8e-61 237.7 222 60.4
arahy.Tifrunner.gnm1.ann1.FDU8BE Arachis hypogaea HOM05D004156 ORTHO05D005259 1.5e-60 236.9 214 61.7
HPP92_015694 Vanilla planifolia HOM05D004156 ORTHO05D005259 1.5e-60 236.9 196 67.9
unitig_21.g20656 Utricularia gibba HOM05D004156 ORTHO05D005259 2.0e-60 236.5 229 59.8
Sed0019954 Sechium edule HOM05D004156 ORTHO05D005259 3.4e-60 235.7 220 60.9
Sc14g0000240 Simmondsia chinensis HOM05D004156 ORTHO05D005259 3.4e-60 235.7 195 64.6
Ah.14g087130 Amaranthus hybridus HOM05D004156 ORTHO05D005259 5.7e-60 235.0 196 64.8
Lalb_Chr07g0178901 Lupinus albus HOM05D004156 ORTHO05D005259 7.5e-60 234.6 233 60.1
Psat2g006920 Pisum sativum HOM05D004156 ORTHO05D005259 9.8e-60 234.2 219 59.8
Lalb_Chr12g0197861 Lupinus albus HOM05D004156 ORTHO05D005259 1.3e-59 233.8 220 60.5
Oeu055874.1 Olea europaea HOM05D004156 ORTHO05D005259 1.7e-59 233.4 231 59.7
TWI34G0257 Tripterygium wilfordii HOM05D004156 ORTHO05D005259 3.7e-59 232.3 255 56.1
Migut.L01695 Erythranthe guttata HOM05D004156 ORTHO05D005259 6.3e-59 231.5 196 62.8
ClCG06G011000 Citrullus lanatus HOM05D004156 ORTHO05D005259 1.8e-58 229.9 230 57.8
TPR.G25243 Trifolium pratense HOM05D004156 ORTHO05D005259 5.4e-58 228.4 218 60.6
Medtr2g008870 Medicago truncatula HOM05D004156 ORTHO05D005259 1.6e-57 226.9 220 59.1
QL02p088083 Quercus lobata HOM05D004156 ORTHO05D005259 3.5e-57 225.7 197 61.9
EL10Ac8g18639 Beta vulgaris HOM05D004156 ORTHO05D005259 5.9e-57 224.9 225 58.2
AUR62013371 Chenopodium quinoa HOM05D004156 ORTHO05D005259 1.3e-56 223.8 197 61.4
AUR62011120 Chenopodium quinoa HOM05D004156 ORTHO05D005259 2.9e-56 222.6 197 60.9
Gohir.D05G018000 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.9e-56 222.6 162 73.5
Zm00001eb122260 Zea mays HOM05D004156 ORTHO05D005259 1.5e-55 220.3 219 58.9
Os04g0685100 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 3.3e-55 219.2 219 58.9
BcaC09g49789 Brassica carinata HOM05D004156 ORTHO05D005259 9.5e-55 217.6 139 85.6
Mapoly0036s0028 Marchantia polymorpha HOM05D004156 ORTHO05D005259 9.5e-55 217.6 210 57.1
Gohir.D08G025232 Gossypium hirsutum HOM05D004156 ORTHO05D005259 1.8e-53 213.4 255 52.5
SalBow5G0058 Salvia bowleyana HOM05D004156 ORTHO05D005259 6.8e-53 211.5 301 45.5
HanXRQChr06g0181331 Helianthus annuus HOM05D004156 ORTHO05D005259 1.2e-52 210.7 166 67.5
SEGI_31652 Sequoiadendron giganteum HOM05D004156 ORTHO05D005259 4.1e-50 202.2 220 52.7
Actinidia26780 Actinidia chinensis HOM05D004156 ORTHO05D005259 6.6e-48 194.9 236 53.8
CDE04G1546 Ceratophyllum demersum HOM05D004156 ORTHO05D005259 8.6e-48 194.5 201 54.2
AagrBONN_evm.TU.Sc2ySwM_368.2845 Anthoceros agrestis HOM05D004156 ORTHO05D005259 7.3e-47 191.4 211 52.6
Hund09135 Selenicereus undatus HOM05D004156 ORTHO05D005259 7.3e-47 191.4 235 51.1
Atru.chr7.1220 Acer truncatum HOM05D004156 ORTHO05D005259 6.2e-46 188.3 217 51.6
SMO351G0347 Selaginella moellendorffii HOM05D004156 ORTHO05D005259 1.0e-45 187.6 190 54.2
Pp3c3_32550 Physcomitrium patens HOM05D004156 ORTHO05D005259 5.2e-45 185.3 215 53.0
CBR_g18768 Chara braunii HOM05D004156 ORTHO05D005259 8.9e-45 184.5 196 53.1
Gohir.A08G014600 Gossypium hirsutum HOM05D004156 ORTHO05D005259 2.0e-44 183.3 142 73.2
Ca_00137_v3 Cicer arietinum L. HOM05D004156 ORTHO05D000741 9.8e-44 181.0 220 52.3
Zm00001eb337040 Zea mays HOM05D004156 ORTHO05D005259 2.9e-43 179.5 215 52.6
Sc18g0000640 Simmondsia chinensis HOM05D004156 ORTHO05D005259 1.9e-39 166.8 201 48.8
Nitab4.5_0002556g0050 Nicotiana tabacum HOM05D004156 ORTHO05D005259 2.1e-33 146.7 175 53.1
Oeu045226.1 Olea europaea HOM05D004156 ORTHO05D005259 8.1e-30 134.8 211 44.5
C01p32910 Brassica napus HOM05D004156 ORTHO05D005259 4.4e-28 129.0 99 72.7
Os06g0142050 Oryza sativa ssp. japonica HOM05D004156 ORTHO05D005259 9.9e-28 127.9 163 53.4
Cre01.g020950 Chlamydomonas reinhardtii HOM05D004156 ORTHO05D005259 2.2e-27 126.7 215 40.0
C03p24670 Brassica napus HOM05D004156 ORTHO05D005259 1.6e-25 120.6 62 95.2
TAR626G0974 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.6e-25 120.6 84 77.4
Actinidia37158 Actinidia chinensis HOM05D004156 ORTHO05D005259 7.3e-23 111.7 115 60.9
TAR383G1033 Trochodendron aralioides HOM05D004156 ORTHO05D005259 1.2e-22 110.9 99 67.7
MCO03G226 Micromonas commoda HOM05D004156 ORTHO05D005259 1.8e-13 80.5 221 33.0
AagrBONN_evm.TU.Sc2ySwM_228.5042 Anthoceros agrestis HOM05D004156 ORTHO05D005259 9.0e-13 78.2 103 46.6
PRCOL_00002162 Prasinoderma coloniale HOM05D004156 ORTHO05D005259 1.1e-10 71.2 138 36.2
Rhsim11G0147700 Rhododendron simsii HOM05D004156 ORTHO05D338749 5.1e-08 62.4 54 61.1
TAR636G0452 Trochodendron aralioides HOM05D000809 ORTHO05D007735 1.1e-07 61.2 43 67.4


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