Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.1023 Acer truncatum HOM05D006589 ORTHO05D008350 0.0e+00 1437.9 703 100.0
Thecc.03G124600 Theobroma cacao HOM05D006589 ORTHO05D008350 1.1e-306 1056.2 621 82.6
Ciclev10019152m.g Citrus clementina HOM05D006589 ORTHO05D008350 1.3e-304 1049.3 623 82.7
Dinv04849 Davidia involucrata HOM05D006589 ORTHO05D008350 3.6e-302 1041.2 625 80.5
Gohir.D07G057600 Gossypium hirsutum HOM05D006589 ORTHO05D008350 3.6e-302 1041.2 625 81.6
Gohir.A07G053200 Gossypium hirsutum HOM05D006589 ORTHO05D008350 9.0e-301 1036.6 625 80.6
COL.COLO4_16830 Corchorus olitorius HOM05D006589 ORTHO05D008350 8.4e-299 1030.0 626 80.2
Prupe.5G155500 Prunus persica HOM05D006589 ORTHO05D008350 2.1e-297 1025.4 620 80.0
Gorai.001G061100 Gossypium raimondii HOM05D006589 ORTHO05D008350 6.0e-297 1023.8 621 80.7
Cfa018872 Carpinus fangiana HOM05D006589 ORTHO05D008350 2.5e-295 1018.5 625 79.7
CSS0007976 Camellia sinensis var. sinensis HOM05D006589 ORTHO05D008350 4.3e-295 1017.7 623 78.3
Haze_07256 Corylus avellana HOM05D006589 ORTHO05D008350 9.6e-295 1016.5 631 78.9
CsaV3_1G000740 Cucumis sativus L. HOM05D006589 ORTHO05D008350 2.8e-294 1015.0 619 77.7
Actinidia36794 Actinidia chinensis HOM05D006589 ORTHO05D008350 6.2e-294 1013.8 628 77.5
Eucgr.B00143 Eucalyptus grandis HOM05D006589 ORTHO05D008350 1.8e-293 1012.3 622 78.3
Manes.14G054400 Manihot esculenta HOM05D006589 ORTHO05D008350 1.5e-292 1009.2 626 78.0
MD14G1162400 Malus domestica HOM05D006589 ORTHO05D008350 2.7e-289 998.4 629 76.9
PGR083G2113 Punica granatum HOM05D006589 ORTHO05D008350 4.6e-289 997.7 629 76.6
Sabra15G0113500 Salix brachista HOM05D006589 ORTHO05D008350 4.6e-289 997.7 625 77.1
THA.LOC104798952 Tarenaya hassleriana HOM05D006589 ORTHO05D008350 1.9e-287 992.3 623 76.7
Potri.015G091700 Populus trichocarpa HOM05D006589 ORTHO05D008350 4.3e-287 991.1 625 76.6
FvH4_5g07670 Fragaria vesca HOM05D006589 ORTHO05D008350 1.8e-285 985.7 623 76.7
Nitab4.5_0005327g0070 Nicotiana tabacum HOM05D006589 ORTHO05D008350 4.0e-285 984.6 625 76.8
Nitab4.5_0001664g0100 Nicotiana tabacum HOM05D006589 ORTHO05D008350 5.8e-284 980.7 640 75.3
RcHm_v2.0_Chr7g0190801 Rosa chinensis HOM05D006589 ORTHO05D008350 5.8e-284 980.7 619 76.6
TAR622G1334 Trochodendron aralioides HOM05D006589 ORTHO05D008350 5.8e-284 980.7 624 76.6
FAN18G3475 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.0e-283 979.9 623 76.4
Peaxi162Scf00089g00326 Petunia axillaris HOM05D006589 ORTHO05D008350 2.9e-283 978.4 625 77.3
CANSAT80G0035 Cannabis sativa HOM05D006589 ORTHO05D008350 6.5e-283 977.2 627 75.4
EL10As4g23464 Beta vulgaris HOM05D006589 ORTHO05D008350 1.4e-282 976.1 622 74.8
FAN13G0522 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.6e-281 972.6 620 75.6
FAN04G1748 Fragaria x ananassa HOM05D006589 ORTHO05D008350 3.5e-281 971.5 622 75.4
FAN08G0518 Fragaria x ananassa HOM05D006589 ORTHO05D008350 4.6e-281 971.1 620 75.5
AL5G27930 Arabidopsis lyrata HOM05D006589 ORTHO05D008350 7.9e-281 970.3 627 75.3
QL10p004744 Quercus lobata HOM05D006589 ORTHO05D008350 7.9e-281 970.3 634 75.6
TWI23G0930 Tripterygium wilfordii HOM05D006589 ORTHO05D008350 7.9e-281 970.3 638 73.4
CARHR157250 Cardamine hirsuta HOM05D006589 ORTHO05D008350 3.9e-280 968.0 630 74.4
Thhalv10010171m.g Eutrema salsugineum HOM05D006589 ORTHO05D008350 8.7e-280 966.8 627 75.8
Sp5g13530 Schrenkiella parvula HOM05D006589 ORTHO05D008350 8.7e-280 966.8 623 74.6
Aa31LG4G17110 Aethionema arabicum HOM05D006589 ORTHO05D008350 1.1e-279 966.5 632 73.9
Carub.0005s1468 Capsella rubella HOM05D006589 ORTHO05D008350 1.9e-279 965.7 623 75.4
Sc22g0004160 Simmondsia chinensis HOM05D006589 ORTHO05D008350 3.3e-279 964.9 622 75.7
PGSC0003DMG400015251 Solanum tuberosum HOM05D006589 ORTHO05D008350 4.3e-279 964.5 671 72.0
Nn4g22414 Nelumbo nucifera HOM05D006589 ORTHO05D008350 2.2e-278 962.2 624 75.2
Ca_15262_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 1.1e-277 959.9 652 73.5
Solyc03g111050.3 Solanum lycopersicum HOM05D006589 ORTHO05D008350 1.1e-277 959.9 671 72.0
BcaB05g23014 Brassica carinata HOM05D006589 ORTHO05D008350 1.4e-277 959.5 627 74.5
BcaC09g49867 Brassica carinata HOM05D006589 ORTHO05D008350 1.8e-277 959.1 629 74.1
Sopen03g030220 Solanum pennellii HOM05D006589 ORTHO05D008350 2.4e-277 958.7 625 75.7
BolC1t03137H Brassica oleracea HOM05D006589 ORTHO05D008350 4.1e-277 958.0 629 73.9
Cpa.g.sc4.99 Carica papaya HOM05D006589 ORTHO05D008350 4.1e-277 958.0 624 75.5
BraA01t02452Z Brassica rapa HOM05D006589 ORTHO05D008350 5.3e-277 957.6 628 73.9
C01p32170 Brassica napus HOM05D006589 ORTHO05D008350 1.2e-276 956.4 629 73.8
A01p25610 Brassica napus HOM05D006589 ORTHO05D008350 1.5e-276 956.1 628 73.9
Duzib205G1155 Durio zibethinus HOM05D006589 ORTHO05D008350 2.0e-276 955.7 624 75.5
Glyma.04G193700 Glycine max HOM05D006589 ORTHO05D008350 7.7e-276 953.7 627 74.8
Glyma.06G172400 Glycine max HOM05D006589 ORTHO05D008350 2.2e-275 952.2 623 75.3
Aqoxy5G03523 Aquilegia oxysepala HOM05D006589 ORTHO05D008350 2.9e-275 951.8 625 74.6
Sed0022036 Sechium edule HOM05D006589 ORTHO05D008350 5.0e-275 951.0 621 74.1
Migut.I00491 Erythranthe guttata HOM05D006589 ORTHO05D008350 1.9e-274 949.1 627 73.4
ClCG06G017720 Citrullus lanatus HOM05D006589 ORTHO05D008350 7.2e-274 947.2 619 74.0
Psat5g140160 Pisum sativum HOM05D006589 ORTHO05D008350 3.9e-272 941.4 622 74.3
Medtr3g075050 Medicago truncatula HOM05D006589 ORTHO05D008350 2.0e-271 939.1 623 73.4
SalBow5G1883 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.8e-269 932.6 633 73.5
TPR.G26148 Trifolium pratense HOM05D006589 ORTHO05D008350 1.8e-269 932.6 635 72.0
Lj1g0010015 Lotus japonicus HOM05D006589 ORTHO05D008350 5.3e-269 931.0 630 73.2
PSO782G1921 Papaver somniferum HOM05D006589 ORTHO05D008350 6.9e-269 930.6 628 72.1
SalBow5G0933 Salvia bowleyana HOM05D006589 ORTHO05D008350 1.5e-268 929.5 634 73.2
DCAR_007473 Daucus carota HOM05D006589 ORTHO05D008350 1.0e-267 926.8 623 72.4
Lsat_1_v5_gn_5_13320 Lactuca sativa HOM05D006589 ORTHO05D008350 2.2e-267 925.6 620 71.0
PSO063G3222 Papaver somniferum HOM05D006589 ORTHO05D008350 2.2e-267 925.6 637 71.6
Hund02417 Selenicereus undatus HOM05D006589 ORTHO05D008350 2.5e-266 922.2 625 71.8
Phvul.009G168200 Phaseolus vulgaris HOM05D006589 ORTHO05D008350 3.2e-266 921.8 619 71.7
AT3G48500 Arabidopsis thaliana HOM05D006589 ORTHO05D008350 5.5e-266 921.0 624 72.1
arahy.Tifrunner.gnm1.ann1.DGQ22E Arachis hypogaea HOM05D006589 ORTHO05D008350 3.9e-264 914.8 571 75.8
Lj5A99T74 Lonicera japonica HOM05D006589 ORTHO05D008350 1.1e-263 913.3 651 69.9
arahy.Tifrunner.gnm1.ann1.RTQA9M Arachis hypogaea HOM05D006589 ORTHO05D008350 3.3e-263 911.8 571 75.7
HanXRQChr05g0158451 Helianthus annuus HOM05D006589 ORTHO05D008350 5.7e-263 911.0 620 70.0
Lalb_Chr11g0069681 Lupinus albus HOM05D006589 ORTHO05D008350 2.8e-262 908.7 629 71.4
ECA246G1540 Erigeron canadensis HOM05D006589 ORTHO05D008350 3.2e-258 895.2 613 70.0
CDE02G2664 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 1.4e-256 889.8 625 69.6
Rhsim12G0172500 Rhododendron simsii HOM05D006589 ORTHO05D008350 1.5e-250 869.8 626 68.5
GSVIVG01008490001 Vitis vinifera HOM05D006589 ORTHO05D008350 2.1e-249 865.9 551 76.8
MELO3C026221.2 Cucumis melo HOM05D006589 ORTHO05D008350 1.3e-246 856.7 747 60.0
Cc04_g10160 Coffea canephora HOM05D006589 ORTHO05D008350 2.2e-246 855.9 556 74.3
CAN.G352.47 Capsicum annuum HOM05D006589 ORTHO05D008350 3.8e-243 845.1 553 75.6
MBI08_g33782_MAGBIO Magnolia biondii HOM05D006589 ORTHO05D008350 5.5e-242 841.3 628 67.2
AUR62025863 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.2e-241 840.1 618 67.8
AUR62029828 Chenopodium quinoa HOM05D006589 ORTHO05D008350 1.5e-239 833.2 548 73.7
HPP92_003572 Vanilla planifolia HOM05D006589 ORTHO05D008350 2.3e-235 819.3 598 66.4
vmacro16654 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 6.1e-233 811.2 754 57.2
Ah.02g115320 Amaranthus hybridus HOM05D006589 ORTHO05D008350 2.0e-223 779.6 622 64.5
SGA_v2.0_scaffold161G37820 Striga asiatica HOM05D006589 ORTHO05D008350 1.9e-218 763.1 590 66.6
CiPaw.12G036500 Carya illinoinensis HOM05D006589 ORTHO05D008350 4.3e-210 735.3 467 78.6
Zm00001eb365570 Zea mays HOM05D006589 ORTHO05D008350 2.5e-202 709.5 576 60.1
vmacro16714 Vaccinium macrocarpon HOM05D006589 ORTHO05D008350 2.3e-195 686.4 774 50.1
Oeu006374.4 Olea europaea HOM05D006589 ORTHO05D000550 3.1e-168 596.3 388 72.4
unitig_0.g1070 Utricularia gibba HOM05D006589 ORTHO05D008350 9.4e-149 531.6 368 71.2
Os01g0901900 Oryza sativa ssp. japonica HOM05D006589 ORTHO05D008350 3.7e-145 519.6 422 60.9
Mapoly0120s0021 Marchantia polymorpha HOM05D006589 ORTHO05D008350 1.0e-131 474.9 529 49.7
Pp3c18_13570 Physcomitrium patens HOM05D006589 ORTHO05D008350 4.5e-119 433.0 559 45.3
ATR0060G001 Amborella trichopoda HOM05D006589 ORTHO05D008350 3.5e-111 406.8 345 60.3
Ca_15265_v3 Cicer arietinum L. HOM05D006589 ORTHO05D008350 6.0e-103 379.4 257 72.8
unitig_0.g1069 Utricularia gibba HOM05D006589 ORTHO05D008350 3.5e-95 353.6 258 67.1
FAN21G1369 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.3e-94 350.9 279 63.8
FAN21G3066 Fragaria x ananassa HOM05D006589 ORTHO05D008350 2.3e-94 350.9 279 63.8
SMO356G0597 Selaginella moellendorffii HOM05D006589 ORTHO05D008350 3.6e-92 343.6 558 38.5
ATR0686G112 Amborella trichopoda HOM05D006589 ORTHO05D008350 1.2e-82 312.0 227 66.5
RcHm_v2.0_Chr1g0380381 Rosa chinensis HOM05D006589 ORTHO05D008350 1.3e-78 298.5 235 66.0
CBR_g31403 Chara braunii HOM05D006589 ORTHO05D008350 1.0e-62 245.7 592 30.1
HPP92_003575 Vanilla planifolia HOM05D006589 ORTHO05D008350 1.0e-54 219.2 243 49.4
SEGI_40144 Sequoiadendron giganteum HOM05D006589 ORTHO05D008350 1.1e-53 215.7 251 47.4
CDE09G0508 Ceratophyllum demersum HOM05D006589 ORTHO05D008350 5.3e-43 180.3 180 51.1
FAN25G1587 Fragaria x ananassa HOM05D006589 ORTHO05D008350 1.3e-41 175.6 139 67.6
arahy.Tifrunner.gnm1.ann1.85RMBE Arachis hypogaea HOM05D006589 ORTHO05D008350 6.1e-31 140.2 142 54.2
arahy.Tifrunner.gnm1.ann1.Q1JBFY Arachis hypogaea HOM05D006589 ORTHO05D008350 3.7e-28 131.0 124 52.4
MCO14G318 Micromonas commoda HOM05D006589 ORTHO05D008350 7.7e-10 70.1 110 38.2
Cre07.g348500 Chlamydomonas reinhardtii HOM05D006589 ORTHO05D008350 2.3e-06 58.5 79 35.4


User provided reference genes

Program Settings