Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 5.9e-73 277.3 131 100.0
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 3.6e-38 161.8 119 63.0
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 4.0e-37 158.3 118 61.9
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 4.0e-37 158.3 126 57.9
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 1.2e-36 156.8 126 61.9
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 2.0e-36 156.0 121 59.5
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 2.0e-36 156.0 126 57.1
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 2.0e-36 156.0 126 57.9
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 9.9e-36 153.7 121 59.5
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 1.3e-35 153.3 126 56.3
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 1.7e-35 152.9 120 59.2
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 2.2e-35 152.5 134 55.2
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 4.9e-35 151.4 127 55.9
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 6.4e-35 151.0 126 55.6
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 6.4e-35 151.0 122 58.2
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 1.4e-34 149.8 127 57.5
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 1.4e-34 149.8 119 60.5
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 1.9e-34 149.4 126 55.6
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 2.4e-34 149.1 126 55.6
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 5.4e-34 147.9 126 55.6
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 7.1e-34 147.5 123 57.7
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 7.1e-34 147.5 126 57.1
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.2e-33 146.7 126 56.3
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 1.2e-33 146.7 119 59.7
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.6e-33 146.4 119 55.5
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 2.1e-33 146.0 130 52.3
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 2.1e-33 146.0 126 57.9
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 2.1e-33 146.0 121 57.0
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 2.7e-33 145.6 119 56.3
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 2.7e-33 145.6 126 55.6
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 2.7e-33 145.6 126 54.0
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 2.7e-33 145.6 126 54.8
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 3.5e-33 145.2 134 55.2
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 4.6e-33 144.8 126 57.9
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 4.6e-33 144.8 126 53.2
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 4.6e-33 144.8 121 56.2
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 6.0e-33 144.4 116 56.0
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 6.0e-33 144.4 126 55.6
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 7.9e-33 144.1 126 52.4
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 7.9e-33 144.1 135 54.1
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 7.9e-33 144.1 127 55.9
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 1.3e-32 143.3 150 48.7
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 1.7e-32 142.9 120 57.5
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 1.7e-32 142.9 120 56.7
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 3.0e-32 142.1 121 55.4
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 3.0e-32 142.1 121 54.5
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 3.9e-32 141.7 121 57.0
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 5.1e-32 141.4 121 55.4
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 5.1e-32 141.4 120 58.3
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 5.1e-32 141.4 119 53.8
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 6.6e-32 141.0 126 56.3
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 8.7e-32 140.6 125 54.4
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 8.7e-32 140.6 127 54.3
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 8.7e-32 140.6 113 57.5
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 8.7e-32 140.6 113 57.5
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 1.1e-31 140.2 124 53.2
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 1.1e-31 140.2 113 57.5
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.5e-31 139.8 126 54.0
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 1.5e-31 139.8 127 53.5
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 2.5e-31 139.0 121 53.7
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 3.3e-31 138.7 126 54.8
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 4.3e-31 138.3 121 53.7
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 5.6e-31 137.9 121 54.5
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 5.6e-31 137.9 121 54.5
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 7.4e-31 137.5 121 54.5
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 7.4e-31 137.5 115 59.1
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 3.6e-30 135.2 119 53.8
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 3.6e-30 135.2 127 49.6
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 4.8e-30 134.8 121 53.7
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 6.2e-30 134.4 127 50.4
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 1.1e-29 133.7 127 50.4
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.1e-29 133.7 128 50.8
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 1.4e-29 133.3 116 54.3
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 1.8e-29 132.9 121 52.9
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 1.8e-29 132.9 126 51.6
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.1e-29 132.1 130 50.0
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 4.0e-29 131.7 130 50.8
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 4.0e-29 131.7 119 49.6
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 4.0e-29 131.7 129 49.6
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 6.9e-29 131.0 126 49.2
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 6.9e-29 131.0 121 52.9
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 9.0e-29 130.6 127 51.2
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 9.0e-29 130.6 127 49.6
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.2e-28 130.2 129 49.6
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 2.0e-28 129.4 113 51.3
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.4e-28 128.6 129 48.8
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.4e-28 128.6 130 50.0
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 3.4e-28 128.6 127 48.8
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 4.5e-28 128.3 126 48.4
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 4.5e-28 128.3 129 48.8
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 9.9e-28 127.1 126 48.4
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 9.9e-28 127.1 129 48.8
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 1.7e-27 126.3 97 54.6
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 2.9e-27 125.6 122 49.2
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 2.9e-27 125.6 127 48.0
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 2.9e-27 125.6 113 51.3
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 4.9e-27 124.8 121 49.6
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 4.9e-27 124.8 121 49.6
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 8.4e-27 124.0 97 52.6
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 1.1e-26 123.6 112 54.5
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.1e-26 123.6 112 54.5
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 1.1e-26 123.6 111 52.3
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 1.4e-26 123.2 123 50.4
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 1.4e-26 123.2 115 47.8
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 3.2e-26 122.1 128 50.0
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 3.2e-26 122.1 165 41.2
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 5.5e-26 121.3 128 46.9
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.5e-23 113.2 114 50.9
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 4.3e-23 111.7 147 40.8
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 4.3e-23 111.7 115 45.2
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 9.6e-23 110.5 128 43.8
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 8.1e-22 107.5 115 44.3
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 6.9e-21 104.4 115 44.3
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.0e-20 102.8 112 50.9
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 4.9e-19 98.2 114 43.0
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 3.5e-17 92.0 77 61.0
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 2.3e-16 89.4 87 52.9
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 5.3e-13 78.2 71 54.9
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 7.6e-12 74.3 68 47.1
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 1.3e-11 73.6 78 47.4
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.3e-11 73.6 50 60.0
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 9.3e-10 67.4 48 56.2


User provided reference genes

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