Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2866 Acer truncatum HOM05D001406 ORTHO05D006300 4.8e-66 254.2 117 100.0
Atru.chr4.2868 Acer truncatum HOM05D001406 ORTHO05D006300 1.6e-56 222.6 114 92.1
Atru.chr4.2862 Acer truncatum HOM05D001406 ORTHO05D006300 2.6e-56 221.9 114 92.1
Ciclev10004172m.g Citrus clementina HOM05D001406 ORTHO05D006300 8.5e-47 190.3 112 78.6
QL06p009115 Quercus lobata HOM05D001406 ORTHO05D006300 8.8e-44 180.3 114 75.4
QL06p009350 Quercus lobata HOM05D001406 ORTHO05D006300 2.0e-43 179.1 114 74.6
Lalb_Chr18g0051641 Lupinus albus HOM05D001406 ORTHO05D006300 4.4e-43 177.9 114 75.4
Prupe.1G134700 Prunus persica HOM05D001406 ORTHO05D006300 5.7e-43 177.6 114 74.6
Dinv44369 Davidia involucrata HOM05D001406 ORTHO05D006300 1.3e-42 176.4 114 73.7
Potri.010G013300 Populus trichocarpa HOM05D001406 ORTHO05D006300 3.7e-42 174.9 114 74.6
CSS0049595 Camellia sinensis var. sinensis HOM05D001406 ORTHO05D006300 4.8e-42 174.5 114 75.4
CiPaw.01G147700 Carya illinoinensis HOM05D001406 ORTHO05D006300 6.3e-42 174.1 114 73.7
COL.COLO4_13851 Corchorus olitorius HOM05D001406 ORTHO05D006300 1.1e-41 173.3 114 75.4
Sabra10G0008500 Salix brachista HOM05D001406 ORTHO05D006300 1.1e-41 173.3 114 73.7
Glyma.09G044100 Glycine max HOM05D001406 ORTHO05D006300 3.1e-41 171.8 114 71.9
Phvul.009G248800 Phaseolus vulgaris HOM05D001406 ORTHO05D006300 4.1e-41 171.4 114 71.9
arahy.Tifrunner.gnm1.ann1.4JB89L Arachis hypogaea HOM05D001406 ORTHO05D006300 7.0e-41 170.6 114 71.1
arahy.Tifrunner.gnm1.ann1.Q4RDUH Arachis hypogaea HOM05D001406 ORTHO05D006300 7.0e-41 170.6 114 71.1
Haze_01188 Corylus avellana HOM05D001406 ORTHO05D006300 1.2e-40 169.9 114 71.9
Gohir.A10G164700 Gossypium hirsutum HOM05D001406 ORTHO05D006300 1.2e-40 169.9 114 71.9
Gorai.011G191000 Gossypium raimondii HOM05D001406 ORTHO05D006300 1.2e-40 169.9 114 71.9
Duzib212G0336 Durio zibethinus HOM05D001406 ORTHO05D006300 2.0e-40 169.1 114 72.8
Glyma.15G149000 Glycine max HOM05D001406 ORTHO05D006300 2.0e-40 169.1 114 71.1
MD16G1167900 Malus domestica HOM05D001406 ORTHO05D006300 2.0e-40 169.1 114 71.1
Hund20543 Selenicereus undatus HOM05D001406 ORTHO05D006300 2.0e-40 169.1 114 71.1
Ca_01929_v3 Cicer arietinum L. HOM05D001406 ORTHO05D006300 2.7e-40 168.7 113 70.8
Thecc.04G286100 Theobroma cacao HOM05D001406 ORTHO05D006300 2.7e-40 168.7 115 75.7
VMungo1309G1537 Vigna mungo HOM05D001406 ORTHO05D006300 5.9e-40 167.5 114 71.1
GSVIVG01017722001 Vitis vinifera HOM05D001406 ORTHO05D006300 5.9e-40 167.5 114 70.2
Cfa015397 Carpinus fangiana HOM05D001406 ORTHO05D006300 7.7e-40 167.2 114 71.1
TAR370G0006 Trochodendron aralioides HOM05D001406 ORTHO05D006300 7.7e-40 167.2 114 69.3
Gohir.D10G170900 Gossypium hirsutum HOM05D001406 ORTHO05D006300 1.0e-39 166.8 114 71.1
Hma1.2p1_1185F.1_g265020 Hydrangea macrophylla HOM05D001406 ORTHO05D006300 1.3e-39 166.4 116 68.1
Hma1.2p1_1185F.1_g265030 Hydrangea macrophylla HOM05D001406 ORTHO05D006300 1.3e-39 166.4 116 68.1
Psat1g154920 Pisum sativum HOM05D001406 ORTHO05D006300 1.7e-39 166.0 113 69.0
Nn4g25794 Nelumbo nucifera HOM05D001406 ORTHO05D006300 2.9e-39 165.2 114 69.3
Lj6C678T4 Lonicera japonica HOM05D001406 ORTHO05D006300 5.0e-39 164.5 114 71.1
Oeu026316.2 Olea europaea HOM05D001406 ORTHO05D006300 5.0e-39 164.5 112 71.4
Cc03_g01780 Coffea canephora HOM05D001406 ORTHO05D006300 1.1e-38 163.3 116 69.0
Medtr2g436590 Medicago truncatula HOM05D001406 ORTHO05D006300 1.5e-38 162.9 113 69.0
Eucgr.C00258 Eucalyptus grandis HOM05D001406 ORTHO05D006300 2.5e-38 162.2 114 64.9
Manes.03G196500 Manihot esculenta HOM05D001406 ORTHO05D006300 2.5e-38 162.2 113 71.7
CANSAT78G1952 Cannabis sativa HOM05D001406 ORTHO05D006300 3.3e-38 161.8 114 66.7
CAN.G484.37 Capsicum annuum HOM05D001406 ORTHO05D006300 4.2e-38 161.4 114 66.7
RcHm_v2.0_Chr4g0422791 Rosa chinensis HOM05D001406 ORTHO05D006300 5.5e-38 161.0 114 67.5
Eucgr.C00455 Eucalyptus grandis HOM05D001406 ORTHO05D006300 7.2e-38 160.6 114 64.9
Eucgr.C00332 Eucalyptus grandis HOM05D001406 ORTHO05D006300 1.2e-37 159.8 114 64.9
TPR.G26890 Trifolium pratense HOM05D001406 ORTHO05D006300 2.8e-37 158.7 113 67.3
PSO170G4998 Papaver somniferum HOM05D001406 ORTHO05D006300 4.7e-37 157.9 113 68.1
Migut.G00150 Erythranthe guttata HOM05D001406 ORTHO05D006300 6.1e-37 157.5 114 66.7
THA.LOC104821780 Tarenaya hassleriana HOM05D001406 ORTHO05D006300 8.0e-37 157.1 114 65.8
Nitab4.5_0000570g0200 Nicotiana tabacum HOM05D001406 ORTHO05D006300 1.0e-36 156.8 116 63.8
MELO3C021323.2 Cucumis melo HOM05D001406 ORTHO05D006300 1.4e-36 156.4 114 68.4
FvH4_4g18310 Fragaria vesca HOM05D001406 ORTHO05D006300 1.4e-36 156.4 114 64.0
FAN12G0087 Fragaria x ananassa HOM05D001406 ORTHO05D006300 1.4e-36 156.4 114 64.0
FAN12G4194 Fragaria x ananassa HOM05D001406 ORTHO05D006300 1.4e-36 156.4 114 64.0
Actinidia00013 Actinidia chinensis HOM05D001406 ORTHO05D006300 5.2e-36 154.5 114 67.5
Cpa.g.sc16.181 Carica papaya HOM05D001406 ORTHO05D006300 5.2e-36 154.5 114 65.8
CsaV3_UNG067560 Cucumis sativus L. HOM05D001406 ORTHO05D006300 5.2e-36 154.5 114 68.4
CsaV3_UNG225770 Cucumis sativus L. HOM05D001406 ORTHO05D006300 5.2e-36 154.5 114 68.4
Nitab4.5_0003466g0080 Nicotiana tabacum HOM05D001406 ORTHO05D006300 5.2e-36 154.5 116 62.9
PSO210G3685 Papaver somniferum HOM05D001406 ORTHO05D006300 5.2e-36 154.5 113 67.3
ClCG06G005070 Citrullus lanatus HOM05D001406 ORTHO05D006300 6.8e-36 154.1 114 67.5
Solyc12g099510.3 Solanum lycopersicum HOM05D001406 ORTHO05D006300 8.9e-36 153.7 114 64.9
Sopen12g034190 Solanum pennellii HOM05D001406 ORTHO05D006300 8.9e-36 153.7 114 64.9
PGSC0003DMG401004707 Solanum tuberosum HOM05D001406 ORTHO05D006300 8.9e-36 153.7 114 64.9
DCAR_002468 Daucus carota HOM05D001406 ORTHO05D006300 1.2e-35 153.3 114 64.9
CsaV3_UNG044300 Cucumis sativus L. HOM05D001406 ORTHO05D006300 1.5e-35 152.9 114 67.5
HanXRQChr16g0501031 Helianthus annuus HOM05D001406 ORTHO05D006300 1.5e-35 152.9 113 69.0
Lsat_1_v5_gn_6_95741 Lactuca sativa HOM05D001406 ORTHO05D006300 1.5e-35 152.9 119 63.9
Peaxi162Scf00646g00226 Petunia axillaris HOM05D001406 ORTHO05D006300 2.6e-35 152.1 116 66.4
Sed0021428 Sechium edule HOM05D001406 ORTHO05D006300 2.6e-35 152.1 111 69.4
Aqoxy2G02952 Aquilegia oxysepala HOM05D001406 ORTHO05D006300 3.4e-35 151.8 112 65.2
Lj6g0019990 Lotus japonicus HOM05D001406 ORTHO05D006300 3.4e-35 151.8 114 65.8
vmacro15227 Vaccinium macrocarpon HOM05D001406 ORTHO05D006300 5.7e-35 151.0 115 65.2
ECA232G4578 Erigeron canadensis HOM05D001406 ORTHO05D006300 9.8e-35 150.2 113 67.3
Thhalv10024228m.g Eutrema salsugineum HOM05D001406 ORTHO05D006300 1.3e-34 149.8 114 64.0
Sp7g14340 Schrenkiella parvula HOM05D001406 ORTHO05D006300 2.2e-34 149.1 114 64.0
Actinidia14294 Actinidia chinensis HOM05D001406 ORTHO05D006300 2.8e-34 148.7 114 65.8
BcaC08g43650 Brassica carinata HOM05D001406 ORTHO05D006300 2.8e-34 148.7 114 64.0
C06p10680 Brassica napus HOM05D001406 ORTHO05D006300 2.8e-34 148.7 114 64.0
BolC6t36150H Brassica oleracea HOM05D001406 ORTHO05D006300 2.8e-34 148.7 114 64.0
BolC7t45276H Brassica oleracea HOM05D001406 ORTHO05D006300 2.8e-34 148.7 114 64.0
BraA03t14045Z Brassica rapa HOM05D001406 ORTHO05D006300 2.8e-34 148.7 114 64.0
Ah.04g153610 Amaranthus hybridus HOM05D001406 ORTHO05D006300 3.7e-34 148.3 120 63.3
BcaC06g32972 Brassica carinata HOM05D001406 ORTHO05D006300 3.7e-34 148.3 114 64.9
AUR62034308 Chenopodium quinoa HOM05D001406 ORTHO05D006300 3.7e-34 148.3 114 61.4
Rhsim02G0008400 Rhododendron simsii HOM05D001406 ORTHO05D006300 4.9e-34 147.9 114 64.0
AUR62025017 Chenopodium quinoa HOM05D001406 ORTHO05D006300 6.3e-34 147.5 114 60.5
AL7G39380 Arabidopsis lyrata HOM05D001406 ORTHO05D006300 1.4e-33 146.4 114 63.2
AT4G15890 Arabidopsis thaliana HOM05D001406 ORTHO05D006300 1.4e-33 146.4 114 62.3
A03p49440 Brassica napus HOM05D001406 ORTHO05D006300 1.4e-33 146.4 114 63.2
SGA_v2.0_scaffold67G22623 Striga asiatica HOM05D001406 ORTHO05D006300 1.8e-33 146.0 115 61.7
Aa31LG10G6250 Aethionema arabicum HOM05D001406 ORTHO05D006300 3.1e-33 145.2 114 60.5
MSTRG.3907 Avicennia marina HOM05D001406 ORTHO05D006300 4.1e-33 144.8 112 61.6
EL10Ac3g06610 Beta vulgaris HOM05D001406 ORTHO05D006300 4.1e-33 144.8 114 63.2
SalBow2G2741 Salvia bowleyana HOM05D001406 ORTHO05D006300 7.0e-33 144.1 114 59.6
PGR031G1922 Punica granatum HOM05D001406 ORTHO05D006300 1.2e-32 143.3 115 63.5
TWI53G1101 Tripterygium wilfordii HOM05D001406 ORTHO05D006300 1.2e-32 143.3 114 62.3
CARHR290420 Cardamine hirsuta HOM05D001406 ORTHO05D006300 1.6e-32 142.9 114 60.5
Sc13g0003410 Simmondsia chinensis HOM05D001406 ORTHO05D006300 1.6e-32 142.9 114 61.4
MBI19_g25352_MAGBIO Magnolia biondii HOM05D001406 ORTHO05D006300 2.7e-32 142.1 114 63.2
Carub.0007s2577 Capsella rubella HOM05D001406 ORTHO05D006300 3.5e-32 141.7 114 61.4
SHI00255 Sapria himalayana HOM05D001406 ORTHO05D006300 1.0e-31 140.2 120 56.7
unitig_37.g12399 Utricularia gibba HOM05D001406 ORTHO05D006300 1.2e-29 133.3 116 56.9
Lj6g0027272 Lotus japonicus HOM05D001406 ORTHO05D006300 8.9e-28 127.1 122 54.1
Oeu016245.1 Olea europaea HOM05D001406 ORTHO05D006300 2.9e-26 122.1 97 64.9
BcaC06g33438 Brassica carinata HOM05D001406 ORTHO05D006300 2.4e-25 119.0 114 55.3
Os12g0548100 Oryza sativa ssp. japonica HOM05D001406 ORTHO05D006300 2.4e-25 119.0 113 54.9
SEGI_32620 Sequoiadendron giganteum HOM05D001406 ORTHO05D006300 5.4e-25 117.9 120 50.0
CDE02G0109 Ceratophyllum demersum HOM05D001406 ORTHO05D006300 7.0e-25 117.5 112 56.2
DCAR_006102 Daucus carota HOM05D001406 ORTHO05D006300 9.2e-25 117.1 116 52.6
HPP92_015972 Vanilla planifolia HOM05D001406 ORTHO05D006300 9.2e-25 117.1 114 57.0
Zm00001eb410230 Zea mays HOM05D001406 ORTHO05D006300 1.6e-24 116.3 113 53.1
Eucgr.C00460 Eucalyptus grandis HOM05D001406 ORTHO05D006300 2.7e-24 115.5 114 53.5
Mapoly0098s0043 Marchantia polymorpha HOM05D001406 ORTHO05D006300 1.5e-19 99.8 109 51.4
Eucgr.C00337 Eucalyptus grandis HOM05D001406 ORTHO05D006300 3.7e-18 95.1 83 55.4
AagrBONN_evm.TU.Sc2ySwM_117.1301 Anthoceros agrestis HOM05D001406 ORTHO05D006300 8.3e-18 94.0 121 44.6
SMO144G0076 Selaginella moellendorffii HOM05D001406 ORTHO05D006300 2.8e-13 79.0 104 42.3
CBR_g31398 Chara braunii HOM05D001406 ORTHO05D006300 3.7e-10 68.6 155 29.0
vmacro11427 Vaccinium macrocarpon HOM05D000021 ORTHO05D000010 6.6e-07 57.8 49 53.1
QL06p009415 Quercus lobata HOM05D001406 ORTHO05D000006 2.5e-06 55.8 35 74.3


User provided reference genes

Program Settings