Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr4.2865 Acer truncatum HOM05D001406 ORTHO05D006300 9.1e-63 243.4 126 100.0
Atru.chr4.2868 Acer truncatum HOM05D001406 ORTHO05D006300 7.0e-47 190.7 106 95.3
Thecc.04G286100 Theobroma cacao HOM05D001406 ORTHO05D006300 2.6e-41 172.2 106 84.0
QL06p009115 Quercus lobata HOM05D001406 ORTHO05D006300 7.5e-41 170.6 106 82.1
QL06p009350 Quercus lobata HOM05D001406 ORTHO05D006300 7.5e-41 170.6 106 82.1
CiPaw.01G147700 Carya illinoinensis HOM05D001406 ORTHO05D006300 2.2e-40 169.1 106 83.0
CSS0049595 Camellia sinensis var. sinensis HOM05D001406 ORTHO05D006300 3.7e-40 168.3 106 82.1
Cfa015397 Carpinus fangiana HOM05D001406 ORTHO05D006300 1.9e-39 166.0 106 80.2
Haze_01188 Corylus avellana HOM05D001406 ORTHO05D006300 1.9e-39 166.0 106 80.2
Duzib212G0336 Durio zibethinus HOM05D001406 ORTHO05D006300 1.2e-38 163.3 106 80.2
Dinv44369 Davidia involucrata HOM05D001406 ORTHO05D006300 2.7e-38 162.2 106 78.3
Rhsim02G0008400 Rhododendron simsii HOM05D001406 ORTHO05D006300 2.7e-38 162.2 106 79.2
Actinidia00013 Actinidia chinensis HOM05D001406 ORTHO05D006300 3.5e-38 161.8 106 78.3
Cpa.g.sc16.181 Carica papaya HOM05D001406 ORTHO05D006300 3.5e-38 161.8 106 77.4
Actinidia14294 Actinidia chinensis HOM05D001406 ORTHO05D006300 1.0e-37 160.2 106 78.3
Aqoxy2G02952 Aquilegia oxysepala HOM05D001406 ORTHO05D006300 1.7e-37 159.5 106 78.3
Phvul.009G248800 Phaseolus vulgaris HOM05D001406 ORTHO05D006300 1.7e-37 159.5 106 75.5
Hund20543 Selenicereus undatus HOM05D001406 ORTHO05D006300 2.3e-37 159.1 108 76.9
TAR370G0006 Trochodendron aralioides HOM05D001406 ORTHO05D006300 2.3e-37 159.1 106 78.3
Gohir.D10G170900 Gossypium hirsutum HOM05D001406 ORTHO05D006300 3.9e-37 158.3 106 77.4
Gorai.011G191000 Gossypium raimondii HOM05D001406 ORTHO05D006300 3.9e-37 158.3 106 77.4
Potri.010G013300 Populus trichocarpa HOM05D001406 ORTHO05D006300 3.9e-37 158.3 106 74.5
Ciclev10004172m.g Citrus clementina HOM05D001406 ORTHO05D006300 5.1e-37 157.9 106 74.5
Glyma.09G044100 Glycine max HOM05D001406 ORTHO05D006300 5.1e-37 157.9 106 74.5
Hma1.2p1_1185F.1_g265020 Hydrangea macrophylla HOM05D001406 ORTHO05D006300 5.1e-37 157.9 106 76.4
Hma1.2p1_1185F.1_g265030 Hydrangea macrophylla HOM05D001406 ORTHO05D006300 5.1e-37 157.9 106 76.4
Sc13g0003410 Simmondsia chinensis HOM05D001406 ORTHO05D006300 1.1e-36 156.8 106 77.4
Glyma.15G149000 Glycine max HOM05D001406 ORTHO05D006300 1.5e-36 156.4 106 74.5
Sabra10G0008500 Salix brachista HOM05D001406 ORTHO05D006300 1.5e-36 156.4 106 74.5
GSVIVG01017722001 Vitis vinifera HOM05D001406 ORTHO05D006300 1.9e-36 156.0 106 77.4
vmacro15227 Vaccinium macrocarpon HOM05D001406 ORTHO05D006300 3.3e-36 155.2 111 74.8
VMungo1309G1537 Vigna mungo HOM05D001406 ORTHO05D006300 4.3e-36 154.8 106 72.6
Lj6C678T4 Lonicera japonica HOM05D001406 ORTHO05D006300 7.3e-36 154.1 106 75.5
Nn4g25794 Nelumbo nucifera HOM05D001406 ORTHO05D006300 7.3e-36 154.1 103 77.7
Sed0021428 Sechium edule HOM05D001406 ORTHO05D006300 1.2e-35 153.3 106 71.7
Lj6g0019990 Lotus japonicus HOM05D001406 ORTHO05D006300 1.6e-35 152.9 106 72.6
Lj6g0027272 Lotus japonicus HOM05D001406 ORTHO05D006300 1.6e-35 152.9 106 70.8
EL10Ac3g06610 Beta vulgaris HOM05D001406 ORTHO05D006300 2.1e-35 152.5 105 75.2
PSO170G4998 Papaver somniferum HOM05D001406 ORTHO05D006300 2.8e-35 152.1 106 73.6
PGR031G1922 Punica granatum HOM05D001406 ORTHO05D006300 3.6e-35 151.8 106 72.6
arahy.Tifrunner.gnm1.ann1.4JB89L Arachis hypogaea HOM05D001406 ORTHO05D006300 6.2e-35 151.0 106 69.8
arahy.Tifrunner.gnm1.ann1.Q4RDUH Arachis hypogaea HOM05D001406 ORTHO05D006300 6.2e-35 151.0 106 69.8
Eucgr.C00332 Eucalyptus grandis HOM05D001406 ORTHO05D006300 6.2e-35 151.0 106 73.6
Eucgr.C00455 Eucalyptus grandis HOM05D001406 ORTHO05D006300 6.2e-35 151.0 106 73.6
Eucgr.C00460 Eucalyptus grandis HOM05D001406 ORTHO05D006300 6.2e-35 151.0 106 73.6
PSO210G3685 Papaver somniferum HOM05D001406 ORTHO05D006300 6.2e-35 151.0 106 72.6
FvH4_4g18310 Fragaria vesca HOM05D001406 ORTHO05D006300 8.1e-35 150.6 106 72.6
FAN12G0087 Fragaria x ananassa HOM05D001406 ORTHO05D006300 8.1e-35 150.6 106 72.6
THA.LOC104821780 Tarenaya hassleriana HOM05D001406 ORTHO05D006300 1.1e-34 150.2 106 71.7
TWI53G1101 Tripterygium wilfordii HOM05D001406 ORTHO05D006300 1.1e-34 150.2 124 66.9
Atru.chr4.2862 Acer truncatum HOM05D001406 ORTHO05D006300 1.4e-34 149.8 106 79.2
RcHm_v2.0_Chr4g0422791 Rosa chinensis HOM05D001406 ORTHO05D006300 1.4e-34 149.8 106 72.6
CAN.G484.37 Capsicum annuum HOM05D001406 ORTHO05D006300 1.8e-34 149.4 106 74.5
AUR62034308 Chenopodium quinoa HOM05D001406 ORTHO05D006300 1.8e-34 149.4 105 74.3
Ah.04g153610 Amaranthus hybridus HOM05D001406 ORTHO05D006300 2.3e-34 149.1 105 73.3
AUR62025017 Chenopodium quinoa HOM05D001406 ORTHO05D006300 2.3e-34 149.1 105 74.3
Nitab4.5_0000570g0200 Nicotiana tabacum HOM05D001406 ORTHO05D006300 2.3e-34 149.1 106 72.6
Ca_01929_v3 Cicer arietinum L. HOM05D001406 ORTHO05D006300 3.1e-34 148.7 106 70.8
Nitab4.5_0003466g0080 Nicotiana tabacum HOM05D001406 ORTHO05D006300 3.1e-34 148.7 106 72.6
FAN12G4194 Fragaria x ananassa HOM05D001406 ORTHO05D006300 4.0e-34 148.3 106 71.7
Manes.03G196500 Manihot esculenta HOM05D001406 ORTHO05D006300 4.0e-34 148.3 106 71.7
Aa31LG10G6250 Aethionema arabicum HOM05D001406 ORTHO05D006300 6.8e-34 147.5 103 75.7
HanXRQChr16g0501031 Helianthus annuus HOM05D001406 ORTHO05D006300 8.9e-34 147.1 108 71.3
Solyc12g099510.3 Solanum lycopersicum HOM05D001406 ORTHO05D006300 8.9e-34 147.1 106 72.6
Sopen12g034190 Solanum pennellii HOM05D001406 ORTHO05D006300 8.9e-34 147.1 106 72.6
PGSC0003DMG401004707 Solanum tuberosum HOM05D001406 ORTHO05D006300 8.9e-34 147.1 106 72.6
Medtr2g436590 Medicago truncatula HOM05D001406 ORTHO05D006300 2.0e-33 146.0 106 69.8
Migut.G00150 Erythranthe guttata HOM05D001406 ORTHO05D006300 2.6e-33 145.6 106 70.8
Psat1g154920 Pisum sativum HOM05D001406 ORTHO05D006300 3.4e-33 145.2 106 69.8
Sp7g14340 Schrenkiella parvula HOM05D001406 ORTHO05D006300 3.4e-33 145.2 103 73.8
MSTRG.3907 Avicennia marina HOM05D001406 ORTHO05D006300 5.8e-33 144.4 106 70.8
Carub.0007s2577 Capsella rubella HOM05D001406 ORTHO05D006300 5.8e-33 144.4 103 71.8
CARHR290420 Cardamine hirsuta HOM05D001406 ORTHO05D006300 5.8e-33 144.4 103 71.8
Thhalv10024228m.g Eutrema salsugineum HOM05D001406 ORTHO05D006300 5.8e-33 144.4 103 71.8
Lalb_Chr18g0051641 Lupinus albus HOM05D001406 ORTHO05D006300 5.8e-33 144.4 106 67.0
Prupe.1G134700 Prunus persica HOM05D001406 ORTHO05D006300 5.8e-33 144.4 106 71.7
SGA_v2.0_scaffold67G22623 Striga asiatica HOM05D001406 ORTHO05D006300 5.8e-33 144.4 106 67.9
AT4G15890 Arabidopsis thaliana HOM05D001406 ORTHO05D006300 7.6e-33 144.1 103 70.9
BcaC06g32972 Brassica carinata HOM05D001406 ORTHO05D006300 7.6e-33 144.1 103 71.8
BcaC06g33438 Brassica carinata HOM05D001406 ORTHO05D006300 7.6e-33 144.1 103 71.8
A03p49440 Brassica napus HOM05D001406 ORTHO05D006300 7.6e-33 144.1 103 71.8
C07p47490 Brassica napus HOM05D001406 ORTHO05D006300 7.6e-33 144.1 103 71.8
BolC7t45276H Brassica oleracea HOM05D001406 ORTHO05D006300 7.6e-33 144.1 103 71.8
BraA03t14045Z Brassica rapa HOM05D001406 ORTHO05D006300 7.6e-33 144.1 103 71.8
AL7G39380 Arabidopsis lyrata HOM05D001406 ORTHO05D006300 1.3e-32 143.3 103 71.8
HPP92_015972 Vanilla planifolia HOM05D001406 ORTHO05D006300 1.3e-32 143.3 105 67.6
MBI19_g25352_MAGBIO Magnolia biondii HOM05D001406 ORTHO05D006300 1.7e-32 142.9 106 68.9
TPR.G26890 Trifolium pratense HOM05D001406 ORTHO05D006300 1.7e-32 142.9 106 67.9
Lsat_1_v5_gn_6_95741 Lactuca sativa HOM05D001406 ORTHO05D006300 2.9e-32 142.1 108 69.4
CANSAT78G1952 Cannabis sativa HOM05D001406 ORTHO05D006300 3.7e-32 141.7 106 69.8
MD16G1167900 Malus domestica HOM05D001406 ORTHO05D006300 3.7e-32 141.7 106 68.9
ECA232G4578 Erigeron canadensis HOM05D001406 ORTHO05D006300 6.4e-32 141.0 108 69.4
Oeu026316.2 Olea europaea HOM05D001406 ORTHO05D006300 8.4e-32 140.6 106 69.8
CDE02G0109 Ceratophyllum demersum HOM05D001406 ORTHO05D006300 3.2e-31 138.7 106 66.0
BcaC08g43650 Brassica carinata HOM05D001406 ORTHO05D006300 5.4e-31 137.9 103 68.9
C06p10680 Brassica napus HOM05D001406 ORTHO05D006300 5.4e-31 137.9 103 68.9
BolC6t36150H Brassica oleracea HOM05D001406 ORTHO05D006300 5.4e-31 137.9 103 68.9
SalBow2G2741 Salvia bowleyana HOM05D001406 ORTHO05D006300 5.4e-31 137.9 106 68.9
Zm00001eb410230 Zea mays HOM05D001406 ORTHO05D006300 5.4e-31 137.9 103 68.0
Peaxi162Scf00646g00226 Petunia axillaris HOM05D001406 ORTHO05D006300 2.7e-30 135.6 106 67.0
unitig_37.g12399 Utricularia gibba HOM05D001406 ORTHO05D006300 4.3e-28 128.3 107 61.7
MELO3C021323.2 Cucumis melo HOM05D001406 ORTHO05D006300 6.2e-27 124.4 104 62.5
ClCG06G005070 Citrullus lanatus HOM05D001406 ORTHO05D006300 6.8e-26 120.9 106 62.3
SEGI_32620 Sequoiadendron giganteum HOM05D001406 ORTHO05D006300 1.5e-25 119.8 103 62.1
Cc03_g01780 Coffea canephora HOM05D001406 ORTHO05D006300 8.4e-24 114.0 122 56.6
SMO144G0076 Selaginella moellendorffii HOM05D001406 ORTHO05D006300 1.9e-23 112.8 107 57.0
DCAR_002468 Daucus carota HOM05D001406 ORTHO05D006300 2.4e-23 112.5 106 56.6
CsaV3_UNG044300 Cucumis sativus L. HOM05D001406 ORTHO05D006300 7.1e-23 110.9 104 56.7
CsaV3_UNG225770 Cucumis sativus L. HOM05D001406 ORTHO05D006300 7.1e-23 110.9 104 56.7
AagrBONN_evm.TU.Sc2ySwM_117.1301 Anthoceros agrestis HOM05D001406 ORTHO05D006300 1.2e-22 110.2 107 56.1
Gohir.A10G164700 Gossypium hirsutum HOM05D001406 ORTHO05D006300 2.7e-22 109.0 106 59.4
Os12g0548100 Oryza sativa ssp. japonica HOM05D001406 ORTHO05D006300 3.5e-22 108.6 114 51.8
SHI00255 Sapria himalayana HOM05D001406 ORTHO05D006300 1.1e-20 103.6 113 53.1
Eucgr.C00337 Eucalyptus grandis HOM05D001406 ORTHO05D006300 1.9e-15 86.3 64 68.8
CBR_g31398 Chara braunii HOM05D001406 ORTHO05D006300 5.4e-15 84.7 104 48.1
Medtr7g110590 Medicago truncatula HOM05D001406 ORTHO05D006300 2.3e-13 79.3 57 70.2
Mapoly0098s0043 Marchantia polymorpha HOM05D001406 ORTHO05D006300 3.0e-13 79.0 104 45.2
Oeu016245.1 Olea europaea HOM05D001406 ORTHO05D006300 1.6e-11 73.2 76 55.3
COL.COLO4_13851 Corchorus olitorius HOM05D001406 ORTHO05D006300 1.5e-09 66.6 44 75.0
Eucgr.C00258 Eucalyptus grandis HOM05D001406 ORTHO05D006300 1.3e-08 63.5 43 72.1
CsaV3_UNG067560 Cucumis sativus L. HOM05D001406 ORTHO05D006300 4.9e-08 61.6 42 69.0


User provided reference genes

Program Settings