Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr3.487 Acer truncatum HOM05D000268 ORTHO05D004469 6.6e-70 267.3 141 100.0
Ciclev10024695m.g Citrus clementina HOM05D000268 ORTHO05D004469 7.2e-32 141.0 131 61.8
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 1.2e-26 123.6 130 53.8
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 2.6e-26 122.5 130 53.1
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 4.5e-26 121.7 113 60.2
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 2.2e-25 119.4 113 60.2
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 2.9e-25 119.0 128 53.1
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 6.5e-25 117.9 113 58.4
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 1.1e-24 117.1 113 57.5
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 1.1e-24 117.1 111 60.4
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 1.4e-24 116.7 132 48.5
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 1.6e-23 113.2 130 48.5
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 1.6e-23 113.2 114 56.1
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 2.1e-23 112.8 131 46.6
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 2.3e-22 109.4 115 55.7
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 3.0e-22 109.0 117 51.3
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 5.1e-22 108.2 114 54.4
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 2.0e-21 106.3 132 45.5
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 2.0e-21 106.3 132 45.5
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 4.4e-21 105.1 132 44.7
Gohir.D03G018300 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.3e-20 103.6 132 42.4
Cpa.g.sc15.107 Carica papaya HOM05D000268 ORTHO05D004469 2.8e-20 102.4 132 44.7
FvH4_1g14350 Fragaria vesca HOM05D000268 ORTHO05D004469 2.8e-20 102.4 101 57.4
FAN19G2782 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.8e-20 102.4 101 57.4
FAN28G1810 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.8e-20 102.4 101 56.4
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 4.8e-20 101.7 112 50.9
FAN26G3224 Fragaria x ananassa HOM05D000268 ORTHO05D004469 8.2e-20 100.9 101 56.4
FAN23G1146 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.8e-19 99.8 101 56.4
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 1.8e-19 99.8 132 42.4
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 2.4e-19 99.4 101 54.5
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 6.9e-19 97.8 118 48.3
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 9.1e-19 97.4 137 42.3
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 3.4e-18 95.5 113 48.7
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 4.5e-18 95.1 113 48.7
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 1.3e-17 93.6 132 40.9
CANSAT01G2579 Cannabis sativa HOM05D000268 ORTHO05D004469 1.7e-17 93.2 101 48.5
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 3.8e-17 92.0 113 47.8
TAR625G1531 Trochodendron aralioides HOM05D000268 ORTHO05D004469 1.4e-16 90.1 121 45.5
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 1.6e-15 86.7 113 44.2
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 2.1e-15 86.3 115 47.8
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 2.1e-15 86.3 115 47.8
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 6.1e-15 84.7 114 42.1
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 6.1e-15 84.7 113 49.6
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 1.0e-14 84.0 113 44.2
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 1.4e-14 83.6 116 44.8
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 1.4e-14 83.6 113 48.7
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 2.3e-14 82.8 116 46.6
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 3.0e-14 82.4 113 43.4
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 3.9e-14 82.0 115 44.3
Sed0027730 Sechium edule HOM05D000268 ORTHO05D004469 1.5e-13 80.1 139 39.6
Lalb_Chr05g0213051 Lupinus albus HOM05D000268 ORTHO05D004469 2.0e-13 79.7 113 40.7
Nitab4.5_0000483g0060 Nicotiana tabacum HOM05D000268 ORTHO05D004469 2.6e-13 79.3 103 45.6
Peaxi162Scf00535g00417 Petunia axillaris HOM05D000268 ORTHO05D004469 3.3e-13 79.0 102 45.1
CAN.G836.12 Capsicum annuum HOM05D000268 ORTHO05D004469 1.3e-12 77.0 102 45.1
CsaV3_6G042640 Cucumis sativus L. HOM05D000268 ORTHO05D004469 1.3e-12 77.0 139 38.1
MELO3C007503.2 Cucumis melo HOM05D000268 ORTHO05D004469 2.8e-12 75.9 139 36.0
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 3.7e-12 75.5 89 49.4
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 4.8e-12 75.1 104 42.3
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 8.2e-12 74.3 113 41.6
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 1.8e-11 73.2 120 40.0
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 4.1e-11 72.0 113 38.9
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 9.1e-11 70.9 113 40.7
ClCG01G016320 Citrullus lanatus HOM05D000268 ORTHO05D004469 1.2e-10 70.5 139 36.0
DCAR_010955 Daucus carota HOM05D000268 ORTHO05D004469 1.2e-10 70.5 121 38.0
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 2.0e-10 69.7 114 39.5
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 2.6e-10 69.3 111 36.9
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 4.5e-10 68.6 112 42.9
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 7.7e-10 67.8 101 38.6
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 1.3e-09 67.0 117 36.8
Lj7C14G2 Lonicera japonica HOM05D000268 ORTHO05D004469 1.3e-09 67.0 139 36.0
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 1.7e-09 66.6 117 36.8
AUR62008036 Chenopodium quinoa HOM05D000268 ORTHO05D004469 2.2e-09 66.2 129 41.1
AUR62003214 Chenopodium quinoa HOM05D000268 ORTHO05D004469 2.9e-09 65.9 129 40.3
PSO170G1741 Papaver somniferum HOM05D000268 ORTHO05D004469 2.9e-09 65.9 120 37.5
PSO700G0125 Papaver somniferum HOM05D000268 ORTHO05D004469 2.9e-09 65.9 102 40.2
Hund14126 Selenicereus undatus HOM05D000268 ORTHO05D004469 2.9e-09 65.9 98 40.8
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 5.0e-09 65.1 101 38.6
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 8.5e-09 64.3 96 45.8
EL10Ac6g14864 Beta vulgaris HOM05D000268 ORTHO05D004469 1.5e-08 63.5 133 35.3
PGR102G2765 Punica granatum HOM05D000268 ORTHO05D004469 1.5e-08 63.5 111 42.3
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 1.9e-08 63.2 122 36.9
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 1.9e-08 63.2 104 39.4
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 4.2e-08 62.0 96 44.8
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 4.2e-08 62.0 132 32.6
Actinidia04607 Actinidia chinensis HOM05D000268 ORTHO05D004469 5.5e-08 61.6 79 46.8
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 1.6e-07 60.1 112 39.3
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 3.6e-07 58.9 118 34.7
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 4.7e-07 58.5 101 38.6
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 1.0e-06 57.4 107 35.5
MBI16_g10970_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D004469 2.3e-06 56.2 114 36.0
Lj3g0021520 Lotus japonicus HOM05D000268 ORTHO05D004469 3.0e-06 55.8 111 34.2
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 5.2e-06 55.1 99 41.4


User provided reference genes

Program Settings