Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3577 Acer truncatum HOM05D002795 ORTHO05D052216 1.5e-165 586.3 324 100.0
Ciclev10007398m.g Citrus clementina HOM05D002795 ORTHO05D003219 8.7e-49 198.4 267 55.8
Sabra16G0237400 Salix brachista HOM05D002795 ORTHO05D003219 1.9e-35 154.1 257 46.7
Haze_09756 Corylus avellana HOM05D002795 ORTHO05D003219 1.6e-34 151.0 256 48.4
Potri.001G359700 Populus trichocarpa HOM05D002795 ORTHO05D003219 1.5e-32 144.4 259 46.7
Sabra11G0086900 Salix brachista HOM05D002795 ORTHO05D003219 1.1e-27 128.3 259 47.5
Haze_17440 Corylus avellana HOM05D002795 ORTHO05D003219 3.2e-27 126.7 256 43.8
Duzib213G0778 Durio zibethinus HOM05D002795 ORTHO05D003219 2.7e-26 123.6 268 41.8
Manes.15G065000 Manihot esculenta HOM05D002795 ORTHO05D003219 2.7e-26 123.6 253 39.9
Manes.03G135240 Manihot esculenta HOM05D002795 ORTHO05D003219 7.9e-26 122.1 250 40.0
Manes.03G135300 Manihot esculenta HOM05D002795 ORTHO05D003219 7.9e-26 122.1 250 40.0
Cfa020264 Carpinus fangiana HOM05D002795 ORTHO05D003219 1.8e-25 120.9 256 45.3
Potri.011G092700 Populus trichocarpa HOM05D002795 ORTHO05D003219 8.7e-25 118.6 260 46.2
Duzib170G0878 Durio zibethinus HOM05D002795 ORTHO05D003219 1.1e-24 118.2 269 44.6
Gohir.A04G011200 Gossypium hirsutum HOM05D002795 ORTHO05D003219 4.3e-24 116.3 268 43.3
vmacro09681 Vaccinium macrocarpon HOM05D002795 ORTHO05D003219 8.2e-23 112.1 314 37.6
TWI39G0959 Tripterygium wilfordii HOM05D002795 ORTHO05D003219 1.8e-22 110.9 232 49.6
Dinv39534 Davidia involucrata HOM05D002795 ORTHO05D003219 5.9e-21 105.9 285 36.8
ClCG10G004900 Citrullus lanatus HOM05D002795 ORTHO05D003219 1.0e-20 105.1 261 39.8
COL.COLO4_09748 Corchorus olitorius HOM05D002795 ORTHO05D003219 1.3e-20 104.8 283 42.0
CiPaw.11G196000 Carya illinoinensis HOM05D002795 ORTHO05D003219 8.5e-20 102.1 249 37.8
CiPaw.12G134500 Carya illinoinensis HOM05D002795 ORTHO05D003219 8.5e-20 102.1 270 41.1
Gorai.009G444700 Gossypium raimondii HOM05D002795 ORTHO05D003219 8.5e-20 102.1 263 40.7
Actinidia00112 Actinidia chinensis HOM05D002795 ORTHO05D003219 2.5e-19 100.5 289 36.3
Lalb_Chr01g0000731 Lupinus albus HOM05D002795 ORTHO05D003219 4.2e-19 99.8 269 38.7
Gohir.A11G277900 Gossypium hirsutum HOM05D002795 ORTHO05D003219 7.2e-19 99.0 268 41.8
QL08p008078 Quercus lobata HOM05D002795 ORTHO05D003219 7.2e-19 99.0 345 36.5
Sed0024196 Sechium edule HOM05D002795 ORTHO05D003219 7.2e-19 99.0 257 38.5
CANSAT01G2851 Cannabis sativa HOM05D002795 ORTHO05D003219 9.4e-19 98.6 270 35.9
vmacro11579 Vaccinium macrocarpon HOM05D002795 ORTHO05D003219 9.4e-19 98.6 286 33.9
MELO3C014153.2 Cucumis melo HOM05D002795 ORTHO05D003219 1.2e-18 98.2 264 38.3
Glyma.09G223300 Glycine max HOM05D002795 ORTHO05D003219 1.2e-18 98.2 271 38.0
TAR629G2970 Trochodendron aralioides HOM05D002795 ORTHO05D003219 2.1e-18 97.4 279 37.3
THA.LOC104811639 Tarenaya hassleriana HOM05D002795 ORTHO05D003219 2.7e-18 97.1 274 38.0
MD13G1176900 Malus domestica HOM05D002795 ORTHO05D003219 4.6e-18 96.3 274 39.8
CSS0036752 Camellia sinensis var. sinensis HOM05D002795 ORTHO05D003219 8.8e-17 92.0 281 35.9
TWI38G1047 Tripterygium wilfordii HOM05D002795 ORTHO05D003219 1.5e-16 91.3 164 51.8
Actinidia10757 Actinidia chinensis HOM05D001954 ORTHO05D001966 2.0e-16 90.9 289 34.9
Gohir.D05G377000 Gossypium hirsutum HOM05D002795 ORTHO05D003219 2.0e-16 90.9 268 38.8
PGR083G1761 Punica granatum HOM05D002795 ORTHO05D003219 2.0e-16 90.9 276 35.1
CsaV3_3G004550 Cucumis sativus L. HOM05D002795 ORTHO05D003219 2.5e-16 90.5 265 38.5
Gohir.D11G288000 Gossypium hirsutum HOM05D002795 ORTHO05D003219 5.7e-16 89.4 258 39.9
Gorai.007G311800 Gossypium raimondii HOM05D002795 ORTHO05D003219 5.7e-16 89.4 258 39.9
Glyma.12G013600 Glycine max HOM05D002795 ORTHO05D003219 2.2e-15 87.4 272 38.6
Nn6g32024 Nelumbo nucifera HOM05D002795 ORTHO05D003219 2.2e-15 87.4 279 35.5
TAR627G0024 Trochodendron aralioides HOM05D002795 ORTHO05D003219 4.8e-15 86.3 262 34.4
Sed0015832 Sechium edule HOM05D002795 ORTHO05D003219 8.2e-15 85.5 256 40.2
Lalb_Chr01g0020751 Lupinus albus HOM05D002795 ORTHO05D003219 2.4e-14 84.0 261 37.5
Migut.K00523 Erythranthe guttata HOM05D002795 ORTHO05D003219 4.1e-14 83.2 269 36.1
Lju470A12T60 Lonicera japonica HOM05D002795 ORTHO05D003219 6.9e-14 82.4 278 33.8
CSS0043408 Camellia sinensis var. sinensis HOM05D002795 ORTHO05D003219 1.5e-13 81.3 319 32.9
Rhsim06G0224400 Rhododendron simsii HOM05D002795 ORTHO05D003219 2.6e-13 80.5 285 33.0
FAN17G1079 Fragaria x ananassa HOM05D002795 ORTHO05D003219 4.5e-13 79.7 262 34.7
FvH4_4g16730 Fragaria vesca HOM05D002795 ORTHO05D003219 1.0e-12 78.6 249 36.1
CARHR268670 Cardamine hirsuta HOM05D002795 ORTHO05D003219 1.3e-12 78.2 272 33.8
RcHm_v2.0_Chr4g0420301 Rosa chinensis HOM05D002795 ORTHO05D003219 1.7e-12 77.8 249 35.3
FAN12G3602 Fragaria x ananassa HOM05D002795 ORTHO05D003219 2.9e-12 77.0 249 35.7
Lj3g0005033 Lotus japonicus HOM05D002795 ORTHO05D003219 2.9e-12 77.0 270 38.1
Hma1.2p1_0023F.1_g015630 Hydrangea macrophylla HOM05D002795 ORTHO05D003219 3.8e-12 76.6 251 35.9
FAN12G3271 Fragaria x ananassa HOM05D002795 ORTHO05D003219 5.0e-12 76.3 249 35.7
Carub.0008s1563 Capsella rubella HOM05D002795 ORTHO05D003219 6.5e-12 75.9 262 33.6
Thhalv10012622m.g Eutrema salsugineum HOM05D002795 ORTHO05D003219 8.5e-12 75.5 274 33.6
VMungo1127G1855 Vigna mungo HOM05D002795 ORTHO05D003219 8.5e-12 75.5 271 35.8
MSTRG.19560 Avicennia marina HOM05D002795 ORTHO05D003219 1.1e-11 75.1 273 34.1
Carub.0008s1565 Capsella rubella HOM05D002795 ORTHO05D003219 1.1e-11 75.1 273 32.6
Thecc.07G025700 Theobroma cacao HOM05D002795 ORTHO05D003219 1.1e-11 75.1 156 46.2
Ca_07011_v3 Cicer arietinum L. HOM05D002795 ORTHO05D003219 1.4e-11 74.7 269 36.1
AT5G55300 Arabidopsis thaliana HOM05D002795 ORTHO05D003219 2.5e-11 73.9 262 31.3
FAN07G2479 Fragaria x ananassa HOM05D002795 ORTHO05D003219 3.2e-11 73.6 249 35.3
Sp6g17230 Schrenkiella parvula HOM05D002795 ORTHO05D003219 3.2e-11 73.6 271 31.4
A02p09750 Brassica napus HOM05D002795 ORTHO05D003219 4.2e-11 73.2 267 32.6
Ca_19619_v3 Cicer arietinum L. HOM05D002795 ORTHO05D003219 4.2e-11 73.2 272 37.9
FAN22G1485 Fragaria x ananassa HOM05D002795 ORTHO05D003219 5.5e-11 72.8 249 34.5
SalBow6G3031 Salvia bowleyana HOM05D002795 ORTHO05D003219 5.5e-11 72.8 269 36.1
Eucgr.C00402 Eucalyptus grandis HOM05D002795 ORTHO05D003219 2.1e-10 70.9 269 36.4
Aqoxy7G00643 Aquilegia oxysepala HOM05D002795 ORTHO05D003219 3.6e-10 70.1 256 32.4
Duzib268G1883 Durio zibethinus HOM05D002795 ORTHO05D003219 3.6e-10 70.1 278 36.3
CARHR268650 Cardamine hirsuta HOM05D002795 ORTHO05D003219 4.7e-10 69.7 268 31.0
PSO302G0116 Papaver somniferum HOM05D002795 ORTHO05D003219 4.7e-10 69.7 230 34.8
AT5G55310 Arabidopsis thaliana HOM05D002795 ORTHO05D003219 6.1e-10 69.3 271 32.5
BcaC04g20251 Brassica carinata HOM05D002795 ORTHO05D003219 6.1e-10 69.3 195 34.9
C09p45690 Brassica napus HOM05D002795 ORTHO05D003219 6.1e-10 69.3 195 34.9
BolC9t57457H Brassica oleracea HOM05D002795 ORTHO05D003219 6.1e-10 69.3 195 34.9
Phvul.011G016600 Phaseolus vulgaris HOM05D002795 ORTHO05D003219 1.0e-09 68.6 309 32.7
Psat6g102320 Pisum sativum HOM05D002795 ORTHO05D003219 1.4e-09 68.2 279 36.2
AL8G30840 Arabidopsis lyrata HOM05D002795 ORTHO05D003219 1.8e-09 67.8 268 31.3
CAN.G290.6 Capsicum annuum HOM05D002795 ORTHO05D003219 2.3e-09 67.4 264 35.2
Dinv14748 Davidia involucrata HOM05D002795 ORTHO05D003219 2.3e-09 67.4 269 35.3
BraA10t43348Z Brassica rapa HOM05D002795 ORTHO05D003219 5.1e-09 66.2 218 33.9
Thhalv10012607m.g Eutrema salsugineum HOM05D002795 ORTHO05D003219 5.1e-09 66.2 264 36.7
Cc05_g14440 Coffea canephora HOM05D002795 ORTHO05D003219 6.7e-09 65.9 266 37.6
Nn1g07378 Nelumbo nucifera HOM05D002795 ORTHO05D003219 6.7e-09 65.9 250 31.2
Atru.chr2.3345 Acer truncatum HOM05D002795 ORTHO05D052639 8.8e-09 65.5 83 56.6
Lalb_Chr03g0024291 Lupinus albus HOM05D002795 ORTHO05D003219 8.8e-09 65.5 256 31.6
Psat3g192280 Pisum sativum HOM05D002795 ORTHO05D003219 8.8e-09 65.5 259 33.2
BcaB08g35889 Brassica carinata HOM05D002795 ORTHO05D003219 2.0e-08 64.3 192 37.5
A10p12550 Brassica napus HOM05D002795 ORTHO05D003219 3.3e-08 63.5 211 34.1
Glyma.12G013500 Glycine max HOM05D002795 ORTHO05D003219 5.7e-08 62.8 145 40.7
AL8G30850 Arabidopsis lyrata HOM05D002795 ORTHO05D003219 7.4e-08 62.4 271 31.7
DCAR_008813 Daucus carota HOM05D002795 ORTHO05D003219 2.2e-07 60.8 265 30.6
Aa31LG3G11270 Aethionema arabicum HOM05D002795 ORTHO05D003219 8.2e-07 58.9 296 30.7
BcaC03g14247 Brassica carinata HOM05D002795 ORTHO05D003219 8.2e-07 58.9 296 31.4
Sp6g17220 Schrenkiella parvula HOM05D002795 ORTHO05D003219 8.2e-07 58.9 269 31.6
THA.LOC104817691 Tarenaya hassleriana HOM05D002795 ORTHO05D003219 1.1e-06 58.5 341 29.6
BolC2t07729H Brassica oleracea HOM05D002795 ORTHO05D003219 1.8e-06 57.8 296 31.1
PSO493G0011 Papaver somniferum HOM05D002795 ORTHO05D003219 4.1e-06 56.6 213 32.4
Medtr1g040355 Medicago truncatula HOM05D002795 ORTHO05D003219 9.1e-06 55.5 274 33.6


User provided reference genes

Program Settings