Gene: Sp6g17230
General Information
Structural Information
- Species Schrenkiella parvula
- Gene Identifier Sp6g17230
- Transcript Identifier Sp6g17230.1
- Gene Type Coding gene
- Location ch6-6 : 2209739-2214087 : negative
Gene Family Information
- ID HOM05D002795
- #Genes/#Species 248/99
- Phylogenetic origin
- ID ORTHO05D003219
- #Genes/#Species 237/99
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Sp6g17230.v2.2
- pacid 45082124
Descriptions
- Description K03163 - DNA topoisomerase I [EC:5.99.1.2] (TOP1)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006265 | IEA | InterPro | DNA topological change |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003917 | IEA | InterPro | DNA topoisomerase type I (single strand cut, ATP-independent) activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | IEA | InterPro | chromosome |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013499 | DNA topoisomerase I, eukaryotic-type |
| IPR013500 | DNA topoisomerase I, catalytic core, eukaryotic-type |
| IPR014711 | DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type |
| IPR011010 | DNA breaking-rejoining enzyme, catalytic core |
| IPR001631 | DNA topoisomerase I |
| IPR008336 | DNA topoisomerase I, DNA binding, eukaryotic-type |
| IPR036202 | DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamily |
| IPR013030 | DNA topoisomerase I, DNA binding, N-terminal domain 2 |
| IPR013034 | DNA topoisomerase I, DNA binding, N-terminal domain 1 |
| IPR014727 | DNA topoisomerase I, catalytic core, alpha/beta subdomain |
| IPR025834 | Topoisomerase I C-terminal domain |
| Mapman id | Description |
|---|---|
| 13.2.1.5 | Cell cycle organisation.DNA replication.preinitiation.DNA topoisomerase (TOP1) |