Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 9.9e-197 689.9 338 100.0
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 7.5e-144 514.2 343 75.5
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 9.1e-142 507.3 341 73.9
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 3.5e-141 505.4 328 76.2
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 2.5e-139 499.2 324 75.0
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 4.2e-139 498.4 316 76.9
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 1.2e-138 496.9 335 73.4
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 4.7e-138 495.0 340 73.8
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.0e-137 493.8 343 72.9
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 1.0e-137 493.8 342 72.5
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 1.0e-137 493.8 340 74.4
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 1.4e-137 493.4 339 72.6
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 1.8e-137 493.0 343 72.6
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 6.8e-137 491.1 343 72.6
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 2.0e-136 489.6 319 75.9
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 7.5e-136 487.6 344 70.9
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 2.2e-135 486.1 322 74.2
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 4.8e-135 485.0 321 72.6
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 6.3e-135 484.6 341 72.7
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 1.8e-134 483.0 341 71.6
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 2.4e-134 482.6 326 73.6
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 3.1e-134 482.3 319 74.3
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 3.1e-134 482.3 324 74.4
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 5.4e-134 481.5 310 75.8
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 1.6e-133 479.9 321 73.8
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 4.5e-133 478.4 317 74.1
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 5.9e-133 478.0 322 74.2
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 1.0e-132 477.2 340 69.4
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 2.2e-132 476.1 341 69.5
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 2.9e-132 475.7 316 73.7
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 1.5e-131 473.4 321 72.3
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 1.5e-131 473.4 324 73.5
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 4.2e-131 471.9 320 71.6
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 5.5e-131 471.5 324 71.3
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 7.2e-131 471.1 312 74.0
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 2.1e-130 469.5 319 72.7
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 2.1e-130 469.5 320 71.2
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 3.6e-130 468.8 340 68.8
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 1.0e-129 467.2 340 68.5
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 5.2e-129 464.9 338 68.9
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 2.0e-128 463.0 314 70.4
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 2.0e-128 463.0 342 69.0
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 5.7e-128 461.5 341 69.2
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 1.3e-127 460.3 326 69.6
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 1.3e-127 460.3 324 69.8
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 6.3e-127 458.0 315 72.7
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 1.1e-126 457.2 329 70.8
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 1.1e-126 457.2 312 71.8
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 9.2e-126 454.1 334 68.3
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 9.2e-126 454.1 334 67.7
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 2.0e-125 453.0 323 70.6
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 5.9e-125 451.4 341 66.0
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 1.0e-124 450.7 329 68.1
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 1.3e-124 450.3 327 67.6
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 2.3e-124 449.5 323 71.8
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 2.9e-124 449.1 312 69.6
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 4.3e-123 445.3 343 66.5
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 5.6e-123 444.9 322 68.9
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 1.2e-122 443.7 324 69.8
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 5.2e-121 438.3 266 77.8
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 6.8e-121 438.0 316 68.0
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 1.2e-120 437.2 332 65.7
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 2.0e-120 436.4 334 66.2
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 1.7e-119 433.3 306 70.3
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 1.7e-119 433.3 306 70.3
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 2.9e-119 432.6 332 66.9
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.9e-119 432.6 288 71.2
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 4.9e-119 431.8 324 67.6
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 8.3e-119 431.0 332 65.7
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 2.4e-118 429.5 232 89.2
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 3.2e-118 429.1 331 65.6
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 5.4e-118 428.3 322 67.7
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 7.0e-118 427.9 306 69.3
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 7.0e-118 427.9 306 69.3
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 9.2e-118 427.6 306 69.3
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 7.8e-117 424.5 284 71.1
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 3.0e-116 422.5 336 66.1
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 3.0e-116 422.5 335 65.1
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 5.0e-116 421.8 311 67.5
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 6.6e-116 421.4 336 66.1
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 6.6e-116 421.4 288 71.2
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 6.6e-116 421.4 326 67.5
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 8.6e-116 421.0 308 69.5
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 1.5e-115 420.2 271 73.1
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 7.3e-115 417.9 324 67.3
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 1.6e-114 416.8 320 63.4
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 2.1e-114 416.4 334 64.4
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 2.8e-114 416.0 246 80.1
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 1.5e-112 410.2 316 65.8
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 4.9e-111 405.2 311 64.3
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 1.1e-110 404.1 333 63.1
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.6e-109 400.2 270 70.0
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 5.0e-108 395.2 331 62.2
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 3.6e-106 389.0 340 61.2
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.1e-105 387.5 301 65.8
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 1.2e-104 384.0 238 76.1
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 2.6e-104 382.9 217 82.9
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 3.3e-99 365.9 308 60.1
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 7.8e-93 344.7 306 60.1
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 2.4e-86 323.2 260 58.5
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 2.1e-85 320.1 183 82.5
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 2.1e-85 320.1 183 82.5
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 2.1e-85 320.1 314 52.5
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 4.8e-82 308.9 250 65.6
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 2.3e-76 290.0 310 48.1
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 5.3e-73 278.9 197 70.1
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 7.9e-69 265.0 240 55.8
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 4.2e-62 242.7 150 78.7
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 1.6e-61 240.7 189 58.7
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 4.6e-53 212.6 201 54.2
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 2.9e-39 166.8 166 48.8
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 2.2e-31 140.6 151 51.0
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 1.1e-30 138.3 78 80.8
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 7.7e-24 115.5 139 48.2
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 1.2e-19 101.7 59 79.7
Sed0001393 Sechium edule HOM05D006818 ORTHO05D372820 3.5e-08 63.5 248 28.6
SEGI_26249 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 3.5e-08 63.5 52 59.6
MD02G1010500 Malus domestica HOM05D003204 ORTHO05D003566 5.9e-08 62.8 171 29.2
Atru.chr7.159 Acer truncatum HOM05D003204 ORTHO05D003566 1.0e-07 62.0 170 28.8
Sopen07g001560 Solanum pennellii HOM05D003204 ORTHO05D003566 2.3e-07 60.8 169 32.5
CAN.G520.7 Capsicum annuum HOM05D003204 ORTHO05D003566 2.9e-07 60.5 177 32.2
Lalb_Chr07g0179701 Lupinus albus HOM05D003204 ORTHO05D003566 2.9e-07 60.5 171 29.8
FvH4_1g01260 Fragaria vesca HOM05D003204 ORTHO05D003566 5.0e-07 59.7 171 31.0
Manes.06G038651 Manihot esculenta HOM05D003204 ORTHO05D003566 6.6e-07 59.3 171 28.1
Solyc07g005210.3 Solanum lycopersicum HOM05D003204 ORTHO05D003566 6.6e-07 59.3 169 32.0
Mapoly0161s0027 Marchantia polymorpha HOM05D003204 ORTHO05D003566 8.6e-07 58.9 174 30.5
PGSC0003DMG400003187 Solanum tuberosum HOM05D003204 ORTHO05D003566 8.6e-07 58.9 169 32.5
VMungo1309G2170 Vigna mungo HOM05D003204 ORTHO05D003566 8.6e-07 58.9 170 28.2
BcaB08g36152 Brassica carinata HOM05D003204 ORTHO05D003566 1.1e-06 58.5 170 28.2
Solyc12g010320.2 Solanum lycopersicum HOM05D003204 ORTHO05D003566 1.1e-06 58.5 172 30.2
Sopen12g005200 Solanum pennellii HOM05D003204 ORTHO05D003566 1.1e-06 58.5 172 30.2
Sp6g19740 Schrenkiella parvula HOM05D003204 ORTHO05D003566 1.5e-06 58.2 167 29.9
Eucgr.C04044 Eucalyptus grandis HOM05D003204 ORTHO05D003566 1.9e-06 57.8 171 29.8
Eucgr.L00627 Eucalyptus grandis HOM05D003204 ORTHO05D003566 1.9e-06 57.8 171 29.8
arahy.Tifrunner.gnm1.ann1.I77GVJ Arachis hypogaea HOM05D003204 ORTHO05D003566 2.5e-06 57.4 171 29.8
CAN.G551.27 Capsicum annuum HOM05D003204 ORTHO05D003566 2.5e-06 57.4 172 29.1
FAN26G1065 Fragaria x ananassa HOM05D003204 ORTHO05D003566 2.5e-06 57.4 168 31.5
Lalb_Chr13g0301021 Lupinus albus HOM05D003204 ORTHO05D003566 2.5e-06 57.4 167 29.9
Os02g0612900 Oryza sativa ssp. japonica HOM05D003204 ORTHO05D003566 2.5e-06 57.4 186 29.6
BraA10t43619Z Brassica rapa HOM05D003204 ORTHO05D003566 4.3e-06 56.6 170 27.6
BcaC04g19909 Brassica carinata HOM05D003204 ORTHO05D003566 5.6e-06 56.2 170 27.6
C09p49990 Brassica napus HOM05D003204 ORTHO05D003566 5.6e-06 56.2 170 27.6
BolC9t57852H Brassica oleracea HOM05D003204 ORTHO05D003566 5.6e-06 56.2 170 27.6
Ca_21107_v3 Cicer arietinum L. HOM05D003204 ORTHO05D003566 5.6e-06 56.2 170 25.3
Eucgr.C00377 Eucalyptus grandis HOM05D003204 ORTHO05D003566 5.6e-06 56.2 167 29.9
MD15G1155500 Malus domestica HOM05D003204 ORTHO05D003566 5.6e-06 56.2 171 29.8
Manes.14G141400 Manihot esculenta HOM05D003204 ORTHO05D003566 7.3e-06 55.8 184 27.7
C02p13620 Brassica napus HOM05D003204 ORTHO05D003566 9.5e-06 55.5 170 28.2


User provided reference genes

Program Settings