Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr2.132 Acer truncatum HOM05D006444 ORTHO05D007748 3.3e-192 674.9 340 100.0
Dinv30860 Davidia involucrata HOM05D006444 ORTHO05D007748 3.2e-102 375.9 333 61.0
Ciclev10001747m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.1e-99 367.5 339 57.8
Sabra05G0026600 Salix brachista HOM05D006444 ORTHO05D007748 4.3e-99 365.5 333 59.8
Thecc.05G319500 Theobroma cacao HOM05D006444 ORTHO05D007748 4.3e-99 365.5 333 58.3
Potri.005G020600 Populus trichocarpa HOM05D006444 ORTHO05D007748 7.3e-99 364.8 333 58.9
Manes.09G174800 Manihot esculenta HOM05D006444 ORTHO05D007748 1.1e-97 360.9 336 56.5
Haze_04092 Corylus avellana HOM05D006444 ORTHO05D007748 1.4e-97 360.5 335 58.2
GSVIVG01031202001 Vitis vinifera HOM05D006444 ORTHO05D007748 9.0e-97 357.8 327 56.9
Rhsim11G0093000 Rhododendron simsii HOM05D006444 ORTHO05D007748 1.5e-96 357.1 334 57.8
Gohir.A08G207200 Gossypium hirsutum HOM05D006444 ORTHO05D007748 1.7e-95 353.6 333 57.1
vmacro01541 Vaccinium macrocarpon HOM05D006444 ORTHO05D007748 3.8e-95 352.4 334 56.3
Eucgr.H03280 Eucalyptus grandis HOM05D006444 ORTHO05D007748 1.9e-94 350.1 345 56.8
COL.COLO4_04127 Corchorus olitorius HOM05D006444 ORTHO05D007748 7.1e-94 348.2 332 56.3
CSS0047685 Camellia sinensis var. sinensis HOM05D006444 ORTHO05D007748 9.3e-94 347.8 333 56.2
ClCG03G017520 Citrullus lanatus HOM05D006444 ORTHO05D007748 3.9e-92 342.4 333 53.5
Gorai.004G237700 Gossypium raimondii HOM05D006444 ORTHO05D007748 1.5e-91 340.5 333 55.3
Gohir.D08G223800 Gossypium hirsutum HOM05D006444 ORTHO05D007748 3.3e-91 339.3 333 55.3
CiPaw.07G026800 Carya illinoinensis HOM05D006444 ORTHO05D007748 6.2e-90 335.1 321 56.7
Medtr7g112320 Medicago truncatula HOM05D006444 ORTHO05D007748 1.1e-89 334.3 328 54.0
Sed0009356 Sechium edule HOM05D006444 ORTHO05D007748 5.3e-89 332.0 332 53.3
Prupe.6G316100 Prunus persica HOM05D006444 ORTHO05D007748 1.5e-88 330.5 335 55.2
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.0e-88 330.1 321 53.0
arahy.Tifrunner.gnm1.ann1.I0464U Arachis hypogaea HOM05D006444 ORTHO05D007748 3.4e-88 329.3 330 53.9
QL03p017976 Quercus lobata HOM05D006444 ORTHO05D007748 1.0e-87 327.8 322 55.3
Hma1.2p1_0472F.1_g159820 Hydrangea macrophylla HOM05D006444 ORTHO05D007748 2.2e-87 326.6 347 54.2
arahy.Tifrunner.gnm1.ann1.T18680 Arachis hypogaea HOM05D006444 ORTHO05D007748 2.9e-87 326.2 330 53.6
Oeu045894.1 Olea europaea HOM05D006444 ORTHO05D007748 4.9e-87 325.5 313 54.3
Nitab4.5_0014337g0020 Nicotiana tabacum HOM05D006444 ORTHO05D007748 1.1e-86 324.3 334 51.8
Peaxi162Scf00073g00128 Petunia axillaris HOM05D006444 ORTHO05D007748 1.4e-86 323.9 331 54.1
Cpa.g.sc48.132 Carica papaya HOM05D006444 ORTHO05D007748 1.9e-86 323.6 396 48.2
PGR031G3221 Punica granatum HOM05D006444 ORTHO05D007748 1.9e-86 323.6 347 52.7
Nitab4.5_0002715g0070 Nicotiana tabacum HOM05D006444 ORTHO05D007748 7.1e-86 321.6 337 51.3
MSTRG.20391 Avicennia marina HOM05D006444 ORTHO05D007748 9.3e-86 321.2 328 52.7
Oeu028007.2 Olea europaea HOM05D006444 ORTHO05D007748 2.1e-85 320.1 331 52.0
CsaV3_1G038500 Cucumis sativus L. HOM05D006444 ORTHO05D007748 7.9e-85 318.2 327 52.3
Glyma.19G230000 Glycine max HOM05D006444 ORTHO05D007748 1.8e-84 317.0 327 52.9
Ca_09322_v3 Cicer arietinum L. HOM05D006444 ORTHO05D007748 2.5e-83 313.2 343 52.2
Lalb_Chr18g0045971 Lupinus albus HOM05D006444 ORTHO05D007748 2.5e-83 313.2 339 50.7
Hund21734 Selenicereus undatus HOM05D006444 ORTHO05D007748 4.3e-83 312.4 349 51.6
Glyma.03G233000 Glycine max HOM05D006444 ORTHO05D007748 5.7e-83 312.0 330 52.7
MELO3C015276.2 Cucumis melo HOM05D006444 ORTHO05D007748 2.1e-82 310.1 327 51.1
TPR.G1652 Trifolium pratense HOM05D006444 ORTHO05D007748 1.4e-81 307.4 328 50.3
TAR365G0240 Trochodendron aralioides HOM05D006444 ORTHO05D007748 1.8e-81 307.0 359 50.4
VMungo1383G3166 Vigna mungo HOM05D006444 ORTHO05D007748 3.1e-81 306.2 328 51.2
EL10Ac4g09842 Beta vulgaris HOM05D006444 ORTHO05D007748 5.3e-81 305.4 350 49.1
Cc10_g14110 Coffea canephora HOM05D006444 ORTHO05D007748 5.3e-81 305.4 329 51.7
Phvul.001G226600 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.3e-81 305.4 332 49.4
Migut.B00986 Erythranthe guttata HOM05D006444 ORTHO05D007748 1.5e-80 303.9 352 49.4
FvH4_6g07110 Fragaria vesca HOM05D006444 ORTHO05D007748 3.4e-80 302.8 336 51.8
FAN14G0724 Fragaria x ananassa HOM05D006444 ORTHO05D007748 3.4e-80 302.8 336 51.8
TWI56G1276 Tripterygium wilfordii HOM05D006444 ORTHO05D007748 3.4e-80 302.8 334 53.9
Lj1g0016861 Lotus japonicus HOM05D006444 ORTHO05D007748 5.8e-80 302.0 340 49.7
RcHm_v2.0_Chr3g0456691 Rosa chinensis HOM05D006444 ORTHO05D007748 5.0e-79 298.9 342 51.8
Sopen01g043670 Solanum pennellii HOM05D006444 ORTHO05D007748 1.1e-78 297.7 345 50.1
FAN05G1290 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.4e-78 297.4 341 51.0
Nn3g21596 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.6e-77 293.9 348 48.0
THA.LOC104818740 Tarenaya hassleriana HOM05D006444 ORTHO05D007748 2.1e-77 293.5 324 50.3
CAN.G1273.16 Capsicum annuum HOM05D006444 ORTHO05D007748 2.7e-77 293.1 363 46.6
FAN02G1429 Fragaria x ananassa HOM05D006444 ORTHO05D007748 7.9e-77 291.6 341 51.0
SGA_v2.0_scaffold4G01962 Striga asiatica HOM05D006444 ORTHO05D007748 7.9e-77 291.6 334 49.7
PGSC0003DMG400024779 Solanum tuberosum HOM05D006444 ORTHO05D007748 8.7e-76 288.1 366 47.0
Lj5A342G70 Lonicera japonica HOM05D006444 ORTHO05D007748 4.3e-75 285.8 287 55.7
AUR62005256 Chenopodium quinoa HOM05D006444 ORTHO05D007748 3.7e-74 282.7 345 47.8
SalBow7G4019 Salvia bowleyana HOM05D006444 ORTHO05D007748 4.8e-74 282.3 315 48.6
AUR62000705 Chenopodium quinoa HOM05D006444 ORTHO05D007748 8.2e-74 281.6 317 50.5
Lsat_1_v5_gn_7_73840 Lactuca sativa HOM05D006444 ORTHO05D007748 1.4e-73 280.8 349 47.9
Nn4g25689 Nelumbo nucifera HOM05D006444 ORTHO05D007748 1.4e-73 280.8 342 48.0
Phvul.007G199800 Phaseolus vulgaris HOM05D006444 ORTHO05D007748 5.3e-73 278.9 336 49.1
VMungo0720G1741 Vigna mungo HOM05D006444 ORTHO05D007748 5.0e-71 272.3 336 47.0
CDE09G1197 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 4.2e-70 269.2 199 64.8
Glyma.10G148900 Glycine max HOM05D006444 ORTHO05D007748 2.1e-69 266.9 340 47.1
ATR0706G081 Amborella trichopoda HOM05D006444 ORTHO05D007748 2.7e-69 266.5 306 49.0
Sp2g21090 Schrenkiella parvula HOM05D006444 ORTHO05D007748 6.1e-69 265.4 319 48.3
Thhalv10004624m.g Eutrema salsugineum HOM05D006444 ORTHO05D007748 7.9e-69 265.0 319 47.3
A06p37110 Brassica napus HOM05D006444 ORTHO05D007748 1.8e-68 263.8 320 47.5
BraA06t26637Z Brassica rapa HOM05D006444 ORTHO05D007748 1.8e-68 263.8 320 47.5
AL6G38850 Arabidopsis lyrata HOM05D006444 ORTHO05D007748 3.9e-68 262.7 318 49.7
Aqoxy2G02847 Aquilegia oxysepala HOM05D006444 ORTHO05D007748 3.3e-67 259.6 216 59.3
ECA236G3124 Erigeron canadensis HOM05D006444 ORTHO05D007748 3.3e-67 259.6 320 45.6
HanXRQChr15g0495151 Helianthus annuus HOM05D006444 ORTHO05D007748 4.3e-67 259.2 344 46.8
BolC7t44660H Brassica oleracea HOM05D006444 ORTHO05D007748 5.7e-67 258.8 321 47.0
unitig_46.g18373 Utricularia gibba HOM05D006444 ORTHO05D007748 7.4e-67 258.5 336 44.3
CARHR186630 Cardamine hirsuta HOM05D006444 ORTHO05D007748 2.2e-66 256.9 320 46.2
Carub.0006s2458 Capsella rubella HOM05D006444 ORTHO05D007748 1.1e-65 254.6 314 47.5
AT5G26940 Arabidopsis thaliana HOM05D006444 ORTHO05D007748 4.1e-65 252.7 314 48.1
Aa31LG11G9750 Aethionema arabicum HOM05D006444 ORTHO05D007748 1.5e-64 250.8 328 48.2
PSO357G0038 Papaver somniferum HOM05D006444 ORTHO05D007748 2.6e-64 250.0 354 43.8
PSO170G3086 Papaver somniferum HOM05D006444 ORTHO05D007748 5.9e-64 248.8 354 43.5
CANSAT54G2069 Cannabis sativa HOM05D006444 ORTHO05D007748 1.7e-63 247.3 336 47.0
C07p41320 Brassica napus HOM05D006444 ORTHO05D007748 1.1e-62 244.6 346 43.6
Zm00001eb014130 Zea mays HOM05D006444 ORTHO05D007748 5.5e-62 242.3 252 49.6
Psat3g013840 Pisum sativum HOM05D006444 ORTHO05D007748 2.1e-61 240.4 260 50.0
Hund21730 Selenicereus undatus HOM05D006444 ORTHO05D007748 4.7e-61 239.2 212 58.5
Thecc.04G293900 Theobroma cacao HOM05D006444 ORTHO05D007748 6.1e-61 238.8 341 43.4
Ciclev10005435m.g Citrus clementina HOM05D006444 ORTHO05D007748 1.0e-60 238.0 295 47.8
CDE02G1332 Ceratophyllum demersum HOM05D006444 ORTHO05D007748 1.4e-60 237.7 263 50.2
Prupe.1G126500 Prunus persica HOM05D006444 ORTHO05D007748 2.3e-60 236.9 216 55.6
Os03g0301400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 5.1e-60 235.7 250 48.4
Sc16g0008870 Simmondsia chinensis HOM05D006444 ORTHO05D007748 6.3e-58 228.8 265 50.6
Duzib151G0636 Durio zibethinus HOM05D006444 ORTHO05D007748 7.0e-57 225.3 348 40.5
HPP92_011867 Vanilla planifolia HOM05D006444 ORTHO05D007748 9.1e-57 224.9 191 57.1
MD13G1159900 Malus domestica HOM05D006444 ORTHO05D007748 4.5e-56 222.6 219 52.1
RcHm_v2.0_Chr4g0424201 Rosa chinensis HOM05D006444 ORTHO05D007748 1.1e-51 208.0 203 54.2
Os04g0623400 Oryza sativa ssp. japonica HOM05D006444 ORTHO05D007748 2.2e-50 203.8 199 52.3
MBI19_g14287_MAGBIO Magnolia biondii HOM05D006444 ORTHO05D007748 4.1e-49 199.5 245 46.5
AagrBONN_evm.TU.Sc2ySwM_344.4230 Anthoceros agrestis HOM05D006444 ORTHO05D007748 2.7e-45 186.8 215 48.4
FAN07G1328 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.1e-41 174.9 203 45.8
SMO116G0265 Selaginella moellendorffii HOM05D006444 ORTHO05D007748 2.4e-41 173.7 199 46.2
FvH4_4g19220 Fragaria vesca HOM05D006444 ORTHO05D007748 1.3e-39 167.9 202 45.5
MD12G1208900 Malus domestica HOM05D006444 ORTHO05D007748 1.3e-39 167.9 194 51.0
Mapoly0162s0013 Marchantia polymorpha HOM05D006444 ORTHO05D007748 2.5e-38 163.7 204 44.1
Actinidia35534 Actinidia chinensis HOM05D006444 ORTHO05D007748 4.7e-37 159.5 214 48.6
SEGI_10576 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 8.8e-36 155.2 145 53.8
FAN12G3514 Fragaria x ananassa HOM05D006444 ORTHO05D007748 1.5e-35 154.5 206 42.2
FAN12G0061 Fragaria x ananassa HOM05D006444 ORTHO05D007748 2.6e-35 153.7 202 42.1
MD12G1209000 Malus domestica HOM05D006444 ORTHO05D007748 2.6e-35 153.7 134 59.7
FAN09G3591 Fragaria x ananassa HOM05D006444 ORTHO05D007748 9.8e-35 151.8 147 55.1
Pp3c18_14120 Physcomitrium patens HOM05D001061 ORTHO05D007748 6.3e-34 149.1 195 38.5
Atru.chr4.2940 Acer truncatum HOM05D006444 ORTHO05D007748 2.9e-31 140.2 121 55.4
TAR362G0047 Trochodendron aralioides HOM05D006444 ORTHO05D007748 7.2e-30 135.6 210 42.9
MCO01G157 Micromonas commoda HOM05D005236 ORTHO05D006557 4.4e-27 126.3 181 43.1
EL10Ac4g09387 Beta vulgaris HOM05D006444 ORTHO05D007748 6.2e-21 105.9 86 65.1
Actinidia35535 Actinidia chinensis HOM05D006444 ORTHO05D007748 5.2e-20 102.8 96 62.5
PRCOL_00002449 Prasinoderma coloniale HOM05D005236 ORTHO05D006557 7.8e-16 89.0 204 32.4
Cre01.g021850 Chlamydomonas reinhardtii HOM05D005236 ORTHO05D006557 2.1e-13 80.9 166 34.3
SEGI_25648 Sequoiadendron giganteum HOM05D006444 ORTHO05D007748 2.5e-06 57.4 42 69.0


User provided reference genes

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