Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr10.1746 Acer truncatum HOM05D006143 ORTHO05D007587 1.5e-264 915.6 469 100.0
GSVIVG01021150001 Vitis vinifera HOM05D006143 ORTHO05D007587 1.1e-150 537.3 473 59.6
Duzib235G0124 Durio zibethinus HOM05D006143 ORTHO05D007587 3.9e-143 512.3 460 60.2
Thecc.06G177300 Theobroma cacao HOM05D006143 ORTHO05D007587 1.5e-142 510.4 464 60.3
CiPaw.10G054900 Carya illinoinensis HOM05D006143 ORTHO05D007587 7.4e-142 508.1 463 59.6
Ciclev10015477m.g Citrus clementina HOM05D006143 ORTHO05D007587 1.7e-141 506.9 406 65.3
Prupe.4G055900 Prunus persica HOM05D006143 ORTHO05D007587 2.4e-140 503.1 472 59.3
Manes.16G034450 Manihot esculenta HOM05D006143 ORTHO05D007587 3.2e-137 492.7 468 57.3
RcHm_v2.0_Chr5g0009801 Rosa chinensis HOM05D006143 ORTHO05D007587 6.1e-136 488.4 470 56.8
CSS0012799 Camellia sinensis var. sinensis HOM05D006143 ORTHO05D007587 1.0e-135 487.6 469 56.7
Potri.011G062100 Populus trichocarpa HOM05D006143 ORTHO05D007587 1.8e-135 486.9 462 58.0
Dinv17374 Davidia involucrata HOM05D006143 ORTHO05D007587 3.3e-134 482.6 469 58.0
MD05G1306600 Malus domestica HOM05D006143 ORTHO05D007587 2.0e-131 473.4 473 55.2
TWI63G1355 Tripterygium wilfordii HOM05D006143 ORTHO05D007587 2.0e-131 473.4 460 55.9
Sabra11G0044000 Salix brachista HOM05D006143 ORTHO05D007587 3.5e-131 472.6 457 56.5
ClCG03G007960 Citrullus lanatus HOM05D006143 ORTHO05D007587 5.0e-130 468.8 459 56.6
FvH4_7g02070 Fragaria vesca HOM05D006143 ORTHO05D007587 6.1e-128 461.8 469 54.8
FAN11G1643 Fragaria x ananassa HOM05D006143 ORTHO05D007587 1.4e-127 460.7 466 54.5
FAN03G1069 Fragaria x ananassa HOM05D006143 ORTHO05D007587 3.9e-127 459.1 477 55.1
FAN06G1438 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.8e-127 458.0 477 54.5
COL.COLO4_31385 Corchorus olitorius HOM05D006143 ORTHO05D007587 4.8e-125 452.2 439 55.1
Hma1.2p1_0155F.1_g068560 Hydrangea macrophylla HOM05D006143 ORTHO05D007587 4.1e-124 449.1 469 54.4
MELO3C002630.2 Cucumis melo HOM05D006143 ORTHO05D007587 9.1e-124 448.0 459 53.8
FAN21G2423 Fragaria x ananassa HOM05D006143 ORTHO05D007587 2.0e-123 446.8 466 53.4
Nn1g04309 Nelumbo nucifera HOM05D006143 ORTHO05D007587 3.5e-123 446.0 453 55.0
Eucgr.E03166 Eucalyptus grandis HOM05D006143 ORTHO05D007587 5.9e-123 445.3 467 52.5
Gorai.011G031600 Gossypium raimondii HOM05D006143 ORTHO05D007587 1.0e-122 444.5 463 52.5
Gohir.D10G029700 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.1e-121 441.0 463 52.3
Cpa.g.sc7.33 Carica papaya HOM05D006143 ORTHO05D007587 3.0e-119 433.0 458 53.1
FAN16G0487 Fragaria x ananassa HOM05D006143 ORTHO05D007587 8.8e-119 431.4 457 53.0
Haze_06321 Corylus avellana HOM05D006143 ORTHO05D007587 4.1e-116 422.5 477 50.9
DCAR_007976 Daucus carota HOM05D006143 ORTHO05D007587 7.2e-113 411.8 476 50.0
Glyma.07G203300 Glycine max HOM05D006143 ORTHO05D007587 7.2e-113 411.8 475 49.5
Glyma.13G172400 Glycine max HOM05D006143 ORTHO05D007587 1.0e-111 407.9 469 49.3
ECA234G2393 Erigeron canadensis HOM05D006143 ORTHO05D007587 2.0e-110 403.7 466 49.1
Sc05g0007290 Simmondsia chinensis HOM05D006143 ORTHO05D007587 2.0e-110 403.7 473 49.3
Phvul.003G056900 Phaseolus vulgaris HOM05D006143 ORTHO05D007587 3.4e-110 402.9 472 48.7
Migut.M01078 Erythranthe guttata HOM05D006143 ORTHO05D007587 5.7e-110 402.1 471 49.7
PSO832G2207 Papaver somniferum HOM05D006143 ORTHO05D007587 9.8e-110 401.4 468 49.8
Lsat_1_v5_gn_4_50941 Lactuca sativa HOM05D006143 ORTHO05D007587 1.4e-108 397.5 489 47.0
TPR.G16154 Trifolium pratense HOM05D006143 ORTHO05D007587 1.4e-108 397.5 467 46.9
Aqoxy4G00545 Aquilegia oxysepala HOM05D006143 ORTHO05D007587 1.8e-108 397.1 463 47.7
Psat7g118360 Pisum sativum HOM05D006143 ORTHO05D007587 1.8e-108 397.1 477 48.0
PGSC0003DMG400010721 Solanum tuberosum HOM05D006143 ORTHO05D007587 3.1e-108 396.4 478 49.0
Sed0020086 Sechium edule HOM05D006143 ORTHO05D007587 1.6e-107 394.0 408 54.7
Cc02_g14290 Coffea canephora HOM05D006143 ORTHO05D007587 2.0e-107 393.7 467 46.5
MBI07_g06435_MAGBIO Magnolia biondii HOM05D006143 ORTHO05D007587 2.0e-107 393.7 452 48.7
EL10Ac8g20474 Beta vulgaris HOM05D006143 ORTHO05D007587 7.7e-107 391.7 472 46.4
HanXRQChr11g0327231 Helianthus annuus HOM05D006143 ORTHO05D007587 1.0e-106 391.3 464 47.6
Oeu045072.2 Olea europaea HOM05D006143 ORTHO05D007587 3.8e-106 389.4 459 48.6
Lalb_Chr16g0384181 Lupinus albus HOM05D006143 ORTHO05D007587 5.0e-106 389.0 463 46.7
Gohir.A10G029200 Gossypium hirsutum HOM05D006143 ORTHO05D007587 1.9e-105 387.1 432 50.2
PSO210G3197 Papaver somniferum HOM05D006143 ORTHO05D007587 1.9e-105 387.1 462 49.6
PGR042G3042 Punica granatum HOM05D006143 ORTHO05D007587 1.9e-105 387.1 444 49.5
TAR626G0253 Trochodendron aralioides HOM05D006143 ORTHO05D007587 3.3e-105 386.3 336 59.5
Hund23878 Selenicereus undatus HOM05D006143 ORTHO05D007587 4.2e-105 386.0 475 46.5
Lj4g0027541 Lotus japonicus HOM05D006143 ORTHO05D007587 1.2e-104 384.4 471 46.9
THA.LOC104798414 Tarenaya hassleriana HOM05D006143 ORTHO05D007587 4.7e-104 382.5 468 47.9
Sopen02g022240 Solanum pennellii HOM05D006143 ORTHO05D007587 1.4e-103 380.9 467 48.0
arahy.Tifrunner.gnm1.ann1.W3DLTW Arachis hypogaea HOM05D006143 ORTHO05D007587 3.0e-103 379.8 462 46.8
Ah.01g004290 Amaranthus hybridus HOM05D006143 ORTHO05D007587 5.2e-103 379.0 467 45.8
arahy.Tifrunner.gnm1.ann1.VAEI8B Arachis hypogaea HOM05D006143 ORTHO05D007587 1.5e-102 377.5 468 46.6
AUR62014918 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.6e-102 376.7 473 45.5
Peaxi162Scf00875g00320 Petunia axillaris HOM05D006143 ORTHO05D007587 3.7e-101 372.9 498 46.2
Ca_26041_v3 Cicer arietinum L. HOM05D006143 ORTHO05D007587 1.4e-100 370.9 439 47.8
Solyc02g077320.4 Solanum lycopersicum HOM05D006143 ORTHO05D007587 5.4e-100 369.0 461 47.3
Medtr4g087975 Medicago truncatula HOM05D006143 ORTHO05D007587 3.5e-99 366.3 480 47.5
Aa31LG6G1190 Aethionema arabicum HOM05D006143 ORTHO05D007587 1.1e-97 361.3 455 44.8
BcaNung05875 Brassica carinata HOM05D006143 ORTHO05D007587 1.9e-97 360.5 455 45.5
CsaV3_1G012630 Cucumis sativus L. HOM05D006143 ORTHO05D007587 1.9e-97 360.5 343 57.1
Thhalv10025244m.g Eutrema salsugineum HOM05D006143 ORTHO05D007587 2.5e-97 360.1 455 45.3
FvH4_3g08270 Fragaria vesca HOM05D006143 ORTHO05D007587 7.3e-97 358.6 349 56.7
AT4G18470 Arabidopsis thaliana HOM05D006143 ORTHO05D007587 1.6e-96 357.5 456 46.9
BolC1t01214H Brassica oleracea HOM05D006143 ORTHO05D007587 2.8e-96 356.7 455 46.2
AL7G35830 Arabidopsis lyrata HOM05D006143 ORTHO05D007587 1.4e-95 354.4 457 47.0
BcaC09g51506 Brassica carinata HOM05D006143 ORTHO05D007587 2.3e-95 353.6 456 46.3
Sp7g15570 Schrenkiella parvula HOM05D006143 ORTHO05D007587 3.1e-95 353.2 456 46.1
C01p12400 Brassica napus HOM05D006143 ORTHO05D007587 4.0e-95 352.8 455 45.3
BraA01t00988Z Brassica rapa HOM05D006143 ORTHO05D007587 4.0e-95 352.8 455 45.7
Sabra11G0042500 Salix brachista HOM05D006143 ORTHO05D007587 4.0e-95 352.8 457 47.7
CARHR225290 Cardamine hirsuta HOM05D006143 ORTHO05D007587 6.8e-95 352.1 455 45.5
Medtr6g039570 Medicago truncatula HOM05D006143 ORTHO05D007587 6.8e-95 352.1 468 45.9
ATR0602G028 Amborella trichopoda HOM05D006143 ORTHO05D007587 8.9e-95 351.7 463 41.3
Carub.0007s2278 Capsella rubella HOM05D006143 ORTHO05D007587 2.4e-92 343.6 456 45.6
A01p10420 Brassica napus HOM05D006143 ORTHO05D007587 6.0e-91 339.0 480 43.3
Cfa000554 Carpinus fangiana HOM05D006143 ORTHO05D007587 2.3e-90 337.0 311 58.5
AUR62031125 Chenopodium quinoa HOM05D006143 ORTHO05D007587 2.3e-90 337.0 434 44.5
Nitab4.5_0011727g0010 Nicotiana tabacum HOM05D006143 ORTHO05D007587 2.8e-88 330.1 462 45.0
Os02g0312800 Oryza sativa ssp. japonica HOM05D006143 ORTHO05D007587 3.6e-88 329.7 453 41.7
Actinidia39490 Actinidia chinensis HOM05D006143 ORTHO05D007587 1.1e-87 328.2 464 45.0
Zm00001eb206790 Zea mays HOM05D006143 ORTHO05D007587 2.2e-85 320.5 453 41.5
SGA_v2.0_scaffold16G07658 Striga asiatica HOM05D006143 ORTHO05D007587 2.9e-85 320.1 447 42.3
Nitab4.5_0000376g0080 Nicotiana tabacum HOM05D006143 ORTHO05D007587 1.7e-82 310.8 446 43.0
VMungo0251G1209 Vigna mungo HOM05D006143 ORTHO05D007587 3.7e-77 293.1 326 50.6
Eucgr.E02653 Eucalyptus grandis HOM05D006143 ORTHO05D007587 5.4e-76 289.3 301 52.5
CDE02G0230 Ceratophyllum demersum HOM05D006143 ORTHO05D007587 6.0e-75 285.8 460 41.1
unitig_699.g19338 Utricularia gibba HOM05D006143 ORTHO05D007587 9.9e-62 241.9 459 35.3
HPP92_003901 Vanilla planifolia HOM05D006143 ORTHO05D007587 3.1e-55 220.3 322 39.4
Rhsim02G0153000 Rhododendron simsii HOM05D006143 ORTHO05D007587 2.9e-45 187.2 181 53.0
RcHm_v2.0_Chr3g0476981 Rosa chinensis HOM05D006143 ORTHO05D007587 3.0e-42 177.2 396 34.1
MD10G1285900 Malus domestica HOM05D006143 ORTHO05D007587 6.7e-34 149.4 223 43.9
arahy.Tifrunner.gnm1.ann1.74Q5DQ Arachis hypogaea HOM05D006143 ORTHO05D007587 1.5e-33 148.3 154 49.4
TPR.G16261 Trifolium pratense HOM05D006143 ORTHO05D007587 1.7e-29 134.8 195 42.6
arahy.Tifrunner.gnm1.ann1.VQL787 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.4e-28 131.7 126 53.2
arahy.Tifrunner.gnm1.ann1.RYY8E4 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-27 128.6 126 52.4
arahy.Tifrunner.gnm1.ann1.Y1II92 Arachis hypogaea HOM05D006143 ORTHO05D007587 1.2e-27 128.6 126 52.4
VMungo0251G1903 Vigna mungo HOM05D006143 ORTHO05D007587 3.0e-26 124.0 145 46.2
Mapoly0071s0015 Marchantia polymorpha HOM05D006143 ORTHO05D007587 1.3e-24 118.6 494 24.9
arahy.Tifrunner.gnm1.ann1.6ZT1I9 Arachis hypogaea HOM05D006143 ORTHO05D007587 5.3e-23 113.2 117 50.4
arahy.Tifrunner.gnm1.ann1.Y2C9I0 Arachis hypogaea HOM05D006143 ORTHO05D007587 3.4e-22 110.5 128 47.7
Nn4g22609 Nelumbo nucifera HOM05D006143 ORTHO05D007587 5.9e-22 109.8 85 69.4
SEGI_30740 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.3e-21 108.6 164 34.8
SEGI_37534 Sequoiadendron giganteum HOM05D006143 ORTHO05D007587 1.3e-21 108.6 164 34.8
Pp3c13_1090 Physcomitrium patens HOM05D006143 ORTHO05D007587 4.2e-20 103.6 425 24.9
HPP92_003867 Vanilla planifolia HOM05D006143 ORTHO05D007587 2.1e-19 101.3 260 31.5
MD10G1285700 Malus domestica HOM05D006143 ORTHO05D007587 1.4e-15 88.6 78 60.3
SHI28510 Sapria himalayana HOM05D006143 ORTHO05D007587 3.5e-14 84.0 422 23.9
AagrBONN_evm.TU.Sc2ySwM_344.2178 Anthoceros agrestis HOM05D006143 ORTHO05D007587 2.9e-13 80.9 407 24.3
SMO117G0244 Selaginella moellendorffii HOM05D006143 ORTHO05D007587 6.1e-11 73.2 457 23.0
HPP92_003900 Vanilla planifolia HOM05D006143 ORTHO05D007587 1.0e-10 72.4 115 38.3
MD10G1285800 Malus domestica HOM05D006143 ORTHO05D007587 4.4e-09 67.0 55 56.4
SEGI_26564 Sequoiadendron giganteum HOM05D001915 ORTHO05D000007 1.6e-06 58.5 111 31.5
Actinidia07619 Actinidia chinensis HOM05D006143 ORTHO05D007587 2.0e-06 58.2 113 34.5


User provided reference genes

Program Settings