Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.3875 Acer truncatum HOM05D000545 ORTHO05D000539 5.7e-50 200.7 105 100.0
Atru.chr1.3899 Acer truncatum HOM05D000545 ORTHO05D000539 5.7e-50 200.7 105 100.0
Manes.11G022300 Manihot esculenta HOM05D000545 ORTHO05D000539 2.1e-20 102.4 105 55.2
CiPaw.01G221100 Carya illinoinensis HOM05D000545 ORTHO05D000539 8.8e-19 97.1 95 58.9
QL05p008693 Quercus lobata HOM05D000545 ORTHO05D000539 1.2e-18 96.7 111 51.4
Gohir.D10G054100 Gossypium hirsutum HOM05D000545 ORTHO05D000539 4.4e-18 94.7 101 53.5
Gorai.011G057600 Gossypium raimondii HOM05D000545 ORTHO05D000539 4.4e-18 94.7 101 53.5
Duzib192G0141 Durio zibethinus HOM05D000545 ORTHO05D000539 1.3e-17 93.2 105 50.5
Ciclev10026020m.g Citrus clementina HOM05D000545 ORTHO05D000539 2.2e-17 92.4 103 55.3
RcHm_v2.0_Chr2g0144701 Rosa chinensis HOM05D000545 ORTHO05D000539 2.2e-17 92.4 105 50.5
Gohir.A10G052400 Gossypium hirsutum HOM05D000545 ORTHO05D000539 2.8e-17 92.0 100 51.0
Cpa.g.sc25.96 Carica papaya HOM05D000545 ORTHO05D000539 4.8e-17 91.3 102 52.9
Phvul.010G133300 Phaseolus vulgaris HOM05D000545 ORTHO05D000539 6.3e-17 90.9 116 49.1
Thecc.06G117600 Theobroma cacao HOM05D000545 ORTHO05D000539 2.4e-16 89.0 111 48.6
Duzib160G0266 Durio zibethinus HOM05D000545 ORTHO05D000539 3.1e-16 88.6 112 50.0
FAN05G5580 Fragaria x ananassa HOM05D000545 ORTHO05D000539 3.1e-16 88.6 105 51.4
FvH4_6g34360 Fragaria vesca HOM05D000545 ORTHO05D000539 4.1e-16 88.2 105 51.4
FAN02G0738 Fragaria x ananassa HOM05D000545 ORTHO05D000539 4.1e-16 88.2 105 51.4
FAN14G4097 Fragaria x ananassa HOM05D000545 ORTHO05D000539 1.6e-15 86.3 105 50.5
Gorai.012G010900 Gossypium raimondii HOM05D000545 ORTHO05D000539 1.6e-15 86.3 98 49.0
Prupe.3G043900 Prunus persica HOM05D000545 ORTHO05D000539 1.6e-15 86.3 105 49.5
FAN09G3653 Fragaria x ananassa HOM05D000545 ORTHO05D000539 2.0e-15 85.9 105 50.5
Duzib235G0161 Durio zibethinus HOM05D000545 ORTHO05D000539 2.7e-15 85.5 108 46.3
Gohir.D04G009100 Gossypium hirsutum HOM05D000545 ORTHO05D000539 3.5e-15 85.1 98 49.0
Gohir.A05G406500 Gossypium hirsutum HOM05D000545 ORTHO05D000539 1.0e-14 83.6 98 48.0
Lj3g0016238 Lotus japonicus HOM05D000545 ORTHO05D000539 1.0e-14 83.6 107 49.5
Glyma.07G036200 Glycine max HOM05D000545 ORTHO05D000539 2.2e-14 82.4 105 49.5
Lalb_Chr04g0263331 Lupinus albus HOM05D000545 ORTHO05D000539 2.2e-14 82.4 117 49.6
Gorai.009G143800 Gossypium raimondii HOM05D000545 ORTHO05D000539 3.8e-14 81.6 97 54.6
TWI79G1736 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 1.5e-13 79.7 116 49.1
Gohir.D05G139400 Gossypium hirsutum HOM05D000545 ORTHO05D000539 1.9e-13 79.3 97 53.6
Gohir.A05G137400 Gossypium hirsutum HOM05D000545 ORTHO05D000539 2.5e-13 79.0 102 51.0
COL.COLO4_30783 Corchorus olitorius HOM05D000545 ORTHO05D000539 4.2e-13 78.2 111 47.7
Ca_05016_v3 Cicer arietinum L. HOM05D000545 ORTHO05D000539 1.2e-12 76.6 106 50.0
MD09G1186200 Malus domestica HOM05D000545 ORTHO05D000539 1.2e-12 76.6 105 42.9
Rhsim12G0208700 Rhododendron simsii HOM05D000545 ORTHO05D000539 1.2e-12 76.6 101 45.5
Manes.04G142600 Manihot esculenta HOM05D000545 ORTHO05D000539 1.6e-12 76.3 96 51.0
TAR626G0411 Trochodendron aralioides HOM05D000545 ORTHO05D000539 1.6e-12 76.3 96 49.0
Nn8g38730 Nelumbo nucifera HOM05D000545 ORTHO05D000539 2.1e-12 75.9 107 49.5
VMungo0331G1186 Vigna mungo HOM05D000545 ORTHO05D000539 2.7e-12 75.5 105 46.7
CSS0005613 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 3.6e-12 75.1 118 44.9
CSS0042484 Camellia sinensis var. sinensis HOM05D000545 ORTHO05D000539 3.6e-12 75.1 118 44.9
vmacro17049 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 3.6e-12 75.1 99 46.5
CANSAT56G3172 Cannabis sativa HOM05D000545 ORTHO05D000539 4.7e-12 74.7 89 50.6
TAR383G0575 Trochodendron aralioides HOM05D000545 ORTHO05D000539 4.7e-12 74.7 89 49.4
TAR624G0895 Trochodendron aralioides HOM05D000545 ORTHO05D000539 1.8e-11 72.8 105 45.7
GSVIVG01016790001 Vitis vinifera HOM05D000545 ORTHO05D000539 3.0e-11 72.0 110 43.6
TAR636G3070 Trochodendron aralioides HOM05D000545 ORTHO05D000539 6.8e-11 70.9 105 46.7
Actinidia32173 Actinidia chinensis HOM05D000545 ORTHO05D000539 1.2e-10 70.1 109 45.9
Cc04_g01480 Coffea canephora HOM05D000545 ORTHO05D000539 2.6e-10 68.9 104 43.3
GSVIVG01015120001 Vitis vinifera HOM05D000545 ORTHO05D000539 7.5e-10 67.4 87 48.3
Lj3g0019233 Lotus japonicus HOM05D000545 ORTHO05D000539 1.7e-09 66.2 98 42.9
Ah.08g216620 Amaranthus hybridus HOM05D000545 ORTHO05D000539 2.2e-09 65.9 99 42.4
Thhalv10011685m.g Eutrema salsugineum HOM05D000545 ORTHO05D000539 2.8e-09 65.5 86 50.0
Hma1.2p1_0291F.1_g115250 Hydrangea macrophylla HOM05D000545 ORTHO05D000539 2.8e-09 65.5 103 43.7
Psat4g183600 Pisum sativum HOM05D000545 ORTHO05D000539 3.7e-09 65.1 113 45.1
Carub.0001s4340 Capsella rubella HOM05D000545 ORTHO05D000539 4.9e-09 64.7 86 53.5
CAN.G1542.3 Capsicum annuum HOM05D000545 ORTHO05D000539 4.9e-09 64.7 82 46.3
Hund05748 Selenicereus undatus HOM05D000545 ORTHO05D000539 4.9e-09 64.7 103 42.7
TPR.G16443 Trifolium pratense HOM05D000545 ORTHO05D000539 6.3e-09 64.3 100 47.0
vmacro22214 Vaccinium macrocarpon HOM05D000545 ORTHO05D000539 8.3e-09 63.9 107 47.7
AL1G62880 Arabidopsis lyrata HOM05D000545 ORTHO05D000539 4.1e-08 61.6 87 48.3
Nitab4.5_0006105g0020 Nicotiana tabacum HOM05D000545 ORTHO05D000539 4.1e-08 61.6 87 44.8
Peaxi162Scf00809g00019 Petunia axillaris HOM05D000545 ORTHO05D000539 4.1e-08 61.6 94 44.7
Actinidia39090 Actinidia chinensis HOM05D000545 ORTHO05D000539 5.4e-08 61.2 98 40.8
Medtr8g019540 Medicago truncatula HOM05D000545 ORTHO05D000539 7.0e-08 60.8 99 46.5
Carub.0003s1360 Capsella rubella HOM05D000545 ORTHO05D000539 9.2e-08 60.5 87 50.6
Rhsim08G0237000 Rhododendron simsii HOM05D000545 ORTHO05D000539 9.2e-08 60.5 107 42.1
TPR.G6525 Trifolium pratense HOM05D000545 ORTHO05D000539 9.2e-08 60.5 114 44.7
Nitab4.5_0003874g0020 Nicotiana tabacum HOM05D000545 ORTHO05D000539 1.2e-07 60.1 87 43.7
THA.LOC104813949 Tarenaya hassleriana HOM05D000545 ORTHO05D000539 1.2e-07 60.1 89 42.7
AT1G54160 Arabidopsis thaliana HOM05D000545 ORTHO05D000539 1.6e-07 59.7 85 43.5
Carub.0002s1967 Capsella rubella HOM05D000545 ORTHO05D000539 1.6e-07 59.7 109 39.4
Prupe.7G203500 Prunus persica HOM05D000545 ORTHO05D000539 2.0e-07 59.3 94 41.5
CiPaw.02G137100 Carya illinoinensis HOM05D000545 ORTHO05D000539 2.7e-07 58.9 102 38.2
BcaNung04892 Brassica carinata HOM05D000545 ORTHO05D000539 3.5e-07 58.5 78 50.0
A01p39600 Brassica napus HOM05D000545 ORTHO05D000539 3.5e-07 58.5 78 50.0
C01p50540 Brassica napus HOM05D000545 ORTHO05D000539 3.5e-07 58.5 78 50.0
BraA01t04000Z Brassica rapa HOM05D000545 ORTHO05D000539 3.5e-07 58.5 78 50.0
AL286U10010 Arabidopsis lyrata HOM05D000545 ORTHO05D000539 5.9e-07 57.8 86 47.7
AL3G26230 Arabidopsis lyrata HOM05D000545 ORTHO05D000539 5.9e-07 57.8 86 47.7
BcaC07g41372 Brassica carinata HOM05D000545 ORTHO05D000539 5.9e-07 57.8 103 40.8
CARHR044510 Cardamine hirsuta HOM05D000545 ORTHO05D000539 5.9e-07 57.8 86 45.3
A06p00500 Brassica napus HOM05D000545 ORTHO05D000539 7.7e-07 57.4 78 47.4
BraA06t23265Z Brassica rapa HOM05D000545 ORTHO05D000539 7.7e-07 57.4 78 47.4
AUR62009868 Chenopodium quinoa HOM05D000545 ORTHO05D000539 1.0e-06 57.0 98 41.8
Sp1g40610 Schrenkiella parvula HOM05D000545 ORTHO05D000539 1.0e-06 57.0 77 48.1
BcaB02g10858 Brassica carinata HOM05D000545 ORTHO05D000539 1.3e-06 56.6 87 44.8
BcaNung06451 Brassica carinata HOM05D000545 ORTHO05D000539 1.3e-06 56.6 77 50.6
Lj5C39T4 Lonicera japonica HOM05D000545 ORTHO05D000539 1.3e-06 56.6 95 42.1
PSO210G7033 Papaver somniferum HOM05D000545 ORTHO05D000539 1.3e-06 56.6 103 41.7
Solyc08g062210.3 Solanum lycopersicum HOM05D000545 ORTHO05D000539 1.3e-06 56.6 87 46.0
Sopen08g017820 Solanum pennellii HOM05D000545 ORTHO05D000539 1.3e-06 56.6 87 46.0
AUR62001502 Chenopodium quinoa HOM05D000545 ORTHO05D000539 1.7e-06 56.2 104 39.4
TWI32G0309 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 1.7e-06 56.2 105 38.1
BcaC08g44167 Brassica carinata HOM05D003244 ORTHO05D003645 2.3e-06 55.8 87 43.7
C06p15680 Brassica napus HOM05D003244 ORTHO05D003645 2.3e-06 55.8 87 43.7
Thhalv10021250m.g Eutrema salsugineum HOM05D000545 ORTHO05D000539 2.3e-06 55.8 89 49.4
AT1G72830 Arabidopsis thaliana HOM05D000545 ORTHO05D000539 2.9e-06 55.5 108 38.0
BolC1t05005H Brassica oleracea HOM05D000545 ORTHO05D000539 2.9e-06 55.5 78 48.7
Thhalv10018869m.g Eutrema salsugineum HOM05D000545 ORTHO05D000539 2.9e-06 55.5 108 39.8
A05p17720 Brassica napus HOM05D003244 ORTHO05D003645 3.8e-06 55.1 88 44.3
BraA05t20664Z Brassica rapa HOM05D000545 ORTHO05D000539 3.8e-06 55.1 88 44.3
CAN.G6.11 Capsicum annuum HOM05D000545 ORTHO05D000539 3.8e-06 55.1 82 43.9
MBI13_g29629_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 3.8e-06 55.1 97 41.2
C08p43770 Brassica napus HOM05D000545 ORTHO05D000539 5.0e-06 54.7 105 40.0
TWI63G1580 Tripterygium wilfordii HOM05D000545 ORTHO05D000539 5.0e-06 54.7 105 38.1
VMungo1215G2700 Vigna mungo HOM05D000545 ORTHO05D000539 5.0e-06 54.7 104 38.5
EL10Ac7g16393 Beta vulgaris HOM05D000545 ORTHO05D000539 6.6e-06 54.3 91 41.8
BolC6t36755H Brassica oleracea HOM05D000545 ORTHO05D000539 6.6e-06 54.3 87 42.5
ECA247G3873 Erigeron canadensis HOM05D000545 ORTHO05D000539 6.6e-06 54.3 93 41.9
Sp3g12270 Schrenkiella parvula HOM05D000545 ORTHO05D000539 6.6e-06 54.3 87 44.8
Aa31LG4G3170 Aethionema arabicum HOM05D000545 ORTHO05D000539 8.6e-06 53.9 96 43.8
Phvul.003G133100 Phaseolus vulgaris HOM05D000545 ORTHO05D000539 8.6e-06 53.9 110 35.5
PGSC0003DMG400021747 Solanum tuberosum HOM05D000545 ORTHO05D000539 8.6e-06 53.9 87 43.7


User provided reference genes

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