Gene: Cc04_g01480
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc04_g01480
- Transcript Identifier Cc04_g01480.1
- Gene Type Coding gene
- Location chr4 : 1172885-1178704 : positive
Gene Family Information
- ID HOM05D000545
- #Genes/#Species 1002/98
- Phylogenetic origin
- ID ORTHO05D000539
- #Genes/#Species 801/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB A5AQG5
- UniProtKB Q93ZH2
- UniProtKB B9S5T3
- UniProtKB Q9LVJ7
- UniProtKB D7TZV2
- UniProtKB Q9SYH4
- id GSCOCG00021802001
Descriptions
- Description Putative Nuclear transcription factor Y subunit A-3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0010262 | ISO | PLAZA Integrative Orthology | somatic embryogenesis | AT3G14020 |
| GO:0009738 | ISO | PLAZA Integrative Orthology | abscisic acid-activated signaling pathway | AT1G54160 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT1G54160 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G14020 |
| GO:0048316 | ISO | PLAZA Integrative Orthology | seed development | AT3G14020 |
| GO:0009785 | ISO | PLAZA Integrative Orthology | blue light signaling pathway | AT1G54160 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G54160 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G14020 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G54160 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001289 | Nuclear transcription factor Y subunit A |
| Mapman id | Description |
|---|---|
| 15.5.49.1 | RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YA |