Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr1.1100 Acer truncatum HOM05D005933 ORTHO05D007366 2.0e-129 465.7 225 100.0
QL07p000522 Quercus lobata HOM05D005933 ORTHO05D007366 7.6e-60 234.6 179 68.2
Cfa008569 Carpinus fangiana HOM05D005933 ORTHO05D007366 7.1e-58 228.0 179 67.6
Ciclev10004945m.g Citrus clementina HOM05D005933 ORTHO05D007366 7.1e-58 228.0 178 66.9
QL07p000555 Quercus lobata HOM05D005933 ORTHO05D007366 1.2e-57 227.3 182 67.6
Cpa.g.sc92.52 Carica papaya HOM05D005933 ORTHO05D007366 6.6e-56 221.5 180 63.9
Haze_19854 Corylus avellana HOM05D005933 ORTHO05D007366 1.1e-55 220.7 184 65.2
TWI74G0083 Tripterygium wilfordii HOM05D005933 ORTHO05D007366 3.3e-55 219.2 174 63.8
Eucgr.A02347 Eucalyptus grandis HOM05D005933 ORTHO05D007366 7.4e-55 218.0 179 62.6
Phvul.001G132100 Phaseolus vulgaris HOM05D005933 ORTHO05D007366 2.8e-54 216.1 178 62.9
Duzib093G2041 Durio zibethinus HOM05D005933 ORTHO05D007366 1.8e-53 213.4 178 62.4
VMungo1383G3081 Vigna mungo HOM05D005933 ORTHO05D007366 1.8e-53 213.4 178 61.2
CiPaw.08G166600 Carya illinoinensis HOM05D005933 ORTHO05D007366 2.4e-53 213.0 178 63.5
Thecc.05G153300 Theobroma cacao HOM05D005933 ORTHO05D007366 1.3e-51 207.2 179 60.9
Glyma.03G136900 Glycine max HOM05D005933 ORTHO05D007366 1.7e-51 206.8 178 61.2
CANSAT78G0457 Cannabis sativa HOM05D005933 ORTHO05D007366 2.9e-51 206.1 179 58.1
Lalb_Chr25g0287121 Lupinus albus HOM05D005933 ORTHO05D007366 8.4e-51 204.5 178 60.1
GSVIVG01033275001 Vitis vinifera HOM05D005933 ORTHO05D007366 8.4e-51 204.5 172 61.0
RcHm_v2.0_Chr3g0482381 Rosa chinensis HOM05D005933 ORTHO05D007366 1.1e-50 204.1 179 60.9
Manes.09G022000 Manihot esculenta HOM05D005933 ORTHO05D007366 5.5e-50 201.8 178 61.8
Sabra06G0036000 Salix brachista HOM05D005933 ORTHO05D007366 5.5e-50 201.8 172 61.6
Gohir.D11G173800 Gossypium hirsutum HOM05D005933 ORTHO05D007366 9.3e-50 201.1 179 60.3
Gorai.007G186200 Gossypium raimondii HOM05D005933 ORTHO05D007366 9.3e-50 201.1 179 60.3
COL.COLO4_28284 Corchorus olitorius HOM05D005933 ORTHO05D007366 1.6e-49 200.3 174 59.8
Gohir.A11G167500 Gossypium hirsutum HOM05D005933 ORTHO05D007366 1.6e-49 200.3 179 59.8
Actinidia39225 Actinidia chinensis HOM05D005933 ORTHO05D007366 2.7e-49 199.5 181 59.1
TAR633G2718 Trochodendron aralioides HOM05D005933 ORTHO05D007366 3.5e-49 199.1 179 60.9
Glyma.19G139200 Glycine max HOM05D005933 ORTHO05D007366 1.0e-48 197.6 178 58.4
Lj1g0013042 Lotus japonicus HOM05D005933 ORTHO05D007366 3.9e-48 195.7 174 58.6
Medtr7g091500 Medicago truncatula HOM05D005933 ORTHO05D007366 3.9e-48 195.7 178 56.7
FAN02G2268 Fragaria x ananassa HOM05D005933 ORTHO05D007366 8.7e-48 194.5 182 59.3
FAN05G5216 Fragaria x ananassa HOM05D005933 ORTHO05D007366 8.7e-48 194.5 172 61.6
Actinidia09329 Actinidia chinensis HOM05D005933 ORTHO05D007366 1.5e-47 193.7 181 57.5
FvH4_6g23820 Fragaria vesca HOM05D005933 ORTHO05D007366 1.5e-47 193.7 179 59.2
FAN14G1069 Fragaria x ananassa HOM05D005933 ORTHO05D007366 1.5e-47 193.7 169 61.5
Psat3g072720 Pisum sativum HOM05D005933 ORTHO05D007366 1.9e-47 193.4 180 56.1
arahy.Tifrunner.gnm1.ann1.T110QE Arachis hypogaea HOM05D005933 ORTHO05D007366 2.5e-47 193.0 178 55.6
arahy.Tifrunner.gnm1.ann1.EHL0AN Arachis hypogaea HOM05D005933 ORTHO05D007366 3.3e-47 192.6 178 55.6
CSS0022562 Camellia sinensis var. sinensis HOM05D005933 ORTHO05D007366 3.3e-47 192.6 181 55.8
PGR004G0721 Punica granatum HOM05D005933 ORTHO05D007366 3.3e-47 192.6 175 60.0
Ca_08457_v3 Cicer arietinum L. HOM05D005933 ORTHO05D007366 5.6e-47 191.8 178 56.7
Potri.006G051300 Populus trichocarpa HOM05D005933 ORTHO05D007366 2.8e-46 189.5 174 58.6
TPR.G854 Trifolium pratense HOM05D005933 ORTHO05D007366 3.7e-46 189.1 178 55.6
THA.LOC104811196 Tarenaya hassleriana HOM05D005933 ORTHO05D007366 2.4e-45 186.4 167 57.5
MD12G1074000 Malus domestica HOM05D005933 ORTHO05D007366 4.0e-45 185.7 178 56.7
Hma1.2p1_2002F.1_g310760 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 2.0e-44 183.3 168 58.9
Sp7g34530 Schrenkiella parvula HOM05D005933 ORTHO05D007366 2.0e-44 183.3 168 56.0
Hund05286 Selenicereus undatus HOM05D005933 ORTHO05D007366 2.0e-44 183.3 169 57.4
Rhsim03G0022400 Rhododendron simsii HOM05D005933 ORTHO05D007366 3.4e-44 182.6 181 54.7
Rhsim03G0021100 Rhododendron simsii HOM05D005933 ORTHO05D007366 4.5e-44 182.2 181 54.7
Thhalv10025158m.g Eutrema salsugineum HOM05D005933 ORTHO05D007366 1.0e-43 181.0 169 56.2
BcaNung04276 Brassica carinata HOM05D005933 ORTHO05D007366 3.8e-43 179.1 164 57.9
Hma1.2p1_2002F.1_g310770 Hydrangea macrophylla HOM05D005933 ORTHO05D007366 3.8e-43 179.1 183 56.3
A01p02040 Brassica napus HOM05D005933 ORTHO05D007366 8.4e-43 177.9 165 55.8
BraA01t00193Z Brassica rapa HOM05D005933 ORTHO05D007366 2.5e-42 176.4 165 55.2
Aa31LG6G13690 Aethionema arabicum HOM05D005933 ORTHO05D007366 3.2e-42 176.0 171 53.2
Lju124A41G42 Lonicera japonica HOM05D005933 ORTHO05D007366 4.2e-42 175.6 157 59.2
BcaNung03520 Brassica carinata HOM05D005933 ORTHO05D007366 7.1e-42 174.9 165 55.8
Rhsim03G0020400 Rhododendron simsii HOM05D005933 ORTHO05D007366 7.1e-42 174.9 174 54.0
Sed0001053 Sechium edule HOM05D005933 ORTHO05D007366 7.1e-42 174.9 181 54.7
BolC1t00214H Brassica oleracea HOM05D005933 ORTHO05D007366 9.3e-42 174.5 165 55.8
ECA236G1702 Erigeron canadensis HOM05D005933 ORTHO05D007366 9.3e-42 174.5 166 53.0
AL7G15130 Arabidopsis lyrata HOM05D005933 ORTHO05D007366 1.2e-41 174.1 168 54.2
AUR62026040 Chenopodium quinoa HOM05D005933 ORTHO05D007366 1.6e-41 173.7 189 50.8
C01p02220 Brassica napus HOM05D005933 ORTHO05D007366 2.7e-41 172.9 165 54.5
CARHR244310 Cardamine hirsuta HOM05D005933 ORTHO05D007366 3.5e-41 172.6 177 52.5
AT4G35910 Arabidopsis thaliana HOM05D005933 ORTHO05D007366 4.6e-41 172.2 168 54.2
DCAR_009061 Daucus carota HOM05D005933 ORTHO05D007366 4.6e-41 172.2 179 50.8
EL10Ac3g07091 Beta vulgaris HOM05D005933 ORTHO05D007366 1.0e-40 171.0 197 50.8
vmacro07854 Vaccinium macrocarpon HOM05D005933 ORTHO05D007366 1.0e-40 171.0 165 53.9
Peaxi162Scf00618g00022 Petunia axillaris HOM05D005933 ORTHO05D007366 1.3e-40 170.6 178 49.4
CsaV3_3G039700 Cucumis sativus L. HOM05D005933 ORTHO05D007366 1.8e-40 170.2 176 56.2
Carub.0007s0431 Capsella rubella HOM05D005933 ORTHO05D007366 2.3e-40 169.9 168 54.2
CAN.G128.8 Capsicum annuum HOM05D005933 ORTHO05D007366 8.7e-40 167.9 170 50.0
Solyc10g080110.3 Solanum lycopersicum HOM05D005933 ORTHO05D007366 8.7e-40 167.9 168 50.6
HanXRQChr09g0252561 Helianthus annuus HOM05D005933 ORTHO05D007366 1.1e-39 167.5 166 51.8
Lsat_1_v5_gn_8_81281 Lactuca sativa HOM05D005933 ORTHO05D007366 1.5e-39 167.2 172 54.1
PGSC0003DMG400023688 Solanum tuberosum HOM05D005933 ORTHO05D007366 1.5e-39 167.2 170 50.0
Sopen10g030730 Solanum pennellii HOM05D005933 ORTHO05D007366 1.9e-39 166.8 168 50.6
AUR62024451 Chenopodium quinoa HOM05D005933 ORTHO05D007366 2.5e-39 166.4 173 51.4
Oeu017944.1 Olea europaea HOM05D005933 ORTHO05D007366 2.5e-39 166.4 178 51.7
ClCG10G016640 Citrullus lanatus HOM05D005933 ORTHO05D007366 4.3e-39 165.6 183 54.1
Cc06_g17560 Coffea canephora HOM05D005933 ORTHO05D007366 5.7e-39 165.2 168 50.6
SalBow6G0452 Salvia bowleyana HOM05D005933 ORTHO05D007366 1.3e-38 164.1 163 54.6
MELO3C009712.2 Cucumis melo HOM05D005933 ORTHO05D007366 6.3e-38 161.8 179 54.7
MD12G1074100 Malus domestica HOM05D005933 ORTHO05D007366 8.2e-38 161.4 131 61.8
Nitab4.5_0009442g0020 Nicotiana tabacum HOM05D005933 ORTHO05D007366 8.2e-38 161.4 178 48.3
SGA_v2.0_scaffold69G23116 Striga asiatica HOM05D005933 ORTHO05D007366 8.2e-38 161.4 178 52.2
Peaxi162Scf00354g00225 Petunia axillaris HOM05D005933 ORTHO05D007366 3.1e-37 159.5 161 49.7
Sc13g0001730 Simmondsia chinensis HOM05D005933 ORTHO05D007366 4.1e-37 159.1 151 53.0
PSO782G3339 Papaver somniferum HOM05D005933 ORTHO05D007366 5.3e-37 158.7 187 48.7
MBI16_g31719_MAGBIO Magnolia biondii HOM05D005933 ORTHO05D007366 6.9e-37 158.3 193 49.2
MSTRG.19860 Avicennia marina HOM05D005933 ORTHO05D007366 2.0e-36 156.8 169 51.5
Migut.J01758 Erythranthe guttata HOM05D005933 ORTHO05D007366 3.4e-36 156.0 165 50.9
Nitab4.5_0008648g0010 Nicotiana tabacum HOM05D005933 ORTHO05D007366 3.4e-36 156.0 177 46.9
Ah.13g075070 Amaranthus hybridus HOM05D005933 ORTHO05D007366 5.0e-35 152.1 186 45.2
Atru.chr1.1098 Acer truncatum HOM05D005933 ORTHO05D007366 6.5e-35 151.8 104 73.1
Oeu008914.1 Olea europaea HOM05D005933 ORTHO05D007366 6.5e-35 151.8 178 46.6
Oeu008916.1 Olea europaea HOM05D005933 ORTHO05D007366 6.5e-35 151.8 178 46.6
Aqoxy5G03564 Aquilegia oxysepala HOM05D005933 ORTHO05D007366 1.8e-32 143.7 180 45.0
BcaNung03522 Brassica carinata HOM05D005933 ORTHO05D007366 1.9e-31 140.2 119 58.0
Dinv39604 Davidia involucrata HOM05D005933 ORTHO05D007366 3.3e-31 139.4 112 63.4
SHI32975 Sapria himalayana HOM05D005933 ORTHO05D000023 6.3e-30 135.2 121 57.9
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 4.5e-28 129.0 166 45.2
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 2.9e-27 126.3 101 64.4
Zm00001eb135000 Zea mays HOM05D005933 ORTHO05D007366 3.0e-24 116.3 180 40.0
ATR0686G233 Amborella trichopoda HOM05D005933 ORTHO05D007366 3.3e-23 112.8 180 38.9
Os12g0588900 Oryza sativa ssp. japonica HOM05D005933 ORTHO05D007366 1.4e-21 107.5 180 40.0
HPP92_017763 Vanilla planifolia HOM05D005933 ORTHO05D007366 1.5e-20 104.0 172 39.0
SEGI_18184 Sequoiadendron giganteum HOM05D005933 ORTHO05D007366 3.7e-14 82.8 191 29.8
Mapoly0165s0023 Marchantia polymorpha HOM05D005933 ORTHO05D007366 3.2e-10 69.7 199 30.7
Rhsim03G0022600 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.2e-09 67.8 66 54.5
Rhsim03G0024000 Rhododendron simsii HOM05D005933 ORTHO05D007366 1.6e-09 67.4 66 54.5
CDE09G0169 Ceratophyllum demersum HOM05D005933 ORTHO05D007366 2.7e-09 66.6 74 50.0
AagrBONN_evm.TU.Sc2ySwM_117.299 Anthoceros agrestis HOM05D005933 ORTHO05D007366 8.0e-09 65.1 177 31.6
SMO145G0218 Selaginella moellendorffii HOM05D005933 ORTHO05D007366 1.3e-06 57.8 112 37.5


User provided reference genes

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