Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G02157 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 1.5e-140 503.1 288 100.0
Aqoxy7G02158 Aquilegia oxysepala HOM05D005740 ORTHO05D007085 2.1e-83 313.2 225 72.4
Nn3g18795 Nelumbo nucifera HOM05D005740 ORTHO05D007085 3.7e-83 312.4 206 75.7
Manes.05G197600 Manihot esculenta HOM05D005740 ORTHO05D007085 5.5e-79 298.5 216 67.6
GSVIVG01038643001 Vitis vinifera HOM05D005740 ORTHO05D007085 9.3e-79 297.7 211 69.2
COL.COLO4_14370 Corchorus olitorius HOM05D005740 ORTHO05D007085 3.6e-78 295.8 206 68.9
ATR1155G047 Amborella trichopoda HOM05D005740 ORTHO05D007085 2.3e-77 293.1 218 66.5
CARHR188930 Cardamine hirsuta HOM05D005740 ORTHO05D007085 2.3e-77 293.1 211 69.2
Eucgr.A01406 Eucalyptus grandis HOM05D005740 ORTHO05D007085 2.3e-77 293.1 215 68.4
Sopen06g029440 Solanum pennellii HOM05D005740 ORTHO05D007085 3.0e-77 292.7 220 67.7
Potri.012G005800 Populus trichocarpa HOM05D005740 ORTHO05D007085 3.9e-77 292.4 206 68.9
Ciclev10021260m.g Citrus clementina HOM05D005740 ORTHO05D007085 5.1e-77 292.0 210 68.1
PGSC0003DMG400027021 Solanum tuberosum HOM05D005740 ORTHO05D007085 5.1e-77 292.0 230 65.2
PSO782G4352 Papaver somniferum HOM05D005740 ORTHO05D007085 6.7e-77 291.6 235 66.0
PGR042G0341 Punica granatum HOM05D005740 ORTHO05D007085 6.7e-77 291.6 209 67.9
TAR375G0796 Trochodendron aralioides HOM05D005740 ORTHO05D007085 8.7e-77 291.2 238 64.7
MSTRG.26978 Avicennia marina HOM05D005740 ORTHO05D007085 1.1e-76 290.8 227 66.5
CDE05G3242 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 1.1e-76 290.8 206 68.4
CSS0030523 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 2.5e-76 289.7 227 65.6
CSS0042637 Camellia sinensis var. sinensis HOM05D005740 ORTHO05D007085 4.3e-76 288.9 228 65.4
Sabra15G0001400 Salix brachista HOM05D005740 ORTHO05D007085 4.3e-76 288.9 222 64.0
Solyc06g073090.3 Solanum lycopersicum HOM05D005740 ORTHO05D007085 4.3e-76 288.9 219 67.1
Thecc.03G208700 Theobroma cacao HOM05D005740 ORTHO05D007085 4.3e-76 288.9 216 67.1
Potri.015G002200 Populus trichocarpa HOM05D005740 ORTHO05D007085 5.7e-76 288.5 207 68.1
SalBow6G1442 Salvia bowleyana HOM05D005740 ORTHO05D007085 5.7e-76 288.5 221 66.1
Cpa.g.sc3.153 Carica papaya HOM05D005740 ORTHO05D007085 7.4e-76 288.1 211 68.2
CDE02G4511 Ceratophyllum demersum HOM05D005740 ORTHO05D007085 2.2e-75 286.6 206 68.0
Thhalv10004495m.g Eutrema salsugineum HOM05D005740 ORTHO05D007085 2.2e-75 286.6 212 67.9
Nitab4.5_0000115g0060 Nicotiana tabacum HOM05D005740 ORTHO05D007085 2.8e-75 286.2 219 66.2
THA.LOC104798985 Tarenaya hassleriana HOM05D005740 ORTHO05D007085 2.8e-75 286.2 219 65.3
Duzib205G0029 Durio zibethinus HOM05D005740 ORTHO05D007085 3.7e-75 285.8 210 67.6
MD07G1298900 Malus domestica HOM05D005740 ORTHO05D007085 3.7e-75 285.8 208 68.3
PSO063G0961 Papaver somniferum HOM05D005740 ORTHO05D007085 3.7e-75 285.8 235 65.1
Haze_00297 Corylus avellana HOM05D005740 ORTHO05D007085 4.8e-75 285.4 220 65.5
ClCG02G000010 Citrullus lanatus HOM05D005740 ORTHO05D007085 8.2e-75 284.6 213 66.2
Actinidia34269 Actinidia chinensis HOM05D005740 ORTHO05D007085 1.4e-74 283.9 219 64.4
CiPaw.05G205100 Carya illinoinensis HOM05D005740 ORTHO05D007085 1.8e-74 283.5 215 65.6
Actinidia28282 Actinidia chinensis HOM05D005740 ORTHO05D007085 2.4e-74 283.1 212 67.9
arahy.Tifrunner.gnm1.ann1.88XX4I Arachis hypogaea HOM05D005740 ORTHO05D007085 2.4e-74 283.1 207 68.1
Carub.0006s2231 Capsella rubella HOM05D005740 ORTHO05D007085 2.4e-74 283.1 215 67.0
Cfa016160 Carpinus fangiana HOM05D005740 ORTHO05D007085 2.4e-74 283.1 210 67.6
arahy.Tifrunner.gnm1.ann1.2GB72X Arachis hypogaea HOM05D005740 ORTHO05D007085 3.1e-74 282.7 207 68.1
BcaNung01238 Brassica carinata HOM05D005740 ORTHO05D007085 3.1e-74 282.7 211 67.8
Sp2g22850 Schrenkiella parvula HOM05D005740 ORTHO05D007085 3.1e-74 282.7 213 66.7
FvH4_7g32900 Fragaria vesca HOM05D005740 ORTHO05D007085 4.1e-74 282.3 215 65.6
Gohir.D08G116100 Gossypium hirsutum HOM05D005740 ORTHO05D007085 5.3e-74 282.0 219 64.8
Gorai.004G125000 Gossypium raimondii HOM05D005740 ORTHO05D007085 5.3e-74 282.0 219 64.8
Nitab4.5_0002895g0020 Nicotiana tabacum HOM05D005740 ORTHO05D007085 6.9e-74 281.6 232 62.9
Phvul.009G045100 Phaseolus vulgaris HOM05D005740 ORTHO05D007085 9.0e-74 281.2 206 67.5
BraA09t36289Z Brassica rapa HOM05D005740 ORTHO05D007085 1.2e-73 280.8 209 67.9
BcaB04g19814 Brassica carinata HOM05D005740 ORTHO05D007085 1.5e-73 280.4 219 65.8
CsaV3_2G019690 Cucumis sativus L. HOM05D005740 ORTHO05D007085 2.0e-73 280.0 224 61.6
Lalb_Chr08g0239611 Lupinus albus HOM05D005740 ORTHO05D007085 2.0e-73 280.0 224 64.3
Prupe.2G318800 Prunus persica HOM05D005740 ORTHO05D007085 2.0e-73 280.0 209 68.4
MBI12_g14495_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 2.6e-73 279.6 226 64.2
HanXRQChr04g0105951 Helianthus annuus HOM05D005740 ORTHO05D007085 3.4e-73 279.3 222 64.9
AL6G36080 Arabidopsis lyrata HOM05D005740 ORTHO05D007085 4.5e-73 278.9 212 66.5
C09p07180 Brassica napus HOM05D005740 ORTHO05D007085 4.5e-73 278.9 211 66.8
A09p06460 Brassica napus HOM05D005740 ORTHO05D007085 5.9e-73 278.5 210 67.1
AT5G24490 Arabidopsis thaliana HOM05D005740 ORTHO05D007085 7.7e-73 278.1 214 66.4
BcaC04g23547 Brassica carinata HOM05D005740 ORTHO05D007085 1.0e-72 277.7 211 66.4
FAN03G0834 Fragaria x ananassa HOM05D005740 ORTHO05D007085 1.0e-72 277.7 216 65.3
FAN10G2230 Fragaria x ananassa HOM05D005740 ORTHO05D007085 1.0e-72 277.7 216 65.3
Glyma.06G136500 Glycine max HOM05D005740 ORTHO05D007085 1.3e-72 277.3 206 68.0
Lsat_1_v5_gn_9_50040 Lactuca sativa HOM05D005740 ORTHO05D007085 1.7e-72 276.9 225 63.1
SGA_v2.0_scaffold18G08464 Striga asiatica HOM05D005740 ORTHO05D007085 2.2e-72 276.6 234 63.2
Ah.07g204700 Amaranthus hybridus HOM05D005740 ORTHO05D007085 2.9e-72 276.2 239 60.7
Glyma.04G228400 Glycine max HOM05D005740 ORTHO05D007085 2.9e-72 276.2 205 67.8
VMungo1309G0132 Vigna mungo HOM05D005740 ORTHO05D007085 3.8e-72 275.8 208 67.3
AUR62035622 Chenopodium quinoa HOM05D005740 ORTHO05D007085 5.0e-72 275.4 224 62.5
Sed0000166 Sechium edule HOM05D005740 ORTHO05D007085 5.0e-72 275.4 213 65.7
QL09p007195 Quercus lobata HOM05D005740 ORTHO05D007085 6.5e-72 275.0 224 61.2
Aa31LG11G3730 Aethionema arabicum HOM05D005740 ORTHO05D007085 8.5e-72 274.6 220 64.1
ECA232G2160 Erigeron canadensis HOM05D005740 ORTHO05D007085 8.5e-72 274.6 216 64.4
Migut.F00988 Erythranthe guttata HOM05D005740 ORTHO05D007085 8.5e-72 274.6 231 63.6
FAN01G0684 Fragaria x ananassa HOM05D005740 ORTHO05D007085 8.5e-72 274.6 216 64.8
TWI23G0506 Tripterygium wilfordii HOM05D005740 ORTHO05D007085 1.4e-71 273.9 213 63.8
DCAR_020372 Daucus carota HOM05D005740 ORTHO05D007085 3.2e-71 272.7 216 63.0
Migut.F00153 Erythranthe guttata HOM05D005740 ORTHO05D007085 5.5e-71 271.9 206 65.0
RcHm_v2.0_Chr1g0382861 Rosa chinensis HOM05D005740 ORTHO05D007085 7.2e-71 271.6 216 63.4
EL10Ac3g05180 Beta vulgaris HOM05D005740 ORTHO05D007085 1.6e-70 270.4 218 63.8
Peaxi162Scf00618g00020 Petunia axillaris HOM05D005740 ORTHO05D007085 4.6e-70 268.9 219 63.5
Gohir.A08G104500 Gossypium hirsutum HOM05D005740 ORTHO05D007085 7.9e-70 268.1 218 62.8
CANSAT21G1962 Cannabis sativa HOM05D005740 ORTHO05D007085 1.4e-69 267.3 210 63.8
Ca_16779_v3 Cicer arietinum L. HOM05D005740 ORTHO05D007085 3.0e-69 266.2 212 64.2
vmacro06441 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 5.7e-68 261.9 209 63.6
Medtr3g092720 Medicago truncatula HOM05D005740 ORTHO05D007085 7.4e-68 261.5 209 62.7
unitig_748.g7278 Utricularia gibba HOM05D005740 ORTHO05D007085 7.4e-68 261.5 217 60.4
Rhsim03G0215400 Rhododendron simsii HOM05D005740 ORTHO05D007085 9.7e-68 261.2 215 61.9
vmacro22782 Vaccinium macrocarpon HOM05D005740 ORTHO05D007085 9.7e-68 261.2 211 63.0
Lj1g0025829 Lotus japonicus HOM05D005740 ORTHO05D007085 1.7e-67 260.4 210 63.8
Psat5g072000 Pisum sativum HOM05D005740 ORTHO05D007085 8.2e-67 258.1 212 61.3
Sc13g0010280 Simmondsia chinensis HOM05D005740 ORTHO05D007085 1.8e-66 256.9 228 58.3
HPP92_015050 Vanilla planifolia HOM05D005740 ORTHO05D007085 7.7e-65 251.5 224 57.1
MELO3C023190.2 Cucumis melo HOM05D005740 ORTHO05D007085 8.5e-64 248.1 190 65.3
AUR62006005 Chenopodium quinoa HOM05D005740 ORTHO05D007085 9.4e-63 244.6 204 63.2
BcaC09g52277 Brassica carinata HOM05D005740 ORTHO05D007085 3.0e-61 239.6 213 60.6
Lj3A895G46 Lonicera japonica HOM05D005740 ORTHO05D007085 8.8e-61 238.0 216 59.3
Hund09713 Selenicereus undatus HOM05D005740 ORTHO05D007085 3.3e-60 236.1 211 58.8
Os03g0856500 Oryza sativa ssp. japonica HOM05D005740 ORTHO05D007085 4.5e-57 225.7 224 52.7
TPR.G33623 Trifolium pratense HOM05D005740 ORTHO05D007085 2.2e-56 223.4 188 61.7
Zm00001eb064950 Zea mays HOM05D005740 ORTHO05D007085 1.9e-55 220.3 210 55.7
Pp3c21_1350 Physcomitrium patens HOM05D005740 ORTHO05D007085 2.1e-54 216.9 205 54.6
AagrBONN_evm.TU.Sc2ySwM_362.2025 Anthoceros agrestis HOM05D005740 ORTHO05D007085 2.7e-54 216.5 220 54.1
Pp3c18_22260 Physcomitrium patens HOM05D005740 ORTHO05D007085 6.1e-54 215.3 204 54.4
C01p22900 Brassica napus HOM05D005740 ORTHO05D007085 8.0e-54 214.9 213 56.3
CBR_g44535 Chara braunii HOM05D005740 ORTHO05D007085 8.0e-54 214.9 204 54.4
Mapoly0136s0019 Marchantia polymorpha HOM05D005740 ORTHO05D007085 8.0e-54 214.9 203 53.2
BcaC09g52279 Brassica carinata HOM05D005740 ORTHO05D007085 2.3e-53 213.4 187 61.0
A06p35310 Brassica napus HOM05D005740 ORTHO05D007085 1.5e-52 210.7 176 62.5
BraA06t26457Z Brassica rapa HOM05D005740 ORTHO05D007085 1.5e-52 210.7 176 62.5
C01p22870 Brassica napus HOM05D005740 ORTHO05D007085 4.8e-51 205.7 216 53.2
Atru.chr12.2428 Acer truncatum HOM05D005740 ORTHO05D007085 1.1e-50 204.5 187 58.8
SMO145G0182 Selaginella moellendorffii HOM05D005740 ORTHO05D007085 5.3e-50 202.2 216 48.1
Dinv29211 Davidia involucrata HOM05D005740 ORTHO05D007085 2.0e-49 200.3 155 65.2
CAN.G65.152 Capsicum annuum HOM05D005740 ORTHO05D007085 2.9e-48 196.4 187 56.7
Actinidia08698 Actinidia chinensis HOM05D005740 ORTHO05D007085 3.6e-46 189.5 148 62.8
FAN10G1912 Fragaria x ananassa HOM05D005740 ORTHO05D007085 2.0e-44 183.7 137 67.2
BcaC09g49688 Brassica carinata HOM05D005740 ORTHO05D007085 3.7e-43 179.5 200 52.5
C01p22930 Brassica napus HOM05D005740 ORTHO05D007085 3.7e-43 179.5 192 52.6
Potri.012G026375 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.1e-39 167.9 167 52.7
Potri.012G009001 Populus trichocarpa HOM05D005740 ORTHO05D007085 1.5e-31 141.0 118 59.3
Cre05.g237450 Chlamydomonas reinhardtii HOM05D005740 ORTHO05D007085 2.9e-27 126.7 218 35.3
MCO12G039 Micromonas commoda HOM05D005740 ORTHO05D007085 2.9e-27 126.7 203 38.9
Potri.011G055100 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.4e-26 123.6 186 42.5
C01p22950 Brassica napus HOM05D005740 ORTHO05D007085 8.6e-24 115.2 94 63.8
PRCOL_00006097 Prasinoderma coloniale HOM05D005740 ORTHO05D007085 3.4e-20 103.2 215 30.2
CAN.G65.153 Capsicum annuum HOM05D000273 ORTHO05D000198 8.3e-19 98.6 57 78.9
Potri.011G054700 Populus trichocarpa HOM05D005740 ORTHO05D007085 2.4e-18 97.1 82 56.1
BolC1t02230H Brassica oleracea HOM05D005740 ORTHO05D007085 2.8e-14 83.6 53 71.7
MBI08_g17822_MAGBIO Magnolia biondii HOM05D005740 ORTHO05D007085 3.4e-12 76.6 46 78.3
C01p22940 Brassica napus HOM05D005740 ORTHO05D007085 2.1e-06 57.4 47 59.6


User provided reference genes

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