Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 3.7e-140 501.5 249 100.0
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 1.2e-103 380.2 249 74.7
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 6.8e-102 374.4 260 72.3
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 1.5e-101 373.2 250 73.6
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 3.4e-101 372.1 250 73.2
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 4.4e-101 371.7 221 80.1
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 5.7e-101 371.3 227 77.5
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 2.4e-99 365.9 248 71.8
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 7.0e-99 364.4 248 71.4
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 1.2e-98 363.6 227 76.2
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 1.2e-98 363.6 229 76.4
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 1.2e-98 363.6 252 71.4
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 5.9e-98 361.3 249 69.5
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 7.8e-98 360.9 248 71.0
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 2.3e-97 359.4 249 70.3
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 5.0e-97 358.2 249 69.5
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 6.6e-97 357.8 249 69.9
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 6.6e-97 357.8 241 72.6
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 8.6e-97 357.5 227 75.8
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 1.9e-96 356.3 238 71.8
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 4.3e-96 355.1 221 77.4
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 3.6e-95 352.1 233 70.8
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 1.8e-94 349.7 224 75.4
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 1.8e-94 349.7 228 74.6
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 4.0e-94 348.6 225 74.2
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 5.2e-94 348.2 233 70.8
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 6.8e-94 347.8 249 67.9
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 8.9e-94 347.4 221 76.0
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 8.9e-94 347.4 226 72.1
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 9.8e-93 344.0 229 72.5
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 9.8e-93 344.0 229 72.5
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 1.3e-92 343.6 226 70.8
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 1.7e-92 343.2 251 68.1
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 2.2e-92 342.8 251 68.1
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 6.4e-92 341.3 228 71.1
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 6.4e-92 341.3 253 68.0
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 1.9e-91 339.7 240 69.6
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 1.9e-91 339.7 240 69.6
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 7.0e-91 337.8 240 68.8
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 1.2e-90 337.0 239 66.1
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 3.5e-90 335.5 240 65.8
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 1.0e-89 334.0 240 67.5
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 1.7e-89 333.2 233 71.7
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 1.7e-89 333.2 226 73.0
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 3.0e-89 332.4 236 71.6
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 5.0e-89 331.6 239 66.1
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 6.6e-89 331.3 239 64.9
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 8.6e-89 330.9 221 73.3
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 3.3e-88 328.9 233 66.1
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 2.8e-87 325.9 264 66.3
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 3.6e-87 325.5 224 67.9
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 6.2e-87 324.7 249 65.5
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 8.1e-87 324.3 230 67.8
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 4.0e-86 322.0 226 71.2
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 5.2e-86 321.6 240 65.4
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 6.8e-86 321.2 233 65.7
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 6.8e-86 321.2 228 68.4
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 8.9e-86 320.9 224 70.1
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 1.5e-85 320.1 240 63.8
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 3.4e-85 318.9 228 68.4
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 3.4e-85 318.9 242 64.9
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 4.4e-85 318.5 224 68.8
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 1.7e-84 316.6 240 62.5
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 2.2e-84 316.2 241 64.7
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 2.9e-84 315.8 221 68.3
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 3.7e-84 315.5 235 66.8
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 1.9e-83 313.2 301 56.1
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 1.9e-83 313.2 243 64.6
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 2.4e-83 312.8 243 64.6
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 9.2e-83 310.8 234 64.1
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 9.2e-83 310.8 226 68.1
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 2.1e-82 309.7 252 61.5
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 2.7e-82 309.3 234 62.8
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 2.7e-82 309.3 250 60.4
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 6.0e-82 308.1 219 68.5
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 7.8e-82 307.8 225 68.9
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 1.7e-81 306.6 210 72.4
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 1.1e-80 303.9 249 62.7
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 3.3e-80 302.4 248 59.3
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 2.1e-79 299.7 234 62.0
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 6.2e-79 298.1 231 64.1
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 6.8e-78 294.7 222 68.5
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 3.4e-77 292.4 209 67.9
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 7.6e-77 291.2 231 63.2
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 1.4e-75 287.0 254 57.1
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 2.4e-75 286.2 234 62.8
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 7.1e-75 284.6 228 60.1
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 1.6e-74 283.5 200 67.0
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 2.7e-74 282.7 228 60.1
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 7.3e-72 274.6 234 64.1
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 1.6e-71 273.5 188 67.0
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 1.4e-70 270.4 235 58.3
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 1.4e-70 270.4 235 58.3
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.4e-70 269.6 233 63.1
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 6.9e-70 268.1 194 64.4
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 5.8e-69 265.0 239 57.3
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 1.7e-68 263.5 227 59.0
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 3.8e-68 262.3 199 64.3
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 4.9e-68 261.9 268 55.6
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 9.6e-64 247.7 244 53.7
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 1.3e-63 247.3 288 50.3
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 1.8e-62 243.4 183 64.5
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 2.1e-58 229.9 161 66.5
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 3.5e-58 229.2 240 54.6
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 1.0e-57 227.6 175 62.9
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 3.0e-57 226.1 158 71.5
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 1.1e-54 217.6 220 55.5
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 5.8e-53 211.8 148 64.9
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 1.8e-49 200.3 161 63.4
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 6.2e-47 191.8 119 76.5
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 4.0e-46 189.1 169 57.4
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 8.4e-44 181.4 124 69.4
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 3.9e-41 172.6 123 69.9
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 3.1e-38 162.9 150 55.3
AL1G24230 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 5.9e-37 158.7 130 59.2
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 5.5e-35 152.1 217 37.3
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 1.3e-31 141.0 223 34.1
RcHm_v2.0_Chr6g0275321 Rosa chinensis HOM05D006697 ORTHO05D008161 1.2e-21 107.8 106 50.0
Lalb_Chr01g0000761 Lupinus albus HOM05D006697 ORTHO05D008161 2.0e-21 107.1 80 63.8
arahy.Tifrunner.gnm1.ann1.D8HQTE Arachis hypogaea HOM05D006697 ORTHO05D008161 1.4e-17 94.4 73 60.3
Lj7A241T18 Lonicera japonica HOM05D006697 ORTHO05D008161 5.5e-11 72.4 43 74.4
Medtr2g451120 Medicago truncatula HOM05D006697 ORTHO05D008161 5.5e-11 72.4 89 43.8
FAN20G1527 Fragaria x ananassa HOM05D006697 ORTHO05D205377 1.3e-07 61.2 74 47.3


User provided reference genes

Program Settings