Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01582 Aquilegia oxysepala HOM05D003521 ORTHO05D000476 0.0e+00 1679.5 969 100.0
TAR626G0208 Trochodendron aralioides HOM05D003521 ORTHO05D000476 0.0e+00 1107.4 973 71.0
TAR383G0706 Trochodendron aralioides HOM05D003521 ORTHO05D000476 0.0e+00 1083.9 965 69.7
Dinv30477 Davidia involucrata HOM05D003521 ORTHO05D000476 1.3e-294 1016.5 983 65.4
CSS0047293 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 1.9e-293 1012.7 984 64.8
Hma1.2p1_1195F.1_g265855 Hydrangea macrophylla HOM05D003521 ORTHO05D000476 3.3e-293 1011.9 979 65.5
Nn2g11676 Nelumbo nucifera HOM05D003521 ORTHO05D000476 4.9e-289 998.0 1020 62.5
Duzib160G0549 Durio zibethinus HOM05D003521 ORTHO05D000476 4.1e-288 995.0 983 64.7
GSVIVG01038690001 Vitis vinifera HOM05D003521 ORTHO05D000476 5.4e-288 994.6 975 66.1
Nn3g18099 Nelumbo nucifera HOM05D003521 ORTHO05D000476 1.2e-287 993.4 982 64.8
Duzib235G1126 Durio zibethinus HOM05D003521 ORTHO05D000476 1.6e-284 983.0 976 64.1
Thecc.06G092900 Theobroma cacao HOM05D003521 ORTHO05D000476 1.4e-283 979.9 982 65.5
Eucgr.F03041 Eucalyptus grandis HOM05D003521 ORTHO05D000476 1.3e-278 963.4 994 62.7
RcHm_v2.0_Chr2g0139071 Rosa chinensis HOM05D003521 ORTHO05D000476 5.6e-277 958.0 1041 60.4
QL05p021582 Quercus lobata HOM05D003521 ORTHO05D000476 1.6e-276 956.4 1005 63.0
CiPaw.02G148500 Carya illinoinensis HOM05D003521 ORTHO05D000476 1.4e-275 953.4 1020 60.9
PSO386G0042 Papaver somniferum HOM05D003521 ORTHO05D000476 5.2e-275 951.4 1000 62.2
Prupe.3G066400 Prunus persica HOM05D003521 ORTHO05D000476 1.5e-274 949.9 1003 63.0
THA.LOC104812525 Tarenaya hassleriana HOM05D003521 ORTHO05D000476 2.9e-273 945.7 982 61.4
Nitab4.5_0010600g0010 Nicotiana tabacum HOM05D003521 ORTHO05D000476 1.9e-272 943.0 1039 59.3
Lj3g0009081 Lotus japonicus HOM05D003521 ORTHO05D000476 1.2e-271 940.3 1009 60.8
CSS0015824 Camellia sinensis var. sinensis HOM05D003521 ORTHO05D000476 2.7e-271 939.1 987 61.4
Actinidia21685 Actinidia chinensis HOM05D003521 ORTHO05D000476 3.5e-271 938.7 993 61.2
Potri.003G052100 Populus trichocarpa HOM05D003521 ORTHO05D000476 3.5e-271 938.7 996 61.7
Nitab4.5_0000351g0100 Nicotiana tabacum HOM05D003521 ORTHO05D000476 7.8e-271 937.6 1031 58.9
Thhalv10018077m.g Eutrema salsugineum HOM05D003521 ORTHO05D000476 1.7e-270 936.4 985 61.8
CiPaw.01G235400 Carya illinoinensis HOM05D003521 ORTHO05D000476 6.6e-270 934.5 1001 60.8
Rhsim08G0223900 Rhododendron simsii HOM05D003521 ORTHO05D000476 1.1e-269 933.7 995 60.8
VMungo1080G0951 Vigna mungo HOM05D003521 ORTHO05D000476 1.5e-269 933.3 989 61.1
Lalb_Chr14g0373191 Lupinus albus HOM05D003521 ORTHO05D000476 3.3e-269 932.2 995 60.8
Atru.chr1.3345 Acer truncatum HOM05D003521 ORTHO05D000476 5.6e-269 931.4 983 61.9
Lalb_Chr24g0395951 Lupinus albus HOM05D003521 ORTHO05D000476 5.6e-269 931.4 986 61.1
AT1G79830 Arabidopsis thaliana HOM05D003521 ORTHO05D000476 6.2e-268 927.9 976 62.3
TWI12G1038 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 1.4e-267 926.8 975 61.7
AUR62011668 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.8e-267 926.4 993 60.7
AL2G41720 Arabidopsis lyrata HOM05D003521 ORTHO05D000476 3.1e-267 925.6 989 62.2
PSO210G6795 Papaver somniferum HOM05D003521 ORTHO05D000476 3.1e-267 925.6 1006 61.3
FAN02G3342 Fragaria x ananassa HOM05D003521 ORTHO05D000476 3.4e-266 922.2 1046 59.4
Gohir.D05G131500 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.1e-264 917.1 978 61.1
Sp5g35930 Schrenkiella parvula HOM05D003521 ORTHO05D000476 2.4e-264 916.0 982 60.9
Peaxi162Scf00207g01030 Petunia axillaris HOM05D003521 ORTHO05D000476 3.2e-264 915.6 1031 58.7
Gorai.009G135200 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.2e-263 913.7 981 61.1
Carub.0002s2767 Capsella rubella HOM05D003521 ORTHO05D000476 1.6e-263 913.3 970 62.1
Ciclev10024803m.g Citrus clementina HOM05D003521 ORTHO05D000476 1.6e-263 913.3 987 60.3
FAN14G2596 Fragaria x ananassa HOM05D003521 ORTHO05D000476 1.6e-263 913.3 1040 59.8
Dinv38015 Davidia involucrata HOM05D003521 ORTHO05D000476 3.5e-263 912.1 732 74.2
Gohir.A10G081600 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.0e-262 910.6 975 61.1
Phvul.005G169100 Phaseolus vulgaris HOM05D003521 ORTHO05D000476 3.0e-262 909.1 994 59.5
FvH4_6g31822 Fragaria vesca HOM05D003521 ORTHO05D000476 5.1e-262 908.3 1059 59.1
Lj9C509G5 Lonicera japonica HOM05D003521 ORTHO05D000476 5.1e-262 908.3 1067 57.3
Sopen06g024880 Solanum pennellii HOM05D003521 ORTHO05D000476 5.1e-262 908.3 1033 59.1
TWI18G0852 Tripterygium wilfordii HOM05D003521 ORTHO05D000476 5.1e-262 908.3 975 60.7
Migut.I00939 Erythranthe guttata HOM05D003521 ORTHO05D000476 2.5e-261 906.0 1014 59.9
MD09G1208900 Malus domestica HOM05D003521 ORTHO05D000476 3.3e-261 905.6 1008 60.2
FAN05G3380 Fragaria x ananassa HOM05D003521 ORTHO05D000476 2.1e-260 902.9 1052 58.6
CARHR143590 Cardamine hirsuta HOM05D003521 ORTHO05D000476 4.8e-260 901.7 989 60.6
Gohir.A05G132400 Gossypium hirsutum HOM05D003521 ORTHO05D000476 1.4e-259 900.2 981 60.4
Sc18g0003130 Simmondsia chinensis HOM05D003521 ORTHO05D000476 5.3e-259 898.3 988 59.8
vmacro18884 Vaccinium macrocarpon HOM05D003521 ORTHO05D000476 6.9e-259 897.9 1016 58.9
Glyma.15G016700 Glycine max HOM05D003521 ORTHO05D000476 1.7e-257 893.3 994 59.0
Gorai.011G074100 Gossypium raimondii HOM05D003521 ORTHO05D000476 1.7e-257 893.3 972 60.5
A07p26350 Brassica napus HOM05D003521 ORTHO05D000476 3.8e-257 892.1 974 59.5
Gohir.D10G069800 Gossypium hirsutum HOM05D003521 ORTHO05D000476 3.8e-257 892.1 968 60.5
C06p28740 Brassica napus HOM05D003521 ORTHO05D000476 1.9e-256 889.8 980 60.2
Cc04_g03000 Coffea canephora HOM05D003521 ORTHO05D000476 2.4e-256 889.4 1003 59.7
Hund00648 Selenicereus undatus HOM05D003521 ORTHO05D000476 2.4e-256 889.4 1027 59.3
BolC6t38043H Brassica oleracea HOM05D003521 ORTHO05D000476 3.2e-256 889.0 979 60.6
Solyc06g066610.4 Solanum lycopersicum HOM05D003521 ORTHO05D000476 4.2e-256 888.6 1036 58.2
Ca_01135_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 5.4e-256 888.3 1015 58.9
SalBow7G4780 Salvia bowleyana HOM05D003521 ORTHO05D000476 4.6e-255 885.2 1024 57.1
Manes.11G037600 Manihot esculenta HOM05D003521 ORTHO05D000476 1.0e-254 884.0 987 60.3
Medtr2g101700 Medicago truncatula HOM05D003521 ORTHO05D000476 1.3e-254 883.6 997 58.7
BraA07t30279Z Brassica rapa HOM05D003521 ORTHO05D000476 1.8e-254 883.2 992 58.9
Haze_16353 Corylus avellana HOM05D003521 ORTHO05D000476 1.1e-253 880.6 1155 53.5
Migut.D01015 Erythranthe guttata HOM05D003521 ORTHO05D000476 1.1e-253 880.6 985 59.0
SGA_v2.0_scaffold4G02009 Striga asiatica HOM05D003521 ORTHO05D000476 1.1e-253 880.6 1005 58.9
Potri.001G185050 Populus trichocarpa HOM05D003521 ORTHO05D000476 5.6e-253 878.2 1001 58.4
SGA_v2.0_scaffold68G22978 Striga asiatica HOM05D003521 ORTHO05D000476 2.1e-252 876.3 997 60.3
MELO3C023279.2 Cucumis melo HOM05D003521 ORTHO05D000476 6.2e-252 874.8 1023 58.3
MD17G1190500 Malus domestica HOM05D003521 ORTHO05D000476 8.1e-252 874.4 1002 59.3
AUR62016491 Chenopodium quinoa HOM05D003521 ORTHO05D000476 1.2e-250 870.5 993 58.4
Psat5g297520 Pisum sativum HOM05D003521 ORTHO05D000476 9.9e-250 867.5 1040 56.6
CANSAT56G3073 Cannabis sativa HOM05D003521 ORTHO05D000476 1.7e-249 866.7 1007 56.7
arahy.Tifrunner.gnm1.ann1.ZR40ID Arachis hypogaea HOM05D003521 ORTHO05D000476 2.2e-249 866.3 1002 58.1
CAN.G1152.8 Capsicum annuum HOM05D003521 ORTHO05D000476 2.2e-249 866.3 1018 57.5
Sed0014905 Sechium edule HOM05D003521 ORTHO05D000476 2.2e-249 866.3 1024 59.1
Sabra03G0027000 Salix brachista HOM05D003521 ORTHO05D000476 1.9e-248 863.2 1045 56.6
Aa31LG4G110 Aethionema arabicum HOM05D003521 ORTHO05D000476 4.6e-247 858.6 1017 57.5
ClCG02G000820 Citrullus lanatus HOM05D003521 ORTHO05D000476 2.3e-246 856.3 1023 57.5
Glyma.13G356900 Glycine max HOM05D003521 ORTHO05D000476 6.7e-246 854.7 995 57.6
PGR102G1144 Punica granatum HOM05D003521 ORTHO05D000476 8.7e-246 854.4 977 57.9
CDE02G1875 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 1.5e-245 853.6 987 57.9
HanXRQChr10g0313461 Helianthus annuus HOM05D003521 ORTHO05D000476 9.6e-245 850.9 976 58.4
COL.COLO4_30440 Corchorus olitorius HOM05D003521 ORTHO05D000476 2.4e-243 846.3 973 59.2
EL10Ac9g22035 Beta vulgaris HOM05D003521 ORTHO05D000476 1.2e-242 844.0 975 58.3
Lsat_1_v5_gn_1_35300 Lactuca sativa HOM05D003521 ORTHO05D000476 4.5e-242 842.0 998 59.2
arahy.Tifrunner.gnm1.ann1.A5WQDM Arachis hypogaea HOM05D003521 ORTHO05D000476 1.7e-241 840.1 1139 50.7
HanXRQChr04g0096181 Helianthus annuus HOM05D003521 ORTHO05D000476 8.4e-241 837.8 1001 56.8
MSTRG.22661 Avicennia marina HOM05D003521 ORTHO05D000476 1.9e-240 836.6 984 58.0
CsaV3_2G017940 Cucumis sativus L. HOM05D003521 ORTHO05D000476 3.2e-240 835.9 1022 56.8
ATR0315G089 Amborella trichopoda HOM05D003521 ORTHO05D000476 1.2e-239 833.9 974 57.7
Sed0003107 Sechium edule HOM05D003521 ORTHO05D000476 1.3e-238 830.5 1025 55.8
arahy.Tifrunner.gnm1.ann1.60NISA Arachis hypogaea HOM05D003521 ORTHO05D000476 4.8e-236 822.0 1155 49.4
unitig_62.g23765 Utricularia gibba HOM05D003521 ORTHO05D000476 1.8e-235 820.1 993 56.9
ECA247G0039 Erigeron canadensis HOM05D003521 ORTHO05D000476 5.3e-235 818.5 1023 54.3
ECA234G0658 Erigeron canadensis HOM05D003521 ORTHO05D000476 3.0e-230 802.7 995 55.3
Sabra01G0155200 Salix brachista HOM05D003521 ORTHO05D000476 1.7e-228 797.0 999 55.3
Hund06634 Selenicereus undatus HOM05D003521 ORTHO05D000476 3.1e-227 792.7 1014 54.0
Lalb_Chr04g0262811 Lupinus albus HOM05D003521 ORTHO05D000476 4.1e-227 792.3 1018 53.6
HanXRQChr12g0360801 Helianthus annuus HOM05D003521 ORTHO05D000476 1.7e-225 786.9 968 55.1
DCAR_016209 Daucus carota HOM05D003521 ORTHO05D000476 1.1e-224 784.3 970 55.4
Actinidia24741 Actinidia chinensis HOM05D003521 ORTHO05D000476 7.9e-223 778.1 973 55.8
Lsat_1_v5_gn_5_130960 Lactuca sativa HOM05D003521 ORTHO05D000476 4.1e-219 765.8 972 55.2
arahy.Tifrunner.gnm1.ann1.M6JGC2 Arachis hypogaea HOM05D003521 ORTHO05D000476 7.0e-219 765.0 1008 53.9
Zm00001eb295600 Zea mays HOM05D003521 ORTHO05D000476 4.5e-218 762.3 1049 51.5
Os05g0559900 Oryza sativa ssp. japonica HOM05D003521 ORTHO05D000476 2.6e-210 736.5 1043 50.2
Lj5C57T13 Lonicera japonica HOM05D003521 ORTHO05D000476 8.8e-206 721.5 1012 52.2
ECA232G1585 Erigeron canadensis HOM05D003521 ORTHO05D000142 8.3e-188 661.8 987 48.2
SHI10997 Sapria himalayana HOM05D003521 ORTHO05D000476 3.8e-185 652.9 1077 45.8
Cpa.g.sc1513.1 Carica papaya HOM05D003521 ORTHO05D000476 4.1e-179 632.9 481 78.0
Pp3c12_5050 Physcomitrium patens HOM05D003521 ORTHO05D000476 3.0e-177 626.7 983 47.5
Mapoly0013s0180 Marchantia polymorpha HOM05D003521 ORTHO05D000476 9.5e-176 621.7 991 46.0
CDE08G0748 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 4.7e-167 592.8 763 55.0
HanXRQChr16g0500841 Helianthus annuus HOM05D003521 ORTHO05D000476 8.9e-166 588.6 884 48.3
HPP92_003835 Vanilla planifolia HOM05D003521 ORTHO05D000476 3.5e-162 576.6 545 67.3
AagrBONN_evm.TU.Sc2ySwM_344.1927 Anthoceros agrestis HOM05D003521 ORTHO05D000476 4.6e-154 549.7 622 56.9
Pp3c4_15860 Physcomitrium patens HOM05D003521 ORTHO05D000476 1.7e-140 504.6 949 43.1
Zm00001eb343520 Zea mays HOM05D003521 ORTHO05D000476 1.6e-119 434.9 389 67.1
CBR_g16051 Chara braunii HOM05D003521 ORTHO05D000476 1.0e-108 399.1 1045 35.0
Oeu024073.1 Olea europaea HOM05D003521 ORTHO05D000476 2.9e-76 291.2 510 46.9
unitig_46.g18558 Utricularia gibba HOM05D003521 ORTHO05D000476 1.3e-71 275.8 419 45.6
CAN.G395.28 Capsicum annuum HOM05D003521 ORTHO05D000476 1.2e-58 232.6 369 47.4
Lsat_1_v5_gn_4_102620 Lactuca sativa HOM05D003521 ORTHO05D000476 4.3e-51 207.6 197 64.0
CDE08G0544 Ceratophyllum demersum HOM05D003521 ORTHO05D000476 5.6e-51 207.2 192 63.0
Cre03.g187000 Chlamydomonas reinhardtii HOM05D003521 ORTHO05D000476 3.4e-48 198.0 337 42.7
TPR.G5155 Trifolium pratense HOM05D003521 ORTHO05D000476 1.1e-46 193.0 137 78.8
Ca_01143_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.9e-46 192.2 315 47.6
PRCOL_00000677 Prasinoderma coloniale HOM05D003521 ORTHO05D000476 6.4e-39 167.2 635 30.4
SMO298G0028 Selaginella moellendorffii HOM05D003521 ORTHO05D000476 1.6e-37 162.5 363 36.6
Oeu024072.1 Olea europaea HOM05D003521 ORTHO05D000476 8.7e-36 156.8 375 38.7
Ca_25389_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 3.3e-35 154.8 243 48.1
Cpa.g.c29821 Carica papaya HOM05D003521 ORTHO05D000476 3.1e-33 148.3 90 91.1
Lsat_1_v5_gn_4_178240 Lactuca sativa HOM05D003521 ORTHO05D000476 9.0e-33 146.7 150 62.7
Dinv38016 Davidia involucrata HOM05D003521 ORTHO05D000476 5.8e-32 144.1 120 68.3
Zm00001eb343530 Zea mays HOM05D003521 ORTHO05D000476 1.3e-31 142.9 496 33.7
Cpa.g.c33209.1 Carica papaya HOM05D003521 ORTHO05D000476 6.4e-31 140.6 387 37.0
CAN.G135.35 Capsicum annuum HOM05D003521 ORTHO05D000476 7.1e-30 137.1 162 58.0
SEGI_27505 Sequoiadendron giganteum HOM05D003521 ORTHO05D000476 6.0e-29 134.0 447 32.2
MELO3C034685.2 Cucumis melo HOM05D003521 ORTHO05D000476 7.9e-29 133.7 88 79.5
HanXRQChr16g0500831 Helianthus annuus HOM05D003521 ORTHO05D000476 1.9e-27 129.0 87 80.5
Ca_31247_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 3.3e-27 128.3 91 78.0
MCO14G500 Micromonas commoda HOM05D003521 ORTHO05D000476 1.6e-26 125.9 582 28.0
AagrBONN_evm.TU.Sc2ySwM_344.1934 Anthoceros agrestis HOM05D003521 ORTHO05D000476 3.1e-25 121.7 358 31.6
Mapoly0111s0038 Marchantia polymorpha HOM05D003521 ORTHO05D000476 3.1e-25 121.7 598 27.1
TPR.G19044 Trifolium pratense HOM05D003521 ORTHO05D000476 4.0e-25 121.3 111 65.8
CBR_g37651 Chara braunii HOM05D003521 ORTHO05D000476 9.0e-25 120.2 661 26.2
Actinidia32725 Actinidia chinensis HOM05D003521 ORTHO05D000476 9.9e-24 116.7 101 68.3
arahy.Tifrunner.gnm1.ann1.J2PPD0 Arachis hypogaea HOM05D003521 ORTHO05D000476 6.4e-23 114.0 99 68.7
Lsat_1_v5_gn_4_102580 Lactuca sativa HOM05D003521 ORTHO05D000476 1.9e-22 112.5 458 34.3
arahy.Tifrunner.gnm1.ann1.SA7FDN Arachis hypogaea HOM05D003521 ORTHO05D000476 1.3e-20 106.3 63 88.9
Medtr2g043010 Medicago truncatula HOM05D003521 ORTHO05D000476 1.3e-20 106.3 161 50.3
HanXRQChr11g0325911 Helianthus annuus HOM05D003521 ORTHO05D000476 8.7e-20 103.6 84 69.0
CARHR143550 Cardamine hirsuta HOM05D003521 ORTHO05D000476 4.3e-19 101.3 254 40.2
unitig_52.g17085 Utricularia gibba HOM05D003521 ORTHO05D000476 2.4e-17 95.5 218 38.1
Ca_16259_v3 Cicer arietinum L. HOM05D001034 ORTHO05D000476 9.0e-17 93.6 73 69.9
TPR.G7293 Trifolium pratense HOM05D003521 ORTHO05D000476 2.9e-15 88.6 129 48.8
PSO596G0006 Papaver somniferum HOM05D003521 ORTHO05D000476 3.8e-15 88.2 67 71.6
PSO596G0043 Papaver somniferum HOM05D003521 ORTHO05D000476 3.8e-15 88.2 67 71.6
Lsat_1_v5_gn_2_62580 Lactuca sativa HOM05D003521 ORTHO05D000476 8.4e-15 87.0 60 81.7
Lsat_1_v5_gn_4_102600 Lactuca sativa HOM05D003521 ORTHO05D000476 1.4e-14 86.3 74 64.9
BolC1t05061H Brassica oleracea HOM05D003521 ORTHO05D000476 1.2e-13 83.2 73 65.8
Ca_25015_v3 Cicer arietinum L. HOM05D003521 ORTHO05D000476 1.0e-12 80.1 89 56.2
Thecc.08G046800 Theobroma cacao HOM05D003521 ORTHO05D000476 8.7e-12 77.0 71 64.8
CARHR212390 Cardamine hirsuta HOM05D003521 ORTHO05D000476 2.5e-11 75.5 95 54.7
AagrBONN_evm.TU.Sc2ySwM_344.1936 Anthoceros agrestis HOM05D003521 ORTHO05D000476 9.6e-11 73.6 126 43.7
MBI19_g34543_MAGBIO Magnolia biondii HOM05D003521 ORTHO05D000476 1.3e-10 73.2 47 80.9
C09p10740 Brassica napus HOM05D003521 ORTHO05D000476 4.8e-10 71.2 72 61.1
HanXRQChr01g0011031 Helianthus annuus HOM05D003521 ORTHO05D000476 4.1e-09 68.2 45 82.2
Ca_25011_v3 Cicer arietinum L. HOM05D010632 ORTHO05D000013 3.2e-06 58.5 47 66.0
EL10Ac6g13433 Beta vulgaris HOM05D000200 ORTHO05D000262 4.2e-06 58.2 52 57.7


User provided reference genes

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