Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01401 Aquilegia oxysepala HOM05D005801 ORTHO05D008555 9.9e-299 1029.6 633 100.0
TAR636G1320 Trochodendron aralioides HOM05D005801 ORTHO05D008555 1.7e-178 630.2 629 57.6
CSS0008146 Camellia sinensis var. sinensis HOM05D005801 ORTHO05D008555 1.2e-155 554.3 543 57.6
Dinv36686 Davidia involucrata HOM05D005801 ORTHO05D008555 1.2e-155 554.3 616 52.3
Cc06_g10480 Coffea canephora HOM05D005801 ORTHO05D008555 4.5e-150 535.8 352 75.3
Sopen05g014540 Solanum pennellii HOM05D005801 ORTHO05D008555 4.5e-150 535.8 341 78.0
vmacro06253 Vaccinium macrocarpon HOM05D005801 ORTHO05D008555 4.5e-150 535.8 535 56.6
Prupe.7G219800 Prunus persica HOM05D005801 ORTHO05D008555 3.8e-149 532.7 625 52.0
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 8.4e-149 531.6 351 76.6
PGSC0003DMG400038162 Solanum tuberosum HOM05D005801 ORTHO05D008555 8.4e-149 531.6 341 77.4
Peaxi162Scf00720g00044 Petunia axillaris HOM05D005801 ORTHO05D008555 1.4e-148 530.8 343 77.3
FvH4_1g06150 Fragaria vesca HOM05D005801 ORTHO05D008555 1.6e-147 527.3 337 76.3
GSVIVG01015302001 Vitis vinifera HOM05D005801 ORTHO05D008555 1.6e-147 527.3 633 50.4
arahy.Tifrunner.gnm1.ann1.BF4XTR Arachis hypogaea HOM05D005801 ORTHO05D008555 3.6e-147 526.2 346 76.3
FAN28G2516 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.6e-147 526.2 634 53.8
Gohir.A07G009500 Gossypium hirsutum HOM05D005801 ORTHO05D008555 3.6e-147 526.2 646 50.0
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 4.6e-147 525.8 634 51.3
Thecc.09G100600 Theobroma cacao HOM05D005801 ORTHO05D008555 4.6e-147 525.8 635 49.6
FAN23G0343 Fragaria x ananassa HOM05D005801 ORTHO05D008555 7.9e-147 525.0 337 76.0
RcHm_v2.0_Chr2g0091911 Rosa chinensis HOM05D005801 ORTHO05D008555 7.9e-147 525.0 337 75.4
Gohir.D07G009800 Gossypium hirsutum HOM05D005801 ORTHO05D008555 2.3e-146 523.5 645 49.0
FAN19G1715 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.0e-146 523.1 337 75.7
Rhsim03G0236600 Rhododendron simsii HOM05D005801 ORTHO05D008555 3.0e-146 523.1 523 57.4
Cfa003179 Carpinus fangiana HOM05D005801 ORTHO05D008555 3.9e-146 522.7 349 74.5
Gorai.001G010100 Gossypium raimondii HOM05D005801 ORTHO05D008555 3.9e-146 522.7 559 54.0
SalBow1G2797 Salvia bowleyana HOM05D005801 ORTHO05D008555 5.1e-146 522.3 516 57.2
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 8.7e-146 521.5 336 77.7
TWI63G0976 Tripterygium wilfordii HOM05D005801 ORTHO05D008555 8.7e-146 521.5 586 51.7
Oeu053186.1 Olea europaea HOM05D005801 ORTHO05D008555 1.5e-145 520.8 336 76.2
Nitab4.5_0000066g0110 Nicotiana tabacum HOM05D005801 ORTHO05D008555 2.5e-145 520.0 343 75.8
Potri.018G087800 Populus trichocarpa HOM05D005801 ORTHO05D008555 2.5e-145 520.0 342 75.1
QL02p041581 Quercus lobata HOM05D005801 ORTHO05D008555 7.4e-145 518.5 542 53.7
Nitab4.5_0001703g0010 Nicotiana tabacum HOM05D005801 ORTHO05D008555 1.3e-144 517.7 343 75.2
EL10Ac8g18377 Beta vulgaris HOM05D005801 ORTHO05D008555 2.2e-144 516.9 626 49.4
FAN26G1273 Fragaria x ananassa HOM05D005801 ORTHO05D008555 2.2e-144 516.9 337 74.5
CANSAT21G1751 Cannabis sativa HOM05D005801 ORTHO05D008555 3.7e-144 516.2 341 75.4
DCAR_028663 Daucus carota HOM05D005801 ORTHO05D008555 3.7e-144 516.2 511 66.5
CAN.G370.29 Capsicum annuum HOM05D005801 ORTHO05D008555 1.1e-143 514.6 343 75.8
FAN19G0317 Fragaria x ananassa HOM05D005801 ORTHO05D008555 1.4e-143 514.2 337 73.9
Manes.16G108700 Manihot esculenta HOM05D005801 ORTHO05D008555 1.4e-143 514.2 348 73.9
CiPaw.04G157900 Carya illinoinensis HOM05D005801 ORTHO05D008555 1.8e-143 513.8 348 74.1
Lalb_Chr05g0223241 Lupinus albus HOM05D005801 ORTHO05D008555 3.1e-143 513.1 339 75.2
Lj4P387T11 Lonicera japonica HOM05D005801 ORTHO05D008555 1.5e-142 510.8 487 58.3
MD02G1065700 Malus domestica HOM05D005801 ORTHO05D008555 4.5e-142 509.2 344 73.0
Solyc05g017990.4 Solanum lycopersicum HOM05D005801 ORTHO05D008555 7.7e-142 508.4 330 76.4
VMungo0251G1949 Vigna mungo HOM05D005801 ORTHO05D008555 1.3e-141 507.7 336 75.6
Eucgr.C00997 Eucalyptus grandis HOM05D005801 ORTHO05D008555 1.7e-141 507.3 344 73.5
FAN26G1315 Fragaria x ananassa HOM05D005801 ORTHO05D008555 3.8e-141 506.1 337 73.3
Sabra18G0076100 Salix brachista HOM05D005801 ORTHO05D008555 1.1e-140 504.6 342 73.1
Phvul.002G308600 Phaseolus vulgaris HOM05D005801 ORTHO05D008555 1.9e-140 503.8 338 74.9
MSTRG.10602 Avicennia marina HOM05D005801 ORTHO05D008555 2.5e-140 503.4 521 55.5
CsaV3_1G039790 Cucumis sativus L. HOM05D005801 ORTHO05D008555 4.2e-140 502.7 537 54.6
Lj4g0016627 Lotus japonicus HOM05D005801 ORTHO05D008555 5.5e-140 502.3 339 74.3
Migut.K00541 Erythranthe guttata HOM05D005801 ORTHO05D008555 4.6e-139 499.2 342 74.0
Sc18g0001500 Simmondsia chinensis HOM05D005801 ORTHO05D008555 2.3e-138 496.9 611 48.4
PSO063G7511 Papaver somniferum HOM05D005801 ORTHO05D008555 6.7e-138 495.4 309 80.3
MELO3C015412.2 Cucumis melo HOM05D005801 ORTHO05D008555 2.6e-137 493.4 537 53.4
Ciclev10007826m.g Citrus clementina HOM05D005801 ORTHO05D008555 3.3e-137 493.0 345 71.6
Psat7g016720 Pisum sativum HOM05D005801 ORTHO05D008555 4.3e-137 492.7 340 72.4
Ca_17365_v3 Cicer arietinum L. HOM05D005801 ORTHO05D008555 9.7e-137 491.5 347 71.5
MBI04_g34406_MAGBIO Magnolia biondii HOM05D005801 ORTHO05D008555 9.7e-137 491.5 338 73.7
Glyma.08G033500 Glycine max HOM05D005801 ORTHO05D008555 1.7e-136 490.7 337 73.3
PSO832G4312 Papaver somniferum HOM05D005801 ORTHO05D008555 2.2e-136 490.3 303 80.5
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 4.1e-135 486.1 341 71.6
Medtr8g102480 Medicago truncatula HOM05D005801 ORTHO05D008555 1.7e-133 480.7 344 72.4
Sed0027809 Sechium edule HOM05D005801 ORTHO05D008555 5.5e-132 475.7 340 71.2
AL3G48350 Arabidopsis lyrata HOM05D005801 ORTHO05D008555 1.6e-131 474.2 338 69.2
ECA234G2262 Erigeron canadensis HOM05D005801 ORTHO05D008555 2.1e-131 473.8 531 62.7
Sp3g33210 Schrenkiella parvula HOM05D005801 ORTHO05D008555 2.7e-131 473.4 342 68.7
unitig_46.g18397 Utricularia gibba HOM05D005801 ORTHO05D008555 3.6e-131 473.0 339 70.8
ATR0681G166 Amborella trichopoda HOM05D005801 ORTHO05D008555 2.3e-130 470.3 355 66.2
Carub.0003s3414 Capsella rubella HOM05D005801 ORTHO05D008555 3.9e-130 469.5 338 68.6
CARHR110310 Cardamine hirsuta HOM05D005801 ORTHO05D008555 3.9e-130 469.5 341 67.7
Thhalv10002296m.g Eutrema salsugineum HOM05D005801 ORTHO05D008555 3.9e-130 469.5 337 68.5
AT2G19870 Arabidopsis thaliana HOM05D005801 ORTHO05D008555 5.2e-130 469.2 338 68.3
CDE04G1187 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 2.2e-128 463.8 335 71.6
Lsat_1_v5_gn_5_144900 Lactuca sativa HOM05D005801 ORTHO05D008555 9.1e-127 458.4 547 58.7
BcaC06g36648 Brassica carinata HOM05D005801 ORTHO05D008555 5.9e-126 455.7 341 68.0
BolC7t40588H Brassica oleracea HOM05D005801 ORTHO05D008555 5.9e-126 455.7 341 68.0
BcaB03g16775 Brassica carinata HOM05D005801 ORTHO05D008555 1.3e-125 454.5 340 67.1
SGA_v2.0_scaffold129G34141 Striga asiatica HOM05D005801 ORTHO05D008555 2.9e-125 453.4 339 67.3
BraA07t27882Z Brassica rapa HOM05D005801 ORTHO05D008555 6.5e-125 452.2 341 67.2
A07p00840 Brassica napus HOM05D005801 ORTHO05D008555 1.5e-124 451.1 344 66.6
C07p01810 Brassica napus HOM05D005801 ORTHO05D008555 1.5e-124 451.1 341 67.4
Zm00001eb371210 Zea mays HOM05D005801 ORTHO05D008555 1.6e-123 447.6 336 66.1
Actinidia32650 Actinidia chinensis HOM05D005801 ORTHO05D008555 2.7e-123 446.8 332 69.6
HPP92_009088 Vanilla planifolia HOM05D005801 ORTHO05D008555 2.0e-121 440.7 334 64.7
AUR62021403 Chenopodium quinoa HOM05D005801 ORTHO05D008555 8.2e-120 435.3 341 66.0
Aa31LG8G16820 Aethionema arabicum HOM05D005801 ORTHO05D008555 2.0e-118 430.6 351 61.3
AUR62010892 Chenopodium quinoa HOM05D005801 ORTHO05D008555 1.1e-116 424.9 349 63.9
Cpa.g.sc40.94 Carica papaya HOM05D005801 ORTHO05D008555 1.2e-115 421.4 283 75.3
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 1.0e-114 418.3 290 75.5
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 1.0e-114 418.3 290 75.5
SHI02689 Sapria himalayana HOM05D005801 ORTHO05D008555 4.0e-114 416.4 345 63.2
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 3.4e-113 413.3 290 74.8
MD15G1196600 Malus domestica HOM05D005801 ORTHO05D008555 5.2e-106 389.4 259 76.1
Mapoly0135s0034 Marchantia polymorpha HOM05D005801 ORTHO05D008555 2.6e-81 307.4 342 50.3
Pp3c17_17180 Physcomitrium patens HOM05D005801 ORTHO05D008555 3.3e-76 290.4 307 50.8
CBR_g20364 Chara braunii HOM05D005801 ORTHO05D008555 7.6e-73 279.3 291 50.2
FvH4_1g06190 Fragaria vesca HOM05D005801 ORTHO05D008555 3.8e-72 276.9 175 78.9
Lalb_Chr09g0331541 Lupinus albus HOM05D005801 ORTHO05D008555 2.4e-66 257.7 214 65.0
SMO367G0373 Selaginella moellendorffii HOM05D005801 ORTHO05D008555 4.0e-66 256.9 277 51.3
Lj6C67T4 Lonicera japonica HOM05D005801 ORTHO05D008555 1.6e-59 235.0 188 66.0
CAN.G640.23 Capsicum annuum HOM05D005801 ORTHO05D008555 3.3e-52 210.7 209 56.9
Os01g0742000 Oryza sativa ssp. japonica HOM05D005801 ORTHO05D008555 4.3e-52 210.3 165 71.5
MCO03G539 Micromonas commoda HOM05D005801 ORTHO05D008555 1.5e-49 201.8 333 40.5
CDE02G3237 Ceratophyllum demersum HOM05D005801 ORTHO05D008555 7.6e-49 199.5 546 31.3
Cre13.g566150 Chlamydomonas reinhardtii HOM05D005801 ORTHO05D008555 8.4e-48 196.1 357 36.1
CAN.G775.15 Capsicum annuum HOM05D005801 ORTHO05D008555 2.4e-47 194.5 287 42.2
PRCOL_00003145 Prasinoderma coloniale HOM05D005801 ORTHO05D008555 1.3e-45 188.7 285 40.0
CAN.G1277.2 Capsicum annuum HOM05D005801 ORTHO05D008555 5.7e-36 156.8 285 41.4
HanXRQChr12g0378121 Helianthus annuus HOM05D005801 ORTHO05D008555 2.1e-35 154.8 129 56.6
Lalb_Chr09g0331551 Lupinus albus HOM05D005801 ORTHO05D008555 1.7e-24 118.6 84 66.7
EL10Ac8g19871 Beta vulgaris HOM05D005801 ORTHO05D008555 9.4e-23 112.8 78 74.4
CAN.G77.3 Capsicum annuum HOM05D005801 ORTHO05D008555 9.1e-18 96.3 83 56.6
BcaC04g20246 Brassica carinata HOM05D005801 ORTHO05D016715 6.5e-16 90.1 83 48.2
BolC9t57462H Brassica oleracea HOM05D005801 ORTHO05D016715 6.5e-16 90.1 83 48.2
C09p45950 Brassica napus HOM05D005801 ORTHO05D016715 1.1e-15 89.4 83 47.0
A07p26140 Brassica napus HOM05D005801 ORTHO05D013666 1.4e-13 82.4 68 52.9
BraA07t30260Z Brassica rapa HOM05D005801 ORTHO05D013666 6.7e-13 80.1 68 51.5
BcaC03g16316 Brassica carinata HOM05D005801 ORTHO05D016715 8.8e-13 79.7 71 49.3
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 3.3e-12 77.8 239 27.6
C03p54440 Brassica napus HOM05D005801 ORTHO05D041341 5.7e-12 77.0 56 60.7
BolC3t17730H Brassica oleracea HOM05D005801 ORTHO05D041341 5.7e-12 77.0 56 60.7
BcaB08g34890 Brassica carinata HOM05D005801 ORTHO05D008555 1.8e-10 72.0 79 54.4
BcaC04g22492 Brassica carinata HOM05D005801 ORTHO05D016715 1.6e-09 68.9 64 48.4
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 9.4e-07 59.7 184 32.6
BcaB07g33268 Brassica carinata HOM05D005801 ORTHO05D016715 8.0e-06 56.6 54 51.9
BcaB07g33439 Brassica carinata HOM05D005801 ORTHO05D016715 8.0e-06 56.6 54 51.9
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 8.0e-06 56.6 180 31.1


User provided reference genes

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