Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G01101 Aquilegia oxysepala HOM05D005173 ORTHO05D006214 6.4e-182 640.6 315 100.0
TAR636G1303 Trochodendron aralioides HOM05D005173 ORTHO05D006214 2.6e-159 565.5 303 88.8
Atru.chr7.1658 Acer truncatum HOM05D005173 ORTHO05D006214 5.5e-157 557.8 310 85.8
PGR142G0948 Punica granatum HOM05D005173 ORTHO05D006214 1.8e-155 552.7 303 86.5
Thecc.09G081500 Theobroma cacao HOM05D005173 ORTHO05D006214 1.8e-155 552.7 303 86.5
GSVIVG01015121001 Vitis vinifera HOM05D005173 ORTHO05D006214 3.9e-155 551.6 304 86.5
Cpa.g.sc28.94 Carica papaya HOM05D005173 ORTHO05D006214 3.3e-154 548.5 303 83.8
Solyc07g041200.3 Solanum lycopersicum HOM05D005173 ORTHO05D006214 7.4e-154 547.4 303 85.1
Nn8g38732 Nelumbo nucifera HOM05D005173 ORTHO05D006214 1.3e-153 546.6 303 86.1
Gorai.013G226300 Gossypium raimondii HOM05D005173 ORTHO05D006214 1.6e-153 546.2 300 86.0
Phvul.003G133200 Phaseolus vulgaris HOM05D005173 ORTHO05D006214 2.2e-153 545.8 303 84.5
Sopen07g020470 Solanum pennellii HOM05D005173 ORTHO05D006214 2.2e-153 545.8 303 84.8
arahy.Tifrunner.gnm1.ann1.6AS4TW Arachis hypogaea HOM05D005173 ORTHO05D006214 2.8e-153 545.4 304 85.9
Hma1.2p1_0797F.1_g219350 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 2.8e-153 545.4 302 86.8
Potri.006G145200 Populus trichocarpa HOM05D005173 ORTHO05D006214 2.8e-153 545.4 303 84.5
CiPaw.03G210500 Carya illinoinensis HOM05D005173 ORTHO05D006214 4.8e-153 544.7 303 84.5
Prupe.7G203600 Prunus persica HOM05D005173 ORTHO05D006214 4.8e-153 544.7 303 84.5
PGSC0003DMG400020952 Solanum tuberosum HOM05D005173 ORTHO05D006214 4.8e-153 544.7 303 84.5
VMungo1215G2902 Vigna mungo HOM05D005173 ORTHO05D006214 6.3e-153 544.3 310 82.6
Dinv42364 Davidia involucrata HOM05D005173 ORTHO05D006214 1.1e-152 543.5 303 86.1
TAR624G0255 Trochodendron aralioides HOM05D005173 ORTHO05D006214 3.1e-152 542.0 303 84.8
arahy.Tifrunner.gnm1.ann1.9Y0BJI Arachis hypogaea HOM05D005173 ORTHO05D006214 4.1e-152 541.6 304 85.2
PSO063G3756 Papaver somniferum HOM05D005173 ORTHO05D006214 4.1e-152 541.6 303 85.5
PSO421G0551 Papaver somniferum HOM05D005173 ORTHO05D006214 4.1e-152 541.6 302 86.1
Lalb_Chr07g0181031 Lupinus albus HOM05D005173 ORTHO05D006214 5.3e-152 541.2 303 83.5
Sc18g0002360 Simmondsia chinensis HOM05D005173 ORTHO05D006214 5.3e-152 541.2 303 84.2
Dinv25585 Davidia involucrata HOM05D005173 ORTHO05D006214 6.9e-152 540.8 302 85.4
Duzib150G1290 Durio zibethinus HOM05D005173 ORTHO05D006214 6.9e-152 540.8 303 84.5
MELO3C015504.2 Cucumis melo HOM05D005173 ORTHO05D006214 1.2e-151 540.0 303 83.2
ClCG03G015280 Citrullus lanatus HOM05D005173 ORTHO05D006214 1.5e-151 539.7 303 83.2
Glyma.13G107800 Glycine max HOM05D005173 ORTHO05D006214 1.5e-151 539.7 303 84.2
Potri.018G064800 Populus trichocarpa HOM05D005173 ORTHO05D006214 1.5e-151 539.7 303 84.2
CSS0048515 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 2.0e-151 539.3 303 84.2
CsaV3_1G040770 Cucumis sativus L. HOM05D005173 ORTHO05D006214 2.0e-151 539.3 303 83.2
Glyma.17G051500 Glycine max HOM05D005173 ORTHO05D006214 2.0e-151 539.3 303 83.8
Actinidia39689 Actinidia chinensis HOM05D005173 ORTHO05D006214 2.6e-151 538.9 313 82.4
Ciclev10008959m.g Citrus clementina HOM05D005173 ORTHO05D006214 2.6e-151 538.9 303 84.5
Manes.03G037700 Manihot esculenta HOM05D005173 ORTHO05D006214 3.4e-151 538.5 303 83.5
Lj4g0027115 Lotus japonicus HOM05D005173 ORTHO05D006214 4.5e-151 538.1 303 83.5
QL02p061251 Quercus lobata HOM05D005173 ORTHO05D006214 4.5e-151 538.1 303 83.5
MD15G1213300 Malus domestica HOM05D005173 ORTHO05D006214 1.0e-150 537.0 303 83.2
Ca_21308_v3 Cicer arietinum L. HOM05D005173 ORTHO05D006214 1.7e-150 536.2 303 83.5
Cc00_g19370 Coffea canephora HOM05D005173 ORTHO05D006214 1.7e-150 536.2 302 85.8
Eucgr.C00843 Eucalyptus grandis HOM05D005173 ORTHO05D006214 1.7e-150 536.2 303 82.5
Lalb_Chr12g0200011 Lupinus albus HOM05D005173 ORTHO05D006214 5.0e-150 534.6 302 82.1
Migut.L01541 Erythranthe guttata HOM05D005173 ORTHO05D006214 8.5e-150 533.9 309 82.2
MSTRG.26457 Avicennia marina HOM05D005173 ORTHO05D006214 1.1e-149 533.5 303 82.8
Gohir.A13G192200 Gossypium hirsutum HOM05D005173 ORTHO05D006214 1.1e-149 533.5 300 83.7
Sed0012764 Sechium edule HOM05D005173 ORTHO05D006214 1.4e-149 533.1 303 82.2
MD02G1086100 Malus domestica HOM05D005173 ORTHO05D006214 1.9e-149 532.7 303 82.5
CAN.G88.5 Capsicum annuum HOM05D005173 ORTHO05D006214 2.5e-149 532.3 303 83.2
RcHm_v2.0_Chr2g0094221 Rosa chinensis HOM05D005173 ORTHO05D006214 2.5e-149 532.3 303 81.8
Manes.16G098000 Manihot esculenta HOM05D005173 ORTHO05D006214 3.2e-149 531.9 305 83.3
TWI32G0591 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 3.2e-149 531.9 312 79.5
COL.COLO4_18139 Corchorus olitorius HOM05D005173 ORTHO05D006214 2.1e-148 529.3 339 76.1
Medtr4g125660 Medicago truncatula HOM05D005173 ORTHO05D006214 2.7e-148 528.9 305 82.3
FvH4_1g08150 Fragaria vesca HOM05D005173 ORTHO05D006214 3.6e-148 528.5 303 81.2
BcaB08g36505 Brassica carinata HOM05D005173 ORTHO05D006214 6.1e-148 527.7 303 81.8
Lsat_1_v5_gn_5_142000 Lactuca sativa HOM05D005173 ORTHO05D006214 6.1e-148 527.7 311 80.1
CANSAT56G2861 Cannabis sativa HOM05D005173 ORTHO05D006214 7.9e-148 527.3 309 80.3
MSTRG.19482 Avicennia marina HOM05D005173 ORTHO05D006214 1.0e-147 526.9 312 81.1
FAN19G2713 Fragaria x ananassa HOM05D005173 ORTHO05D006214 1.0e-147 526.9 303 80.9
TWI63G0548 Tripterygium wilfordii HOM05D005173 ORTHO05D006214 1.0e-147 526.9 303 81.8
FAN23G0270 Fragaria x ananassa HOM05D005173 ORTHO05D006214 1.4e-147 526.6 303 80.9
Psat4g016960 Pisum sativum HOM05D005173 ORTHO05D006214 1.4e-147 526.6 303 82.8
EL10Ac8g19142 Beta vulgaris HOM05D005173 ORTHO05D006214 1.8e-147 526.2 301 82.1
Gohir.D13G197600 Gossypium hirsutum HOM05D005173 ORTHO05D006214 3.9e-147 525.0 300 84.0
DCAR_024724 Daucus carota HOM05D005173 ORTHO05D006214 5.1e-147 524.6 303 80.9
A10p19490 Brassica napus HOM05D005173 ORTHO05D006214 1.1e-146 523.5 303 81.2
BraA10t44025Z Brassica rapa HOM05D005173 ORTHO05D006214 1.1e-146 523.5 303 81.2
Sed0013811 Sechium edule HOM05D005173 ORTHO05D006214 1.1e-146 523.5 303 80.5
THA.LOC104799624 Tarenaya hassleriana HOM05D005173 ORTHO05D006214 1.1e-146 523.5 303 82.2
HanXRQChr01g0007561 Helianthus annuus HOM05D005173 ORTHO05D006214 1.5e-146 523.1 301 81.7
Haze_25966 Corylus avellana HOM05D005173 ORTHO05D006214 2.0e-146 522.7 366 71.0
FAN28G2824 Fragaria x ananassa HOM05D005173 ORTHO05D006214 2.6e-146 522.3 303 80.2
HanXRQChr09g0237971 Helianthus annuus HOM05D005173 ORTHO05D006214 2.6e-146 522.3 301 82.1
FAN26G1854 Fragaria x ananassa HOM05D005173 ORTHO05D006214 3.3e-146 521.9 303 79.9
FAN26G2726 Fragaria x ananassa HOM05D005173 ORTHO05D006214 4.4e-146 521.5 310 78.4
Thhalv10014184m.g Eutrema salsugineum HOM05D005173 ORTHO05D006214 5.7e-146 521.2 303 80.5
A02p06290 Brassica napus HOM05D005173 ORTHO05D006214 2.8e-145 518.8 302 80.5
BraA02t05577Z Brassica rapa HOM05D005173 ORTHO05D006214 2.8e-145 518.8 302 80.5
Carub.0006s1885 Capsella rubella HOM05D005173 ORTHO05D006214 3.7e-145 518.5 301 81.1
Sp6g23940 Schrenkiella parvula HOM05D005173 ORTHO05D006214 3.7e-145 518.5 302 80.5
BcaC04g19437 Brassica carinata HOM05D005173 ORTHO05D006214 4.8e-145 518.1 303 80.2
C09p55690 Brassica napus HOM05D005173 ORTHO05D006214 4.8e-145 518.1 303 80.2
ECA234G3859 Erigeron canadensis HOM05D005173 ORTHO05D006214 8.2e-145 517.3 302 80.5
BolC2t07046H Brassica oleracea HOM05D005173 ORTHO05D006214 2.4e-144 515.8 302 80.1
BcaB05g22843 Brassica carinata HOM05D005173 ORTHO05D006214 3.1e-144 515.4 303 80.9
AL6G32050 Arabidopsis lyrata HOM05D005173 ORTHO05D006214 4.1e-144 515.0 303 80.2
BolC9t58435H Brassica oleracea HOM05D005173 ORTHO05D006214 5.3e-144 514.6 303 79.9
AT5G20520 Arabidopsis thaliana HOM05D005173 ORTHO05D006214 1.2e-143 513.5 303 79.5
CARHR192290 Cardamine hirsuta HOM05D005173 ORTHO05D006214 2.0e-143 512.7 303 80.5
Oeu054818.3 Olea europaea HOM05D005173 ORTHO05D006214 2.6e-143 512.3 347 73.2
Nitab4.5_0001488g0160 Nicotiana tabacum HOM05D005173 ORTHO05D006214 2.9e-142 508.8 303 80.9
Lj7C682G9 Lonicera japonica HOM05D005173 ORTHO05D006214 3.8e-142 508.4 303 81.5
Sabra18G0057400 Salix brachista HOM05D005173 ORTHO05D006214 8.5e-142 507.3 371 68.7
CDE04G2820 Ceratophyllum demersum HOM05D005173 ORTHO05D006214 7.2e-141 504.2 303 77.2
MSTRG.10526 Avicennia marina HOM05D005173 ORTHO05D006214 1.6e-140 503.1 303 78.9
Duzib168G0179 Durio zibethinus HOM05D005173 ORTHO05D006214 4.7e-140 501.5 303 78.5
Nitab4.5_0013150g0020 Nicotiana tabacum HOM05D005173 ORTHO05D006214 6.1e-140 501.1 303 79.9
SGA_v2.0_scaffold21G09462 Striga asiatica HOM05D005173 ORTHO05D006214 1.4e-139 500.0 368 69.0
Lsat_1_v5_gn_7_34821 Lactuca sativa HOM05D005173 ORTHO05D006214 1.1e-138 496.9 302 78.8
Sabra06G0114800 Salix brachista HOM05D005173 ORTHO05D006214 2.6e-138 495.7 321 74.5
AUR62029004 Chenopodium quinoa HOM05D005173 ORTHO05D006214 2.8e-137 492.3 301 79.1
Ah.14g085040 Amaranthus hybridus HOM05D005173 ORTHO05D006214 4.8e-137 491.5 298 77.9
Peaxi162Scf00246g00045 Petunia axillaris HOM05D005173 ORTHO05D006214 1.8e-136 489.6 287 81.5
vmacro17173 Vaccinium macrocarpon HOM05D005173 ORTHO05D006214 2.4e-136 489.2 412 61.9
AUR62025172 Chenopodium quinoa HOM05D005173 ORTHO05D006214 5.3e-136 488.0 300 78.7
Os07g0608300 Oryza sativa ssp. japonica HOM05D005173 ORTHO05D006214 5.9e-135 484.6 300 74.7
Zm00001eb108940 Zea mays HOM05D005173 ORTHO05D006214 2.2e-134 482.6 299 74.2
DCAR_028284 Daucus carota HOM05D005173 ORTHO05D006214 6.5e-134 481.1 316 73.4
SalBow1G6961 Salvia bowleyana HOM05D005173 ORTHO05D006214 2.5e-133 479.2 343 70.8
HPP92_006149 Vanilla planifolia HOM05D005173 ORTHO05D006214 3.3e-130 468.8 299 72.6
unitig_22.g5750 Utricularia gibba HOM05D005173 ORTHO05D006214 9.7e-130 467.2 304 73.4
Aa31LG1G14140 Aethionema arabicum HOM05D005173 ORTHO05D006214 1.4e-128 463.4 303 74.3
SHI33752 Sapria himalayana HOM05D005173 ORTHO05D006214 2.2e-126 456.1 283 76.7
Rhsim05G0012900 Rhododendron simsii HOM05D005173 ORTHO05D006214 1.2e-124 450.3 341 66.0
Mapoly0002s0260 Marchantia polymorpha HOM05D005173 ORTHO05D006214 5.7e-122 441.4 297 71.4
SMO203G0271 Selaginella moellendorffii HOM05D005173 ORTHO05D006214 7.5e-122 441.0 299 70.2
DCAR_031940 Daucus carota HOM05D005173 ORTHO05D006214 6.8e-115 417.9 303 66.7
BcaC03g13770 Brassica carinata HOM05D005173 ORTHO05D006214 1.0e-107 394.0 283 69.6
Pp3c15_14310 Physcomitrium patens HOM05D005173 ORTHO05D006214 2.0e-106 389.8 303 61.7
BcaB05g22835 Brassica carinata HOM05D005173 ORTHO05D006214 9.8e-106 387.5 224 80.4
ATR0598G148 Amborella trichopoda HOM05D005173 ORTHO05D006214 1.7e-105 386.7 230 80.0
Actinidia25222 Actinidia chinensis HOM05D005173 ORTHO05D006214 1.1e-96 357.5 217 80.6
QL02p061362 Quercus lobata HOM05D005173 ORTHO05D006214 4.3e-93 345.5 191 83.2
CBR_g3819 Chara braunii HOM05D005173 ORTHO05D006214 7.3e-93 344.7 297 57.6
TPR.G9429 Trifolium pratense HOM05D005173 ORTHO05D006214 3.8e-81 305.8 176 83.5
HPP92_009230 Vanilla planifolia HOM05D005173 ORTHO05D006214 3.6e-76 289.3 175 80.6
Rhsim03G0230600 Rhododendron simsii HOM05D005173 ORTHO05D006214 4.7e-76 288.9 211 68.2
TPR.G23232 Trifolium pratense HOM05D005173 ORTHO05D006214 7.1e-56 221.9 135 74.1
Cre03.g160100 Chlamydomonas reinhardtii HOM05D005173 ORTHO05D006214 2.1e-55 220.3 302 39.4
HPP92_009231 Vanilla planifolia HOM05D005173 ORTHO05D006214 1.1e-53 214.5 128 73.4
BNapus_Darmor_BZH_scaffold_38p01550 Brassica napus HOM05D005173 ORTHO05D006214 6.9e-51 205.3 130 77.7
Cfa026742 Carpinus fangiana HOM05D005173 ORTHO05D006214 2.5e-37 160.2 307 35.2
SGA_v2.0_scaffold23G10070 Striga asiatica HOM05D005173 ORTHO05D006214 6.7e-30 135.6 118 61.0
PRCOL_00002900 Prasinoderma coloniale HOM05D005173 ORTHO05D006214 4.4e-29 132.9 304 30.6
ClCG07G005020 Citrullus lanatus HOM05D005173 ORTHO05D006214 3.7e-20 103.2 77 66.2
Hma1.2p1_0440F.1_g153610 Hydrangea macrophylla HOM05D005173 ORTHO05D006214 1.8e-19 100.9 78 62.8
CSS0040146 Camellia sinensis var. sinensis HOM05D005173 ORTHO05D006214 8.5e-17 92.0 54 70.4
Lsat_1_v5_gn_2_31840 Lactuca sativa HOM05D005173 ORTHO05D006214 3.6e-15 86.7 57 71.9
MCO15G111 Micromonas commoda HOM05D005173 ORTHO05D006214 8.8e-14 82.0 327 25.7
Lsat_1_v5_gn_5_98841 Lactuca sativa HOM05D005173 ORTHO05D006214 1.2e-13 81.6 80 55.0
Haze_27227 Corylus avellana HOM05D000464 ORTHO05D000408 5.3e-11 72.8 171 26.3
Nn2g12540 Nelumbo nucifera HOM05D005173 ORTHO05D006214 5.3e-11 72.8 57 50.9
THA.LOC104823854 Tarenaya hassleriana HOM05D000464 ORTHO05D000408 5.3e-11 72.8 262 25.6
Glyma.19G050600 Glycine max HOM05D000464 ORTHO05D000408 2.7e-10 70.5 249 25.3
SpUn0238_0020 Schrenkiella parvula HOM05D000464 ORTHO05D000408 4.5e-10 69.7 208 25.0
ATR0691G084 Amborella trichopoda HOM05D000464 ORTHO05D000408 7.7e-10 68.9 258 22.9
Lalb_Chr02g0158151 Lupinus albus HOM05D000464 ORTHO05D000408 1.0e-09 68.6 210 26.2
Phvul.004G067200 Phaseolus vulgaris HOM05D000464 ORTHO05D000408 1.0e-09 68.6 210 25.2
Thhalv10009744m.g Eutrema salsugineum HOM05D000464 ORTHO05D000408 1.7e-09 67.8 222 24.3
Sc11g0008440 Simmondsia chinensis HOM05D000464 ORTHO05D000408 1.7e-09 67.8 210 24.8
Glyma.13G044600 Glycine max HOM05D000464 ORTHO05D000408 2.2e-09 67.4 289 24.9
Carub.0001s1333 Capsella rubella HOM05D000464 ORTHO05D000408 1.1e-08 65.1 204 26.0
Hma1.2p1_0536F.1_g174110 Hydrangea macrophylla HOM05D005096 ORTHO05D006214 1.5e-08 64.7 40 77.5
Hund13036 Selenicereus undatus HOM05D000464 ORTHO05D000408 1.5e-08 64.7 208 23.6
BcaB02g06457 Brassica carinata HOM05D000464 ORTHO05D000408 2.5e-08 63.9 216 24.1
BcaC05g25265 Brassica carinata HOM05D000464 ORTHO05D000408 2.5e-08 63.9 208 24.5
unitig_88.g27802 Utricularia gibba HOM05D000464 ORTHO05D000408 2.5e-08 63.9 210 24.3
BolC5t29894H Brassica oleracea HOM05D000464 ORTHO05D000408 3.2e-08 63.5 208 24.5
AT1G13610 Arabidopsis thaliana HOM05D000464 ORTHO05D000408 4.2e-08 63.2 169 28.4
A06p09700 Brassica napus HOM05D000464 ORTHO05D000408 4.2e-08 63.2 208 24.5
C05p11410 Brassica napus HOM05D000464 ORTHO05D000408 4.2e-08 63.2 208 24.5
BraA06t24160Z Brassica rapa HOM05D000464 ORTHO05D000408 4.2e-08 63.2 208 24.5
Cre03.g207041 Chlamydomonas reinhardtii HOM05D000464 ORTHO05D000408 4.2e-08 63.2 169 24.9
AL1G25394 Arabidopsis lyrata HOM05D000464 ORTHO05D000408 9.4e-08 62.0 169 27.8
SEGI_17932 Sequoiadendron giganteum HOM05D005173 ORTHO05D006214 2.1e-07 60.8 38 78.9
EL10Ac8g18845 Beta vulgaris HOM05D000464 ORTHO05D000408 3.6e-07 60.1 208 22.6
PSO210G0990 Papaver somniferum HOM05D003117 ORTHO05D003612 8.0e-07 58.9 153 31.4
VMungo0464G1112 Vigna mungo HOM05D000464 ORTHO05D000408 3.0e-06 57.0 193 23.8
Pp3c12_23220 Physcomitrium patens HOM05D002163 ORTHO05D002386 4.0e-06 56.6 196 28.6
Carub.0007s2802 Capsella rubella HOM05D002163 ORTHO05D002386 6.8e-06 55.8 244 23.0


User provided reference genes

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