Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 3.6e-155 551.6 291 100.0
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 4.0e-130 468.4 257 93.8
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 2.2e-83 313.2 234 68.4
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.1e-82 309.3 237 66.7
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 2.9e-80 302.8 256 62.5
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 2.5e-79 299.7 234 67.5
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 3.6e-78 295.8 280 58.9
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 1.8e-77 293.5 215 70.2
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 8.8e-77 291.2 230 65.2
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 1.7e-75 287.0 231 62.3
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 2.2e-75 286.6 253 60.5
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 2.2e-75 286.6 227 65.6
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 2.8e-75 286.2 246 63.4
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.8e-75 286.2 241 62.7
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 1.4e-74 283.9 253 60.5
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 3.1e-74 282.7 234 62.0
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 4.1e-74 282.3 230 63.5
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 5.4e-74 282.0 250 60.8
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 7.0e-74 281.6 213 65.3
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 7.0e-74 281.6 215 67.0
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 2.0e-73 280.0 251 59.8
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 2.0e-73 280.0 215 66.5
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 4.5e-73 278.9 229 61.6
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 4.5e-73 278.9 233 62.2
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 1.7e-72 276.9 213 67.1
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 5.0e-72 275.4 218 66.1
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 1.1e-71 274.2 216 64.4
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 2.5e-71 273.1 236 61.4
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 4.2e-71 272.3 250 56.8
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 4.2e-71 272.3 194 70.6
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 7.2e-71 271.6 252 57.5
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 7.2e-71 271.6 232 61.6
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 1.2e-70 270.8 233 60.5
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 4.7e-70 268.9 212 64.2
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 8.0e-70 268.1 199 67.8
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 2.3e-69 266.5 218 64.2
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 3.0e-69 266.2 237 60.8
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 4.0e-69 265.8 232 60.3
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 5.2e-69 265.4 224 62.1
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 5.2e-69 265.4 236 58.9
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 5.2e-69 265.4 236 58.9
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 8.9e-69 264.6 243 57.6
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.2e-68 264.2 245 57.6
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 1.2e-68 264.2 244 57.4
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 4.4e-68 262.3 236 59.3
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 5.7e-68 261.9 249 56.2
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 2.2e-67 260.0 224 61.6
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 6.3e-67 258.5 220 62.3
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 1.1e-66 257.7 206 63.6
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.4e-66 257.3 210 64.8
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.4e-66 257.3 243 56.8
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.4e-66 257.3 244 57.0
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 1.4e-66 257.3 217 61.3
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 1.8e-66 256.9 222 59.0
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 2.4e-66 256.5 219 60.7
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 3.2e-66 256.1 242 56.6
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.1e-66 255.8 247 55.1
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 4.1e-66 255.8 223 60.5
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 1.2e-65 254.2 228 57.0
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.2e-65 254.2 218 61.0
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 2.0e-65 253.4 241 56.8
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 2.7e-65 253.1 218 60.6
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 3.5e-65 252.7 164 75.0
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 5.9e-65 251.9 242 56.6
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 1.0e-64 251.1 206 63.6
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 1.0e-64 251.1 214 59.8
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 1.0e-64 251.1 252 54.0
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 1.3e-64 250.8 258 53.5
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 3.9e-64 249.2 249 57.0
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 3.9e-64 249.2 255 53.3
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 8.6e-64 248.1 199 65.8
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 1.1e-63 247.7 216 57.9
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 1.1e-63 247.7 216 57.9
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 2.5e-63 246.5 210 61.9
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 4.3e-63 245.7 209 60.8
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 7.3e-63 245.0 258 54.3
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 9.5e-63 244.6 215 57.2
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 1.2e-62 244.2 244 53.3
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 1.6e-62 243.8 206 62.6
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 2.1e-62 243.4 245 55.1
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 2.8e-62 243.0 213 57.7
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 4.7e-62 242.3 255 52.2
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 8.0e-62 241.5 211 60.2
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 1.0e-61 241.1 211 57.8
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.0e-61 241.1 219 56.2
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 1.4e-61 240.7 243 55.6
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 1.8e-61 240.4 252 51.6
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 8.9e-61 238.0 194 63.4
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 1.2e-60 237.7 241 54.4
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.5e-60 237.3 228 54.8
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 5.8e-60 235.3 250 52.0
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 1.3e-59 234.2 244 52.5
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 1.1e-58 231.1 239 51.5
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.4e-58 230.7 244 51.2
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 4.1e-58 229.2 233 53.2
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 7.0e-58 228.4 223 55.2
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 9.2e-58 228.0 238 51.7
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.2e-57 227.6 244 50.8
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.6e-57 227.3 251 50.6
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 6.0e-57 225.3 234 51.7
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 7.8e-57 224.9 187 63.1
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 2.3e-56 223.4 228 51.3
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.9e-55 220.3 203 58.6
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 3.1e-53 213.0 157 65.0
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 4.0e-53 212.6 193 56.0
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 5.2e-53 212.2 244 48.0
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 6.8e-53 211.8 169 62.7
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.2e-52 211.1 191 56.5
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 1.5e-52 210.7 217 53.0
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 2.2e-51 206.8 224 51.3
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 4.9e-51 205.7 182 61.0
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 8.3e-51 204.9 212 50.0
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 1.1e-50 204.5 255 44.3
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 2.4e-50 203.4 267 45.7
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 9.2e-50 201.4 236 50.4
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 5.6e-47 192.2 243 49.0
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 2.3e-45 186.8 169 60.4
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 5.2e-45 185.7 162 61.7
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 9.9e-44 181.4 177 51.4
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 5.6e-39 165.6 169 49.1
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 5.2e-37 159.1 196 48.5
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 4.4e-36 156.0 118 61.9
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 1.7e-35 154.1 121 63.6
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 4.2e-34 149.4 126 56.3
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 4.2e-34 149.4 167 47.9
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 1.5e-31 141.0 126 56.3
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 2.5e-31 140.2 135 54.1
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 3.8e-27 126.3 175 41.7
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 3.6e-22 109.8 189 38.6
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.2e-17 94.7 130 42.3
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 1.0e-16 91.7 131 43.5
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 1.5e-15 87.8 81 60.5
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 1.5e-15 87.8 144 41.0
BcaC02g09844 Brassica carinata HOM05D005088 ORTHO05D017652 9.3e-10 68.6 85 48.2
C04p35970 Brassica napus HOM05D005088 ORTHO05D017652 6.0e-09 65.9 84 47.6
BolC4t25202H Brassica oleracea HOM05D005088 ORTHO05D017652 6.0e-09 65.9 84 47.6
Sc09g0007140 Simmondsia chinensis HOM05D005088 ORTHO05D389638 5.7e-07 59.3 41 65.9


User provided reference genes

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